Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d014145_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:34115758:34118808:1 gene:Zm00001d014145 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCTCTTCGTCGTCTTCGAACCCCGCGTCGCCACAGCCGCCGCCTATGCTGCCGCCG
CCGCCGCCGGAGCCGGCGTCCGCACCCACGCCTCAGCCGCTGCTGCCGGAGGCTAGGCCC
AGGCCGAGCCCCACCGTAGCCGATAGCTTCCGCGGCCTGCTCAGGTCCGGACATGCGCTC
GTCCGCGCCGTCTTCGGGGCTAACTCTGCCCACTCTCGCCTTCCCGTGAAACACCAGCAG
CATCACCTTCACCGCCACCAGCCGCAGCACCGCCCCGGTGAAATCATGAAGCGCATACAA
AGAGAAACGCTGTCCGACGTCAGGAAACTCAAGGAGAAACATGACGAGATCGAGCACATC
CTCTCGCTGTACAAAACCGGCAAGGGGTTGGAGCTCCTAGACCTCCCTATCCAGGTGAAA
ATAGCGCTGGATGCGACCGGGGCACTGTTCCTTGTCGGCGACGACGACAACGGCAACGAG
TTCGAACGGGCAAGAGCAGACCTCGACAAGGCGGGCAGAAGGACGGGTCTCCGCTCGAGG
TTCGTCTTCGAGTCGAAGACCAGGGGCAAAGCGGACACCATTGCCGCAGAGCTCTCGACG
CAGCTCGGAGCGTCAGCTGGCCATCATATTGGGAGACCCGTCGAGCTGACCAGGCTGCAG
TACAGCGCCCGTGTCAACAGGTGGCTGTCCCTGACCTTGGTCCCGTTTGGAGCCCGGTGC
ACCAACTTCTTGCATAGCTCAAGCATGATCCAGAATCTACGGGCTCAAGCCTCTCTCGAC
GGCCCACCGTCAACCTTCGAGCACCATGACTGCGGCGCTGGCTTGAGGATCCAAGGATCC
AAGCTCACCGCCTCCTTGGCTGGGCTGATCCTGGGTTCAGGAGGACTAGACAGTGGGGGC
GGCGGAGGAGGAACAACTAACCGCGTGACGACGTTCGGGCAAGTGACCTGCAGACCAGCC
AACGATGTGAAGCTCAGCTTGTCGGGACTTTGGCAGGTCCACTCACCGTCGTCGTCGTCG
TCCCGGCTCAACCATGTTGGAATCCTCGCCATCCCACGGGGCAGCCTGAGACCAGAACAC
CCCGCCGCCGGAGGCGGCACAGAAGGACACACCGAGCTGAGCGTGAAGTTCGACAGTCGG
GCCGGCGGCGCCATGGCGGTGATGGTGGACTGCGAGCTGTACGAGACTCTCAAGACAGAA
GGCTGGGTTCAGATGGACAGGTCCAGGTCCAGCCACGGACCGCTGCGCTGGGGCTTCTCC
CTGTCCGACGTCCCCGACAACGAGCTCGGGTGGGGCGTCAAGGTTAGCGGCGGCACGGCC
GGAGAGACGACGACGACGACGACGAGGGGGAGGGGGAGGAGTCAGCTGCAGCAGCAGCAG
CACCAGCACCTGGAGCTGGAAGGGTTCCTCAACTTCAACCTGGGTAAGGGCGCGAGGCTG
CAGCCGGCGCTCGTGTACGCCACCAGGACGAAGAGCACGGCCACGCCGGCGCTGTTCCTG
CGCTCGTCGTGGGTCATGTGA

Peptide Sequence

PEP ID

Zm00001d014145_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:34115758:34118808:1 gene:Zm00001d014145 transcript:Zm00001d014145_T001 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASSSSSNPASPQPPPMLPPPPPEPASAPTPQPLLPEARPRPSPTVADSFRGLLRSGHAL
VRAVFGANSAHSRLPVKHQQHHLHRHQPQHRPGEIMKRIQRETLSDVRKLKEKHDEIEHI
LSLYKTGKGLELLDLPIQVKIALDATGALFLVGDDDNGNEFERARADLDKAGRRTGLRSR
FVFESKTRGKADTIAAELSTQLGASAGHHIGRPVELTRLQYSARVNRWLSLTLVPFGARC
TNFLHSSSMIQNLRAQASLDGPPSTFEHHDCGAGLRIQGSKLTASLAGLILGSGGLDSGG
GGGGTTNRVTTFGQVTCRPANDVKLSLSGLWQVHSPSSSSSRLNHVGILAIPRGSLRPEH
PAAGGGTEGHTELSVKFDSRAGGAMAVMVDCELYETLKTEGWVQMDRSRSSHGPLRWGFS
LSDVPDNELGWGVKVSGGTAGETTTTTTRGRGRSQLQQQQHQHLELEGFLNFNLGKGARL
QPALVYATRTKSTATPALFLRSSWVM

Transcript Sequence

Transcript ID

Zm00001d014145_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:34115758:34118808:1 gene:Zm00001d014145 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCATTCTTCTCTTCCAGTTCCAACAGCTCTCCACTTGTCACCGAGGCCTCGCGGCGGCGG
CCGCCGGCAACGTACTTTATGGCCTCTTCGTCGTCTTCGAACCCCGCGTCGCCACAGCCG
CCGCCTATGCTGCCGCCGCCGCCGCCGGAGCCGGCGTCCGCACCCACGCCTCAGCCGCTG
CTGCCGGAGGCTAGGCCCAGGCCGAGCCCCACCGTAGCCGATAGCTTCCGCGGCCTGCTC
AGGTCCGGACATGCGCTCGTCCGCGCCGTCTTCGGGGCTAACTCTGCCCACTCTCGCCTT
CCCGTGAAACACCAGCAGCATCACCTTCACCGCCACCAGCCGCAGCACCGCCCCGGTGAA
ATCATGAAGCGCATACAAAGAGAAACGCTGTCCGACGTCAGGAAACTCAAGGAGAAACAT
GACGAGATCGAGCACATCCTCTCGCTGTACAAAACCGGCAAGGGGTTGGAGCTCCTAGAC
CTCCCTATCCAGGTGAAAATAGCGCTGGATGCGACCGGGGCACTGTTCCTTGTCGGCGAC
GACGACAACGGCAACGAGTTCGAACGGGCAAGAGCAGACCTCGACAAGGCGGGCAGAAGG
ACGGGTCTCCGCTCGAGGTTCGTCTTCGAGTCGAAGACCAGGGGCAAAGCGGACACCATT
GCCGCAGAGCTCTCGACGCAGCTCGGAGCGTCAGCTGGCCATCATATTGGGAGACCCGTC
GAGCTGACCAGGCTGCAGTACAGCGCCCGTGTCAACAGGTGGCTGTCCCTGACCTTGGTC
CCGTTTGGAGCCCGGTGCACCAACTTCTTGCATAGCTCAAGCATGATCCAGAATCTACGG
GCTCAAGCCTCTCTCGACGGCCCACCGTCAACCTTCGAGCACCATGACTGCGGCGCTGGC
TTGAGGATCCAAGGATCCAAGCTCACCGCCTCCTTGGCTGGGCTGATCCTGGGTTCAGGA
GGACTAGACAGTGGGGGCGGCGGAGGAGGAACAACTAACCGCGTGACGACGTTCGGGCAA
GTGACCTGCAGACCAGCCAACGATGTGAAGCTCAGCTTGTCGGGACTTTGGCAGGTCCAC
TCACCGTCGTCGTCGTCGTCCCGGCTCAACCATGTTGGAATCCTCGCCATCCCACGGGGC
AGCCTGAGACCAGAACACCCCGCCGCCGGAGGCGGCACAGAAGGACACACCGAGCTGAGC
GTGAAGTTCGACAGTCGGGCCGGCGGCGCCATGGCGGTGATGGTGGACTGCGAGCTGTAC
GAGACTCTCAAGACAGAAGGCTGGGTTCAGATGGACAGGTCCAGGTCCAGCCACGGACCG
CTGCGCTGGGGCTTCTCCCTGTCCGACGTCCCCGACAACGAGCTCGGGTGGGGCGTCAAG
GTTAGCGGCGGCACGGCCGGAGAGACGACGACGACGACGACGAGGGGGAGGGGGAGGAGT
CAGCTGCAGCAGCAGCAGCACCAGCACCTGGAGCTGGAAGGGTTCCTCAACTTCAACCTG
GGTAAGGGCGCGAGGCTGCAGCCGGCGCTCGTGTACGCCACCAGGACGAAGAGCACGGCC
ACGCCGGCGCTGTTCCTGCGCTCGTCGTGGGTCATGTGATTTCGTCGTCCAGCTCGCAGG
CGCATGCCAGCGTTACGGTTGGTCTCTCTGCTGGTTTGTGAGAGATATCTTCTTCTACCT
CGTCCTGCTTGGTTTGCTTGGTCACCTGTTTTGCCGCTGGCATTGCTGCAGCTAATAACA
GTTTTGAATGACATATCCTTACTCGTTGTACATGCCAAAGAGATCGTGATTTTTTTTTAC
AGATTTAACTAATTTTCTGTCGTTTCCTATGTCTCAATATGCGTGGTCAGTGTGAAACTT
ATTTTAGATCATAAAATTAAGAAGGATTAGACACAAATACAACAAGGTGGGCCCAGGTAC
GCTTTTGGATGTTTGAGTGGTACGGTATTGCTTCCGTGACACCACGGCAACCTAGCGCCT
CGCCTCAGCCGTCATGCATGGCTTGCCCGCCGCCCGGCTTGTGCTTGGCGAACGCGACGA
GCCAGAGGAGGACGACGGCGAGCACGACGTTCAGAACCACCTGCCGGTGCCTGCTGAGGC
CCCTCGCGAGCCGCCTCAGCGGGTGACGCCCGCCGTCTCGCCGCGCTGCCAGGCCGCCGC
CGCCGTGGGCGTCGTCGCCGGTCTCGTCCACTCCCCGAACCGCGTCCTCGTACACCTCCT
CCTCCGCCGGCTGCTGCTGCTGCTGCTGGGTGCCCCACCAGGCGGCGGCGGCGCCCGCTG
GGCGCGGCACCTGGATGTAGAGCATGCCCTTGTCGAGCTGGACCGTGATCGCGGCGACGT
CGCAGCCTGCGGGGAGGTCGAACCGCTTGGTGAAGTGGCGCCGCTGCATGCCGCCACCCC
CGTCGACGGCGCCCTGGTCGCCGCTGACCTTGAGGCTCCCCCACGGCTCCACCTGCACCT
TCAGCTGGTCCTTGCTGAACCCTGAGATGTATCGACGACGACGGCGACACACGATGACAC
ATATTGACATGGATGCATGATGCCGTGCCGGCGGGTGCCGTGGTTTTGT