Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d014337_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:5:41302348:41316988:1 gene:Zm00001d014337 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription initiation factor IIF%2C alpha subunit

Sequence

ATGGCACGCTCCCGTGCCCGCTGCCTCGTCTGCTCCGCGCCCATCACCAGGCTCATCCGG
GAATATAATGTACGAGCTAATTCTGTTATGGATAAGACATACTCTATTGGACGATTTGTC
ACTGGTTTACCTCCTTTCTCGAAAAAGAAGAATGCCGAGAACAAGTGGTCTCTCCATAAG
GAGGGTCTGCAAGGCCGTCAGATAGCCGAGAATATGCGGGAAAAATACAACAAGAAACCA
TGGATTTTGGAAGACGAAACAGGCCAATATCAGTATCAAGGTCAAATGGAAGGATCACAG
TCAGCTACAGCTACATATTATTTGTTAATGAGGCACGGCAAGGAATTTAATGCATATCCT
GCTGGCTCTTGGTTTAATTTCAGTAAAATTGCACAGTACAAACAATTGACACTGGAGGAG
GCTGAAGAAAAGATGAATAAGAGGAAGACCAGTGCAACTGGTTATGAACGCTGGATGATG
AAAGCAGCGGCAAATGGACCAGCTGCCTTTGGTTCAGACATGAAGAAGCTTGAGGCCACA
AATGGTGGGGAAAAAGAAAGTGCTCGTCCTAAGAAAGGAAAAAATAATGAAGAGGGTAAT
AATTCTGATAAGGGTGAGGAGGATGAAGAAGAGGAAGCAACACGCAAGAATAGACTTGGA
CTAACTAAAAAGGGCATGGATGATGATGAGGAAGGTGGAAAAGATCTAGATTTCGATTTG
GATGATGAAATTGAGAAAGGTGATGACTGGGAGCATGAAGAAACATTCACTGACGATGAT
GAGGCTGTAGACATTGATCCAGAGGAACGGGCAGATTTAGCTCCTGAAATTCCTGCTCCA
CCTGAAATCAAGCAGATGAAGAATAGCCACTGTCACTTGTGGCCGTGGACATACTGCTTG
TCACAGTTGTGCTTGGCCAACTCACTAAGGAGAGGCAATGGACACTCTCAACATGCAAAA
AGGAAGAAGAGAAGAGCTCCATTACATTCTTTGTAG

Peptide Sequence

PEP ID

Zm00001d014337_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:5:41302348:41316988:1 gene:Zm00001d014337 transcript:Zm00001d014337_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription initiation factor IIF%2C alpha subunit

Sequence

MARSRARCLVCSAPITRLIREYNVRANSVMDKTYSIGRFVTGLPPFSKKKNAENKWSLHK
EGLQGRQIAENMREKYNKKPWILEDETGQYQYQGQMEGSQSATATYYLLMRHGKEFNAYP
AGSWFNFSKIAQYKQLTLEEAEEKMNKRKTSATGYERWMMKAAANGPAAFGSDMKKLEAT
NGGEKESARPKKGKNNEEGNNSDKGEEDEEEEATRKNRLGLTKKGMDDDEEGGKDLDFDL
DDEIEKGDDWEHEETFTDDDEAVDIDPEERADLAPEIPAPPEIKQMKNSHCHLWPWTYCL
SQLCLANSLRRGNGHSQHAKRKKRRAPLHSL

Transcript Sequence

Transcript ID

Zm00001d014337_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:41302348:41316988:1 gene:Zm00001d014337 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription initiation factor IIF%2C alpha subunit

Sequence

GGATCTCTACGGCACGGGGTGCAAGCACACCACTCTCTGCAGTGACTGCGGGAAGTCCAT
GGCACGCTCCCGTGCCCGCTGCCTCGTCTGCTCCGCGCCCATCACCAGGCTCATCCGGGA
ATATAATGTACGAGCTAATTCTGTTATGGATAAGACATACTCTATTGGACGATTTGTCAC
TGGTTTACCTCCTTTCTCGAAAAAGAAGAATGCCGAGAACAAGTGGTCTCTCCATAAGGA
GGGTCTGCAAGGCCGTCAGATAGCCGAGAATATGCGGGAAAAATACAACAAGAAACCATG
GATTTTGGAAGACGAAACAGGCCAATATCAGTATCAAGGTCAAATGGAAGGATCACAGTC
AGCTACAGCTACATATTATTTGTTAATGAGGCACGGCAAGGAATTTAATGCATATCCTGC
TGGCTCTTGGTTTAATTTCAGTAAAATTGCACAGTACAAACAATTGACACTGGAGGAGGC
TGAAGAAAAGATGAATAAGAGGAAGACCAGTGCAACTGGTTATGAACGCTGGATGATGAA
AGCAGCGGCAAATGGACCAGCTGCCTTTGGTTCAGACATGAAGAAGCTTGAGGCCACAAA
TGGTGGGGAAAAAGAAAGTGCTCGTCCTAAGAAAGGAAAAAATAATGAAGAGGGTAATAA
TTCTGATAAGGGTGAGGAGGATGAAGAAGAGGAAGCAACACGCAAGAATAGACTTGGACT
AACTAAAAAGGGCATGGATGATGATGAGGAAGGTGGAAAAGATCTAGATTTCGATTTGGA
TGATGAAATTGAGAAAGGTGATGACTGGGAGCATGAAGAAACATTCACTGACGATGATGA
GGCTGTAGACATTGATCCAGAGGAACGGGCAGATTTAGCTCCTGAAATTCCTGCTCCACC
TGAAATCAAGCAGATGAAGAATAGCCACTGTCACTTGTGGCCGTGGACATACTGCTTGTC
ACAGTTGTGCTTGGCCAACTCACTAAGGAGAGGCAATGGACACTCTCAACATGCAAAAAG
GAAGAAGAGAAGAGCTCCATTACATTCTTTGTAGTAGTAGTAGGATAGTTTAGTTTGGGA
GTTACCGGGAGTCGAGTTAGTCTCAACTTTTTTAACTTAGTCTTTGGAAGTCTGTTATAG
CTCTTGTATCCTTTTTTTTAATCTTTGTAAGACTTTAGGTTATCAATCATATATCTAGTG
TGTGTGTTAGAATAATTGTATTGGTTGGGGCAGAGGTGGAGAAGGTAATCCTGTACATGG
TCTACTTTCAACTGCAAACCACATGAAACC