Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d014325_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:41050430:41054227:1 gene:Zm00001d014325 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-binding EF-hand family protein
Sequence	ATGGAGCAGCAGCAGCATCAGGAGGTGAGGAGGAACAGGAAAGGCGTGCTGCAGGTGCAG GACGGCTCTGAGATCCGGGCTCTCGTGGAGAACAAGGCGGAGTTCGCTAGGTTCGTCGAC GACAGGTTCCGGAAGCTCGACGCCGATGGCGACGGGAGGCTGTCGGTGAAAGAGCTCCAG CCGGCCGTCGCTGACATCGGTGCCGCCATCGGGCTGCCGGCCAGAGGGTCGTCGCCGCAG GCGGACCACATCTACGCGGAGGTCCTAAACGAGTTCACTCGCGGGAAGCAAGAGTCGGTG GGCAAGGCCGAGTTCCAGCGCGTGCTGTCCGACATCCTCCTCGGGATGGCGGCCGGGCTG AAGAGGGACCCGATCGTCATCCTCAGGATAAACGGGGAGGACCTGAGCGAGTTCGTGGAG AGCCCGAGGTACGAGCCTGAAGCCGTGGCCATATTTTCGCAGGCCGTGGGGGGCCCTACC AATACCAACGACGCCACGCTGCGCCAGTGCCTGCTGGCCGCTGTCGGAGAGCTCACCATC GACCACGGCATGCCACCGGCTTCTGATCCCTGGGTCATGGAGAACGTCGTGGAGCCCGCG TTCCAAGAGCTGCCTGCTAGTGCTACCCAGCAGCTCGACCTCGACCAGCCTGTTCCCTCC CAGGAAGCCTTTCTCCAGGAATTCAGGAGACTTTTGGGCGCCATCACCCTGAGACTGCGA CAGCACCCTGTGATCGTCGCCCATACCGAGAACAACTTCGACGGGAGTGGCGTCAGGAGG CTACTGTCGAACAAGTTCGAGTTCGACAAGCTGCTGGACTCTGTGTGGAGAGAGGTCCCG AAAGAACGCAAGGACAAGCAGGCGTCGAAAGAGTACCTCCGGATCGCGCTCGACAGGATC GCCGATTCGGCGGGCCTGCCGCCTCTGGGGGCCGTCGGTCAGGTGGATGCCGTGGTGAAC GAGGCGTTCAAGATGGCGAAAGCCGACGACCTCAGGGCGGTGGACGAGGCGGAGTTCAAG AAGCTGCTGACCGAGGTTCTTGGGGCCGTCATGCTGCAGCTGGACGCCAGCCCCGTCGCT GTCTCCACCAACACCGTCGTCCACGAGCCCATGTGCACCTCCTCCTCCTCCTCCGCGCTG CTGTCGCCCACGCCGCTGTCTCCGATGGTGTCCTCTCCTGCTAGTGAATAG

Peptide Sequence

PEP ID	Zm00001d014325_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:41050430:41054227:1 gene:Zm00001d014325 transcript:Zm00001d014325_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-binding EF-hand family protein
Sequence	MEQQQHQEVRRNRKGVLQVQDGSEIRALVENKAEFARFVDDRFRKLDADGDGRLSVKELQ PAVADIGAAIGLPARGSSPQADHIYAEVLNEFTRGKQESVGKAEFQRVLSDILLGMAAGL KRDPIVILRINGEDLSEFVESPRYEPEAVAIFSQAVGGPTNTNDATLRQCLLAAVGELTI DHGMPPASDPWVMENVVEPAFQELPASATQQLDLDQPVPSQEAFLQEFRRLLGAITLRLR QHPVIVAHTENNFDGSGVRRLLSNKFEFDKLLDSVWREVPKERKDKQASKEYLRIALDRI ADSAGLPPLGAVGQVDAVVNEAFKMAKADDLRAVDEAEFKKLLTEVLGAVMLQLDASPVA VSTNTVVHEPMCTSSSSSALLSPTPLSPMVSSPASE

Transcript Sequence

Transcript ID	Zm00001d014325_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:41050430:41054227:1 gene:Zm00001d014325 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-binding EF-hand family protein
Sequence	ACACAAGAACACATCGCCTATCCAGTATCCACCGACCTAGCTCATCGCGACCAAAGAAAA GGACACAGCAACTCAGCAAGACCCCCATCTTCCATAGCTCTAGCTACTAGCTACTAGTTT CAGGCCTGCGGCTCGTGAACACCTCATCTTTTTAGCCACTTTTGCCACCACCGACGACGA CCGATCGATCAGCTAGCAGCTAGGCCATCCCGCGCGCGTCACGAGGAACCCACGGCCGGC GTCGCCATTGTTGTCGCTGTAACTTGCAAGCTTTCCCTAGCATCGGCCCTTTTCCCCTTC CTTTTCCCTCGCTCGTCCTCGTGCTAGCTGTGTATAAAAGCGCGTCGCTAGCGCGCTCAT GGAGCAGCAGCAGCATCAGGAGGTGAGGAGGAACAGGAAAGGCGTGCTGCAGGTGCAGGA CGGCTCTGAGATCCGGGCTCTCGTGGAGAACAAGGCGGAGTTCGCTAGGTTCGTCGACGA CAGGTTCCGGAAGCTCGACGCCGATGGCGACGGGAGGCTGTCGGTGAAAGAGCTCCAGCC GGCCGTCGCTGACATCGGTGCCGCCATCGGGCTGCCGGCCAGAGGGTCGTCGCCGCAGGC GGACCACATCTACGCGGAGGTCCTAAACGAGTTCACTCGCGGGAAGCAAGAGTCGGTGGG CAAGGCCGAGTTCCAGCGCGTGCTGTCCGACATCCTCCTCGGGATGGCGGCCGGGCTGAA GAGGGACCCGATCGTCATCCTCAGGATAAACGGGGAGGACCTGAGCGAGTTCGTGGAGAG CCCGAGGTACGAGCCTGAAGCCGTGGCCATATTTTCGCAGGCCGTGGGGGGCCCTACCAA TACCAACGACGCCACGCTGCGCCAGTGCCTGCTGGCCGCTGTCGGAGAGCTCACCATCGA CCACGGCATGCCACCGGCTTCTGATCCCTGGGTCATGGAGAACGTCGTGGAGCCCGCGTT CCAAGAGCTGCCTGCTAGTGCTACCCAGCAGCTCGACCTCGACCAGCCTGTTCCCTCCCA GGAAGCCTTTCTCCAGGAATTCAGGAGACTTTTGGGCGCCATCACCCTGAGACTGCGACA GCACCCTGTGATCGTCGCCCATACCGAGAACAACTTCGACGGGAGTGGCGTCAGGAGGCT ACTGTCGAACAAGTTCGAGTTCGACAAGCTGCTGGACTCTGTGTGGAGAGAGGTCCCGAA AGAACGCAAGGACAAGCAGGCGTCGAAAGAGTACCTCCGGATCGCGCTCGACAGGATCGC CGATTCGGCGGGCCTGCCGCCTCTGGGGGCCGTCGGTCAGGTGGATGCCGTGGTGAACGA GGCGTTCAAGATGGCGAAAGCCGACGACCTCAGGGCGGTGGACGAGGCGGAGTTCAAGAA GCTGCTGACCGAGGTTCTTGGGGCCGTCATGCTGCAGCTGGACGCCAGCCCCGTCGCTGT CTCCACCAACACCGTCGTCCACGAGCCCATGTGCACCTCCTCCTCCTCCTCCGCGCTGCT GTCGCCCACGCCGCTGTCTCCGATGGTGTCCTCTCCTGCTAGTGAATAGGAGAAGACTTG ACAACTGAGTGAGGAGATGACGATGGAGATGGATCACACCGGCCCGTCACGCTCAGTTTT TCTTTTTCTGTGTCACCGGGTACTAATAACATGTTAGGAACTTGTGGGTTTTTATGTCGC TTATAACTTCTCGTCGAAATAAGGCTTTTCTAAGCTTTTGAGTAGTTGTGAACATTTTAA GCAATCGTGAACAGATGGTGGTTGATATGTGTCCAGTATGGTTTTTTAATTGTG