Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d014255_T008
CDS Infomation

cds chromosome:B73_RefGen_v4:5:38317498:38324742:1 gene:Zm00001d014255 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription factor TFIIE alpha subunit
Sequence

ATGAACTCCATCGAGCCCTTCAACAGGCTGGTGAAGCTGGCGGCCCGCGCCTTCTACGAT
GACGTCTCAATGAAGGGCGACAACCAGCCCAAGACCTCCCGCGGGGACAACCGCGGCATG
GCCGTCGTCGTCCTGGACGCGCTCACCAGACGACCGTGGGTCCGAGAGGAAGATTTGGCT
AAAGCATTGAAGCTCCACTCGAAACAGCTGCGTCGCATTCTCCGTTTCTTTGAAGAGGAG
AAACTAGTCACAAGGGATCATCGGAAGGAGTCAGCAAAAAATGCCAAAGCACATAATGCT
GCAGCTGCTAATGACGGTCAAACAGTTGCTAAGGAGGGAGAAGAGAAAGTAAAGATGCAC
ACACATTCATACTGTTGCTTGGATTATGCTCAGATATGTGATGTTGTCAGGTATCGGATT
CACCGCATGAAAAAAAAATTGAAGGATGAATTGGACAGCAGAAATACAATTCAACACTAT
ATATGTCCTAGCTGTAATAAAAGATACTCAGCCTTTGATGCACTACAACTGGTAAGCTAC
ACGGATGAGTACTTCCATTGTGAAACTTGCAATGGTGAACTGGTTGCTGAGGATGACAAG
CTTGCTTCTGAGGAAATGGGAGATGGCGATGACAATGTTAGAAAGCGCAGGCGTGAGAAA
TTAAAGGACATGCAGCAAAGAATTGAAGTTAGTCCTCAGTTATCTTTGGAACTCTTCTAA

Peptide Sequence

PEP ID

Zm00001d014255_P008
PEP Infomation

pep chromosome:B73_RefGen_v4:5:38317498:38324742:1 gene:Zm00001d014255 transcript:Zm00001d014255_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription factor TFIIE alpha subunit
Sequence

MNSIEPFNRLVKLAARAFYDDVSMKGDNQPKTSRGDNRGMAVVVLDALTRRPWVREEDLA
KALKLHSKQLRRILRFFEEEKLVTRDHRKESAKNAKAHNAAAANDGQTVAKEGEEKVKMH
THSYCCLDYAQICDVVRYRIHRMKKKLKDELDSRNTIQHYICPSCNKRYSAFDALQLVSY
TDEYFHCETCNGELVAEDDKLASEEMGDGDDNVRKRRREKLKDMQQRIEVSPQLSLELF

Transcript Sequence

Transcript ID

Zm00001d014255_T008
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:38317498:38324742:1 gene:Zm00001d014255 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription factor TFIIE alpha subunit
Sequence

AGAGCAGTAGAGATTGACACCACGGGCACGCACGTCAGCGCCTCCACCTTCCTCCCCAGC
CGCAAGCAGAGCAAGAACCGGAGCTGGGGATCGATTCCGCGCCGCCTGATCTGCGATCGG
GACTCGATCGTGCATAATCCGAGGTTCTTCCTCTCTGTCGTCTCCGATCCAGACGGGTGT
GCCTGGTCTGCATCTTCATCCTCTGCAAGAAATCACACATCTCGTGGCGCACCTTGCATC
AGCCGCGGCCGGCACCTCTACTCTCGCCCGCCCCCTATGTCGTAAGCGCGCAATCAGAAC
TCCCGATCACCCGCACGCTGGTGCGCCAGTGTCGTCTTCGCCACCATGAACTCCATCGAG
CCCTTCAACAGGCTGGTGAAGCTGGCGGCCCGCGCCTTCTACGATGACGTCTCAATGAAG
GGCGACAACCAGCCCAAGACCTCCCGCGGGGACAACCGCGGCATGGCCGTCGTCGTCCTG
GACGCGCTCACCAGACGACCGTGGGTCCGAGAGGAAGATTTGGCTAAAGCATTGAAGCTC
CACTCGAAACAGCTGCGTCGCATTCTCCGTTTCTTTGAAGAGGAGAAACTAGTCACAAGG
GATCATCGGAAGGAGTCAGCAAAAAATGCCAAAGCACATAATGCTGCAGCTGCTAATGAC
GGTCAAACAGTTGCTAAGGAGGGAGAAGAGAAAGTAAAGATGCACACACATTCATACTGT
TGCTTGGATTATGCTCAGATATGTGATGTTGTCAGGTATCGGATTCACCGCATGAAAAAA
AAATTGAAGGATGAATTGGACAGCAGAAATACAATTCAACACTATATATGTCCTAGCTGT
AATAAAAGATACTCAGCCTTTGATGCACTACAACTGGTAAGCTACACGGATGAGTACTTC
CATTGTGAAACTTGCAATGGTGAACTGGTTGCTGAGGATGACAAGCTTGCTTCTGAGGAA
ATGGGAGATGGCGATGACAATGTTAGAAAGCGCAGGCGTGAGAAATTAAAGGACATGCAG
CAAAGAATTGAAGTTAGTCCTCAGTTATCTTTGGAACTCTTCTAAGTAAATGCCAAAATT
TACGTGCTTGGTCCAAATATTATGGAAGGAAACAAAAATGTTAGGTGTTTTCAGCATTCC
AGCCAGCTTGTGTGCTTTATTAAGTCGGTCAACCAAACAGTTTGGAAGAAAACAAAAACA
CATGTATAGCTTAGCTGATGTAATATTATAAAACTGATACGAACATCCACCTGTAACTTT
GTAAGAGGCATGCTACTTT