Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d014271_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:38630685:38632757:1 gene:Zm00001d014271 gene_biotype:protein_coding transcript_biotype:protein_coding description:Caltractin

Sequence

ATGACGGGCACGTACGAGGCCTCCGACCGTCCTCCTCCTCCCAACTCCGCCGGCTACCGG
ACCGACAAAGTCCGGCGAAAGCGGCTGACGGCGCAGAAGAGGAAAGAGATCAAGGAGGCG
TTCGACCTCTTCGACATCGACGGCTCCGGCACCATCGATGCAAGGGAGCTGAACGTCGCG
ATGAGAGCCCTTGGATTCGAGATGACACCGGAGCAAATCGGGCAGATGATCGCGGAGGTG
GACAAGGACGGCAGCGGCACCATCGACTTCGACGAGTTCGTGCACATGATGACGGACAAG
ATGGGCGAGCGGGACGCCCGGGACGAGCTCCACAAGGCGTTCCGCATCATCGACCAGGAC
GCCAACGGAAAGATCTCGGACATGGACATCCAGCGGCTGGCCATCGAGACCGGCGAGCAC
TTCACGCTGGACGAGGTCCGGGAGATGATAGAGGCCGCCGACGAGGACGGCGACGGCGAG
ATCGACCTGGAGGAGTTCATGAAGATGATGAAGCGGACAGACTTTGGCTCTGGGTTCTAG

Peptide Sequence

PEP ID

Zm00001d014271_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:38630685:38632757:1 gene:Zm00001d014271 transcript:Zm00001d014271_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Caltractin

Sequence

MTGTYEASDRPPPPNSAGYRTDKVRRKRLTAQKRKEIKEAFDLFDIDGSGTIDARELNVA
MRALGFEMTPEQIGQMIAEVDKDGSGTIDFDEFVHMMTDKMGERDARDELHKAFRIIDQD
ANGKISDMDIQRLAIETGEHFTLDEVREMIEAADEDGDGEIDLEEFMKMMKRTDFGSGF

Transcript Sequence

Transcript ID

Zm00001d014271_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:38630685:38632757:1 gene:Zm00001d014271 gene_biotype:protein_coding transcript_biotype:protein_coding description:Caltractin

Sequence

ATACGCCTTTTCTGCTGCCGCTGCATCTTCCACTCGCGTCAAGAAACGAAACCCAGCTGC
ACCAGCAACTTCTGCCAGCAGACCCAACGACCGAAGCTTTTTTTTTCTTTCTTTTCATCG
CCGCCGCTCGGGGTTCAAGGTTCAGCGCGTCCCCGAATGACGGGCACGTACGAGGCCTCC
GACCGTCCTCCTCCTCCCAACTCCGCCGGCTACCGGACCGACAAAGTCCGGCGAAAGCGG
CTGACGGCGCAGAAGAGGAAAGAGATCAAGGAGGCGTTCGACCTCTTCGACATCGACGGC
TCCGGCACCATCGATGCAAGGGAGCTGAACGTCGCGATGAGAGCCCTTGGATTCGAGATG
ACACCGGAGCAAATCGGGCAGATGATCGCGGAGGTGGACAAGGACGGCAGCGGCACCATC
GACTTCGACGAGTTCGTGCACATGATGACGGACAAGATGGGCGAGCGGGACGCCCGGGAC
GAGCTCCACAAGGCGTTCCGCATCATCGACCAGGACGCCAACGGAAAGATCTCGGACATG
GACATCCAGCGGCTGGCCATCGAGACCGGCGAGCACTTCACGCTGGACGAGGTCCGGGAG
ATGATAGAGGCCGCCGACGAGGACGGCGACGGCGAGATCGACCTGGAGGAGTTCATGAAG
ATGATGAAGCGGACAGACTTTGGCTCTGGGTTCTAGTAGTCACAGACAAGCCAATCCCAA
CATACATTGATACATACCATCGGTGAAAAATACATATCACCTAGCTACTACGCTACATAT
GACTGGAGTATTGGGATTTATTTGAGAAATAATGGCGTACACACACCACACATCATTGTG
CACTAACTACTCTAGTACGTCCTAGCTACGGGTTGTGTATTTATTTACACGTAATGAAAC
ACATACTACTATTTGTACTGTCGTTTTTCAGTAAAAACCAGTAAAAATCGATATTTTTAT
TGGTGG