Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d014275_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:5:38929696:38950577:1 gene:Zm00001d014275 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGCTGGACCTGACACTTCTGGATAAACTTGTACATGAGTATTGTGTATACAGGGGA
ATAGTTGAAGGCAGTTCACATGTTCTTTCTGGAACTGCTGACTTGAAATGTAATCAAAAT
AATGATGTTAATAATGAAACACAGCTTTATTGTGAAATGACCAACAATCAGAATGGACAT
TGTAGCACCAGCGGTATCAATCTTGACGATTCTTGGTCCAGGAGGTTGCATAGGGATAGA
CATATTATGCCTGGGCAGCAAAGACGAAAGAGATGGAGAGGACGGTTAGATGATCTTGAT
TATGCTTGTGATGCGTTGTTGGATCCCAGTAAGCATGATAGTTTGTCTCCTACTCTTGAT
ATGGACGAAGATACTATGGTAGAAAAACAGGACTTGGTGGAAAATTTTAATTTATCTGAT
AAACACATGGAAGATCAGAAATATGAAATTATTTTGGAGATGCGGGACCTCACACGAAAA
GGGATGGCTTCCAAAGTTGTTGAGGAAATAAGCAGTATAGATCCTGATTTCTTTCAACAG
AACCCTATTCTCCTGTTTCAGCTGAAACAGGTTGAATTTCTTAAGCTGGTAGCTGCCGGT
GATCATGTATCTGCTCTCAAGGTTGCATCAACTTATCTGGGACCACTTGCTGCCAATAAC
GAAGCTCTACTGAAGCCCTTGAAGGAAACATTGGTGACACTAATTCAACCCAATGAAGAT
GTAGTCATGAATGCATTGTCATTGCCAGTACTTGCCAGTTCTGTCCAGGTTGCAATGAGC
AGAAGGCTTGGTATTGAAGAGCCTCAGTTAATGAAGATAGTCAGAACAACAATCCATACA
CACACTGAATGGTTTAAGCTTCAGATGTGCAAGGACCGTTTTGAGCACTTATTGAAGATT
GATTCTCTAAAAGAGGTTGATCCATCATTGGGGAGTCACCGTAAGTCCAAGGTCCTTACA
GATGAATGTGCAAATGGATCATCTCAAATGACAACATGTTCAAGTGGCAAGGTGCCAGAT
GAAGGTAGTAGCCCTCAAGTCTCATCAGAAGTTGCCTGTGATGAAAATGCTATACTGAAG
GTTATGGAATTCCTTGCGTTGCCAAGGGCGGACGCCATCCAACTCCTCATGCAGTACAAT
GGAAATGCAGAAGCAGTCATCCAACAGATCTTCCAATAG

Peptide Sequence

PEP ID

Zm00001d014275_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:5:38929696:38950577:1 gene:Zm00001d014275 transcript:Zm00001d014275_T003 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKLDLTLLDKLVHEYCVYRGIVEGSSHVLSGTADLKCNQNNDVNNETQLYCEMTNNQNGH
CSTSGINLDDSWSRRLHRDRHIMPGQQRRKRWRGRLDDLDYACDALLDPSKHDSLSPTLD
MDEDTMVEKQDLVENFNLSDKHMEDQKYEIILEMRDLTRKGMASKVVEEISSIDPDFFQQ
NPILLFQLKQVEFLKLVAAGDHVSALKVASTYLGPLAANNEALLKPLKETLVTLIQPNED
VVMNALSLPVLASSVQVAMSRRLGIEEPQLMKIVRTTIHTHTEWFKLQMCKDRFEHLLKI
DSLKEVDPSLGSHRKSKVLTDECANGSSQMTTCSSGKVPDEGSSPQVSSEVACDENAILK
VMEFLALPRADAIQLLMQYNGNAEAVIQQIFQ

Transcript Sequence

Transcript ID

Zm00001d014275_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:38929696:38950577:1 gene:Zm00001d014275 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCTACACGTACACACACTGCCCTCCACCGACTTCGTCGTGTCGTCTCAACGACATCCACA
TCCACCCGAGTCCGACCACCCCAACAGTTCACCCCCTAATCCCCGCGCCACCGCCCGCTA
CTGCCTCGCCGCCGATGGACTGCCCGCAGCTGAATTCTCCTTTGCCGGTGAACTGGGACG
CGCTTGACGCCCTTGTCCTCGACTTCGCGAGATCCGACCGCCTTGTGGCCCCTCCCACTG
CATCCGCCTCCCCCTCGCCGCCGTCTTCACCCTCCTCTACTACCACCGTCACCTCCTCGG
CGCCATCCTCGTCTTCGTTGTCCTCTTCCTCGTCCTACAGGTCGCGTCTCCTTATCCGCT
GCGCCCGCCGCGCGATCGAGCTGGGAGACGTCGACGCGGCCCTCGCGCTCCTCCGGGCCC
GCGCGCCCGCGGCGCTCGCCGACCACCGCCTCCTCTTCCACCTCCACAAGCAGAGGTTTG
TGGAGCTGGTGAGGAGGGGCACGGAGGCGGACAGGGACGCGGCGCTCGATTGCCTCCGCA
CGGCGCTCGCGCCCTGTGCGCTCGACGCCTACCCGGAAGCTTACGAGGAGTTCAAGCATA
TAATGCTTGTGTTGATATATGACAAAGAGGATCAATCTTCCCCCGTTGTTAATGAGTGGT
CTATAAAGAGGAGGTTTGAACTTGCTGGTTTACTATCATCTATACTAAGAGCTCATTTAG
AAGCTTATGACCCTGTTCTTTCGCTGACGCTAAGATACTTAATAAGCATTCACAAGGCAT
TTTGCACGCGCCAAGGAATTCAATCACCTATATCTGATCTCACTGAACGACTGTTATTTG
AGGATCGTGACCCCCCTGTGGTTCCTCCGGAATGCTCACTCGAAGCACCATCATTTGATG
AGGTTGATGTTCAAGCCCTAGCGCATGCTGTTGAGTTGACAAGACAAGGTGCTGTGGATA
GCTTGAAGTTTGCAAAAGGACATTTATACCAAGCTTTTCAGGTTGTATTATAATTACAAT
TTTTTGGTATAAAACTATTTAACCATGACCATAGACTTTTTGTTGCCATTTGTGCTAATT
TCTTAACTGAAAATGATCTTGTTAATTGCTTGATACTTTTTAAGCACTGCTATAAGTGTT
TAGAGATACTACCTCCATACAGAAAAGGATACAATTCTAGCTCTGCTCCTAGTCAAGATT
TTAAATTTTGACCAAGTTTACAGAAAAGAGTATCAATATCTATAACACAAAATAAGTATC
ATGGTGAATATAATGACACTATTTGGAACCATAAATATTGATATATTTTTTGTATAAACT
TGGTCAAACCCAGAAAGTTTGACTCAATACTATGCTAAAATTGCATTCTTTTCTGGACAG
AGGGAGCACACAATTATTTGGTCTTCATTCAAAAATTTGGCAATAGGCATTTCCTTTTCT
ATGCTGTGAATCCAAATTTCTTTCCTCCCAAAACTTACTTTCTGCTGAACTTCTCCCCCT
GTCACAAGAGTCAAGTTTCAAGCTTCTAATGATATATACCAGCCATAACTGGCTGCTTGA
ATAAAAAAACGAAGTTTTCGAATGCACCACACCGAACTGGTCATTTATGAGGAGTTTCAC
CACAGAAAATCACAGTGGAGACTCCATGTCTTCATAAAAGACATTACTTTGTTGTTTCCA
TGAAGGCAAATCCTATCTAAACTTGCCATTGATTTTTGCATCTTTTCATTTTCATGACTG
GCCCTGTAGTGCTTTTTTGTTGTTTTATTTTCCCATTTTCAGTCCCTTCCATCACATTAA
CATGGTTTCACTATTGATGCCATCACCATACTCTCATATATATAAATACTAAATTACCCT
AATTTCCATTGTAACACCAGGTACTATCTTGCTTACCCGTGCTGCTTTCTGTATCTTACC
TACCAGTATCTCAGCATTGACAGCTTTTCTCTGACAAGTGTAGTCTTGCTGCACTTATAC
AACGGAGTTATTGGTGCAGGGGACCTTACTTTTTTTTCTTGAACGCGCAAGAGAGTTGCA
CATCATTTAAATAGAGAAGAAAAAGGTCCAAAATGGACCAAGGTACAAAGCCTAAGAAGG
CAAACACACCCACACACAATCTGCCCTGCAGTAATACTGCAGCCTCCACTAGATCTGAGA
AATCAGAGGGAGGCCACAGCAAGAAAAACTGCAGGGAGACTCCACACTCCACTAAAACTA
TGCCCTGGCCGTATTAAGGGCGACATCCAGGCCTAAATTCTCAAGATGTTTAGCTCCAGC
CTTATTCCAACATACCAACTCATCTAAGAAAACACATCGAACTGTGCTTAAAGAAGGGTT
CTCTCCATCGAAGACTGCTTTCTCTTTTTTTTTTCTTTTTTTTCCTCTCTTTTTCTCACC
CCTCTTTTTGTATAGCCGTTGTTATTGGTCTTCTTTAGACCTTTCTCTCTACTTAATATA
TAATGATGCGCAGTTCTCTTGCGTGTTCGAGAAGACTGCCTTATTACGGTGAATCCATAG
GCACCAGGCCCCCAGAATGATGACGCTGTTCATTACCCTTTCTCTTGCTTCTGTGCACCT
TCTTACCTACCTTTCTCCACCAATCTGCAAAGGAGATCTCAGATCTCATATCGAGACGGA
GAGAGATTACCAAACCCAAAAGCGAAAGGATGGTATGCCAAATCCATGCGTGTCTGGTGT
ACTATATTATTAGACCTGATTGAGAACATGAAATCAAAATAGGCCACCCCTTTTGTCCTG
AAACACAAATCCATGCCTGCCATGAGGCCATATTACCACTTTTCATTTCCCAACACCTCC
TGCCTCTTGGGCTTACAATTGGCCAGCTTATCATGTCCAATTTTCAAAGGTGTGCAGTTG
ACATGTCGTACTTCGGATTTTTCTTTGTTTGATCGTGTCTGATATGCTCACTGGATTGCT
GGGAATTATACCTTTCTGAGAGTTGTTTTAGCATTTGTATCAGCGTTTGGGGTCTACTTC
TGGTTTTGACTCAAGTTGATTCTTTCTGTTACACACACATGTTCTGTAATGCATCCCTGT
TTCTGTTCTGCACAGCCATCTGTGGTTCACCAATATATATGCATGCTTGTTAGGTTTGTG
TAAGATGATCATCATGAAATAGGGAATGAAACAGCATTACAACAGGGTAAATAAGTTGGG
AGTCCTGTTTTCCTCTTTATAATTATATTTGAAGGCTATATATCTCCTGGCCCAGTGTTG
AGGGGCCAAAAGAGTACATTACATTTCATGCCTTTTTTCATTTCATTGATTAAATGTAAG
GAAATAATGTATGTCTTGGTCTTCATTTGTTGGATTGTTATTTGATATGGCATGAATTTG
ATTATGTTTCATCAAGTGATCCCTTATTGCTTCCTTGGTTTGATGCTAAGCTTATCTGTG
TAAAAATGCCAGAACGAATTGTGCCGGATGAAGCTGGACCTGACACTTCTGGATAAACTT
GTACATGAGTATTGTGTATACAGGGGAATAGTTGAAGGCAGTTCACATGTTCTTTCTGGA
ACTGCTGACTTGAAATGTAATCAAAATAATGATGTTAATAATGAAACACAGCTTTATTGT
GAAATGACCAACAATCAGAATGGACATTGTAGCACCAGCGGTATCAATCTTGACGATTCT
TGGTCCAGGAGGTTGCATAGGGATAGACATATTATGCCTGGGCAGCAAAGACGAAAGAGA
TGGAGAGGACGGTTAGATGATCTTGATTATGCTTGTGATGCGTTGTTGGATCCCAGTAAG
CATGATAGTTTGTCTCCTACTCTTGATATGGACGAAGATACTATGGTAGAAAAACAGGAC
TTGGTGGAAAATTTTAATTTATCTGATAAACACATGGAAGATCAGAAATATGAAATTATT
TTGGAGATGCGGGACCTCACACGAAAAGGGATGGCTTCCAAAGTTGTTGAGGAAATAAGC
AGTATAGATCCTGATTTCTTTCAACAGAACCCTATTCTCCTGTTTCAGCTGAAACAGGTT
GAATTTCTTAAGCTGGTAGCTGCCGGTGATCATGTATCTGCTCTCAAGGTTGCATCAACT
TATCTGGGACCACTTGCTGCCAATAACGAAGCTCTACTGAAGCCCTTGAAGGAAACATTG
GTGACACTAATTCAACCCAATGAAGATGTAGTCATGAATGCATTGTCATTGCCAGTACTT
GCCAGTTCTGTCCAGGTTGCAATGAGCAGAAGGCTTGGTATTGAAGAGCCTCAGTTAATG
AAGATAGTCAGAACAACAATCCATACACACACTGAATGGTTTAAGCTTCAGATGTGCAAG
GACCGTTTTGAGCACTTATTGAAGATTGATTCTCTAAAAGAGGTTGATCCATCATTGGGG
AGTCACCGTAAGTCCAAGGTCCTTACAGATGAATGTGCAAATGGATCATCTCAAATGACA
ACATGTTCAAGTGGCAAGGTGCCAGATGAAGGTAGTAGCCCTCAAGTCTCATCAGAAGTT
GCCTGTGATGAAAATGCTATACTGAAGGTTATGGAATTCCTTGCGTTGCCAAGGGCGGAC
GCCATCCAACTCCTCATGCAGTACAATGGAAATGCAGAAGCAGTCATCCAACAGATCTTC
CAATAGTGCTTACTGTAAATAACAAAGTATTTTGCTTGCTTTCAAACGTAATTATTTGTT
GATACTTTTCTTGCCCTGTACAGAAGATTCTGTTAGAACTAGGAGTCTGTGTTTGATGAT
CCACAGTACTTCTATGGACTTACACAGAGTAGGAATCGGTGGGATTCAGCACAGGCTAAA
CTCAACGATAAATGCAAAGATATTGATTTATACTGGTTCAGACCATTGAACAGCGTGCGT
AATATATATTATGTCTAGTTAGTTGTGTTGGATTGTTGATTATGCTTGCTTGGGTTCCTT
ACAAGTTGGATTACTCTGTCCCTCTTTATATAATCCATAAGAGAGGTTTATGAG