Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d014199_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:5:36181347:36183719:1 gene:Zm00001d014199 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/U-box superfamily protein
Sequence

ATGGCTGAAGAGAAGAGCCGTCCGCGGCTGAACGAGCGGATCATGTCGTCCCTCTCAAAG
CGGTCGGTCGCTGCGCATTCCTGGCATGACCTTGAGATAGGACCTGGAGCCCCTGCTGTT
TTCAATTGTGTTGTTGAGATCACAAAGGGCAGTAAAGTGAAATATGAGCTAGACAAGAAG
ACCGGAATGATCAAGGTTGACAGGGTGCTATACTCATCAGTGGTCTACCCACACAACTAC
GGTTTCATTCCACGAACATTGTGTGAAGACGGAGATCCAATGGATGTGCTGGTGTTGATG
CAGGAACCGGTGATACCTGGCTGTTTTCTTCGGGCAAGGGCCATCGGCCTTATGCCCATG
ATTGATCAGGGTGAGAAAGATGATAAGATAATTGCAGTTTGTGTTGACGATCCTGAGTAC
CGCCACTTAACCGATCTCAAGGAGCTTTCTCCGCACCGCCTTAATGAAATCCGTCGCTTC
TTTGAAGACTACAAGAAGAACGAGAACAAGGAGGTTGCTGTGAACGATTTCTTGCCACCA
ACTACTTCCCTGGAGGCCATTCAACACTCAATGGACCTGTACGCTGAATACATCCTGCAC
AGTTTGAGGCGCTAG

Peptide Sequence

PEP ID

Zm00001d014199_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:5:36181347:36183719:1 gene:Zm00001d014199 transcript:Zm00001d014199_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/U-box superfamily protein
Sequence

MAEEKSRPRLNERIMSSLSKRSVAAHSWHDLEIGPGAPAVFNCVVEITKGSKVKYELDKK
TGMIKVDRVLYSSVVYPHNYGFIPRTLCEDGDPMDVLVLMQEPVIPGCFLRARAIGLMPM
IDQGEKDDKIIAVCVDDPEYRHLTDLKELSPHRLNEIRRFFEDYKKNENKEVAVNDFLPP
TTSLEAIQHSMDLYAEYILHSLRR

Transcript Sequence

Transcript ID

Zm00001d014199_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:36181347:36183719:1 gene:Zm00001d014199 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/U-box superfamily protein
Sequence

GTGCTTCCTGCGTCCCCGTCCTGGTGATCACGCCCAGATCAAATCCTATTCAAATTTGGA
GCGCAATATGGCTGAAGAGAAGAGCCGTCCGCGGCTGAACGAGCGGATCATGTCGTCCCT
CTCAAAGCGGTCGGTCGCTGCGCATTCCTGGCATGACCTTGAGATAGGACCTGGAGCCCC
TGCTGTTTTCAATTGTGTTGTTGAGATCACAAAGGGCAGTAAAGTGAAATATGAGCTAGA
CAAGAAGACCGGAATGATCAAGGTTGACAGGGTGCTATACTCATCAGTGGTCTACCCACA
CAACTACGGTTTCATTCCACGAACATTGTGTGAAGACGGAGATCCAATGGATGTGCTGGT
GTTGATGCAGGAACCGGTGATACCTGGCTGTTTTCTTCGGGCAAGGGCCATCGGCCTTAT
GCCCATGATTGATCAGGGTGAGAAAGATGATAAGATAATTGCAGTTTGTGTTGACGATCC
TGAGTACCGCCACTTAACCGATCTCAAGGAGCTTTCTCCGCACCGCCTTAATGAAATCCG
TCGCTTCTTTGAAGACTACAAGAAGAACGAGAACAAGGAGGTTGCTGTGAACGATTTCTT
GCCACCAACTACTTCCCTGGAGGCCATTCAACACTCAATGGACCTGTACGCTGAATACAT
CCTGCACAGTTTGAGGCGCTAGATCTGGTTTCCAGATGGAACAGTCCCTCTCCTGGTCTC
AGGGGGAAAAAAAATAAGCAATAACCGATCAGCCTCCTGGCTTTGTTTCAGGAGCCGTTT
TGCGGTATATATAACTTGATCAAGGGATAATGTGATTCTTCTGCAAGTTACTGCATATAA
TATGCTAACCATGAGATATATATTGTCTACTTCTGTACATTTTTGTGGAATATTTGAGTC
AACGATTGGAGTCTCTTCTTGCTTTCTGTCAACCTCAAGTGTCGTAGAAAGTGTTGTACT
TTGCTACGCCCCCCCAAATTATGATTGCCACAGAAAGTGTAGTGGCTAAAATCGAATCAA
AGGTAGGGTAAAGTTTG