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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d014285_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:39448633:39449484:-1 gene:Zm00001d014285 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aquaporin PIP2-2
Sequence

ATGGATACTTGTCATCAATCCATAGAGACCGCAGATGGCAAGAAGGACTACAGTGACCCT
GTCCCAGCACCATTCGTGAACGCCGGCGAGCTGGGCAAGTGGTCCCTGTACCGCGCCGTC
ATCGCCGAGTTCGTGGCCACGCTGCTCTTCGTGTACGTCACGCTGGCCACCGTCATCGGG
CACAAGCGCGAGGCCGAGTCCCAGCCGTGCGGCAGCGTCGGCGTGCTGGGCATCGCCTGG
TCCTTCGGCGGCATGATCTTCGTGCTCGTCTACTGCATCGCCGGCATCTCCGGCGGCCAC
ATTAACCCGGCGGTCACCTTCGGCCTGCTGCTGGCGCGCAAGCTGTCGCTGGTGCGCGCC
GCGCTCTACGTGGTCGCGCAGTGCCTGGGCGCCATGTGCGGCGCCGGCCTCGTCAAGGCC
TTCCACGGCGCCCACTGGTACCTTCGCTACGGCGGCGGAGCCAACGAGCTCGCCGCCGGC
TACTCCAAGGGAGCCGGTCTGGGCGCCGAGATCGTGGGCACCTTCGTCCTCGTCTACACC
GTGTTCTCGGCCACCGACCCCAAGCGCAAGGTCAGGGATTCGCACGTCCCGGTCCTGGCG
CCGCTGCCCATCGGATTCGCGGTGTTCATGGTGCACCTGGCCACCATCCCCGTCACCGGC
ACGGGCATCAACCCGGCAAGGAGCCTGGGGCCGGCCGTTGTGTACAACCAGCGAAAGGCG
TGGGAGGATCACTGGATATTCTGGGTCGGCCCACTCATCGGCGCCGCCGCCGCCATGCTC
TACCACCAGTTGGTCCTCCGCGCCGGCGCAGCCAAGGCCTTCGCGTCCTTTCGCAACAAC
CAGCACTTCTGA

Peptide Sequence

PEP ID

Zm00001d014285_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:39448633:39449484:-1 gene:Zm00001d014285 transcript:Zm00001d014285_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aquaporin PIP2-2
Sequence

MDTCHQSIETADGKKDYSDPVPAPFVNAGELGKWSLYRAVIAEFVATLLFVYVTLATVIG
HKREAESQPCGSVGVLGIAWSFGGMIFVLVYCIAGISGGHINPAVTFGLLLARKLSLVRA
ALYVVAQCLGAMCGAGLVKAFHGAHWYLRYGGGANELAAGYSKGAGLGAEIVGTFVLVYT
VFSATDPKRKVRDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGPAVVYNQRKA
WEDHWIFWVGPLIGAAAAMLYHQLVLRAGAAKAFASFRNNQHF

Transcript Sequence

Transcript ID

Zm00001d014285_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:39448633:39449484:-1 gene:Zm00001d014285 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aquaporin PIP2-2
Sequence

ATGGATACTTGTCATCAATCCATAGAGACCGCAGATGGCAAGAAGGACTACAGTGACCCT
GTCCCAGCACCATTCGTGAACGCCGGCGAGCTGGGCAAGTGGTCCCTGTACCGCGCCGTC
ATCGCCGAGTTCGTGGCCACGCTGCTCTTCGTGTACGTCACGCTGGCCACCGTCATCGGG
CACAAGCGCGAGGCCGAGTCCCAGCCGTGCGGCAGCGTCGGCGTGCTGGGCATCGCCTGG
TCCTTCGGCGGCATGATCTTCGTGCTCGTCTACTGCATCGCCGGCATCTCCGGCGGCCAC
ATTAACCCGGCGGTCACCTTCGGCCTGCTGCTGGCGCGCAAGCTGTCGCTGGTGCGCGCC
GCGCTCTACGTGGTCGCGCAGTGCCTGGGCGCCATGTGCGGCGCCGGCCTCGTCAAGGCC
TTCCACGGCGCCCACTGGTACCTTCGCTACGGCGGCGGAGCCAACGAGCTCGCCGCCGGC
TACTCCAAGGGAGCCGGTCTGGGCGCCGAGATCGTGGGCACCTTCGTCCTCGTCTACACC
GTGTTCTCGGCCACCGACCCCAAGCGCAAGGTCAGGGATTCGCACGTCCCGGTCCTGGCG
CCGCTGCCCATCGGATTCGCGGTGTTCATGGTGCACCTGGCCACCATCCCCGTCACCGGC
ACGGGCATCAACCCGGCAAGGAGCCTGGGGCCGGCCGTTGTGTACAACCAGCGAAAGGCG
TGGGAGGATCACTGGATATTCTGGGTCGGCCCACTCATCGGCGCCGCCGCCGCCATGCTC
TACCACCAGTTGGTCCTCCGCGCCGGCGCAGCCAAGGCCTTCGCGTCCTTTCGCAACAAC
CAGCACTTCTGA