Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d014110_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:32818181:32819837:-1 gene:Zm00001d014110 gene_biotype:protein_coding transcript_biotype:protein_coding description:Orphans transcription factor [Source:UniProtKB/TrEMBL;Acc:B4FJV6]
Sequence

ATGCGGATTCGTAGGAGAACATCTCACGTCCTTGGCTCCGGCTACTCTACACCTGCTACT
CCGCCTCCTATGCTTGTAACTCCACCACCGATTTCGGAACCGTGTTTGGAGCCGCTTACA
TCTCACATTCACGACGACTTCTTGAGCCCTACTACAACCCGAGAGAGTCTCTGCAAGCTC
AGTCGCTCACCATGGGACCTCTTGGATGACTTGTCCCTCTCGGATCCTCAGGAGGTGGAT
GACCTCCTTGATGGTTACTATGTAAACATGGACTCCCATGCATGGAGCCTCTCCTCGGCC
ACCATGCCCGTCACCTCCGTGAAGAATGAGAAGACGACGACCATGGCCGCAGCTAGCAGT
GAGAGAGCACAACTACAGATACTGAATAAGAATACAACATTGAAAAAGGCTACAGTGGGG
GAGAAAAGGGTCAGAGAGATCCAGAACCAAAAGACTGCAAATGTGAAGAAAAAAGAGGGT
AAGGAAGAGGCAGCACGTACCTGGCAGTGCAAGAAGAATGATGGCAAGGGGTGGAACTGC
CGTCACAATGCGAGTCACCCCAACTCCCTCTGTGAGTACCACTTGATGAAGAAGCGTTCC
TACTTGAACTTACAGCATGCTTCGCCAGCGGAGGAAGATAAGGCCATGGCGGCAGCACCA
ACATCAGCAGCCTCCAAGCCCTCCAGCAGCTCCAACACACAGAAGACGAAGCTTCCCAAC
AACTACGATGCAAACGAGGGCTTCTACTACTACCACGGGTTTCGCCCGTCTCGTGGCAAG
AGGCGCTGCAGGAACCATCCAAAGAATGATGAAGAGGTGAAGGTGGAACCATCCAAATCT
GCTTCTCTTCCGAGTCATGCCAAAGTTGAGATTGAAGATGCTAGCACGAGCAATGGGGCT
ACAGCTGGCGGTGATGACGTGTGCAACGACAACAACTCTGGCCGCGGCAACGTCAACAAC
ATGGATCAGAGGAACCAAAATCCATTGAAGCTCCCGAGAAAGCCAGTGAAGGTGCGGTTG
CTCATGTCGCTGTGA

Peptide Sequence

PEP ID

Zm00001d014110_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:32818181:32819837:-1 gene:Zm00001d014110 transcript:Zm00001d014110_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Orphans transcription factor [Source:UniProtKB/TrEMBL;Acc:B4FJV6]
Sequence

MRIRRRTSHVLGSGYSTPATPPPMLVTPPPISEPCLEPLTSHIHDDFLSPTTTRESLCKL
SRSPWDLLDDLSLSDPQEVDDLLDGYYVNMDSHAWSLSSATMPVTSVKNEKTTTMAAASS
ERAQLQILNKNTTLKKATVGEKRVREIQNQKTANVKKKEGKEEAARTWQCKKNDGKGWNC
RHNASHPNSLCEYHLMKKRSYLNLQHASPAEEDKAMAAAPTSAASKPSSSSNTQKTKLPN
NYDANEGFYYYHGFRPSRGKRRCRNHPKNDEEVKVEPSKSASLPSHAKVEIEDASTSNGA
TAGGDDVCNDNNSGRGNVNNMDQRNQNPLKLPRKPVKVRLLMSL

Transcript Sequence

Transcript ID

Zm00001d014110_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:32818181:32819837:-1 gene:Zm00001d014110 gene_biotype:protein_coding transcript_biotype:protein_coding description:Orphans transcription factor [Source:UniProtKB/TrEMBL;Acc:B4FJV6]
Sequence

CACAAACCCTAGAGCCCGAGGACACCAGATCTGTTCTCTTCTTCGCTTGTCCCAACCATG
CGGATTCGTAGGAGAACATCTCACGTCCTTGGCTCCGGCTACTCTACACCTGCTACTCCG
CCTCCTATGCTTGTAACTCCACCACCGATTTCGGAACCGTGTTTGGAGCCGCTTACATCT
CACATTCACGACGACTTCTTGAGCCCTACTACAACCCGAGAGAGTCTCTGCAAGCTCAGT
CGCTCACCATGGGACCTCTTGGATGACTTGTCCCTCTCGGATCCTCAGGAGGTGGATGAC
CTCCTTGATGGTTACTATGTAAACATGGACTCCCATGCATGGAGCCTCTCCTCGGCCACC
ATGCCCGTCACCTCCGTGAAGAATGAGAAGACGACGACCATGGCCGCAGCTAGCAGTGAG
AGAGCACAACTACAGATACTGAATAAGAATACAACATTGAAAAAGGCTACAGTGGGGGAG
AAAAGGGTCAGAGAGATCCAGAACCAAAAGACTGCAAATGTGAAGAAAAAAGAGGGTAAG
GAAGAGGCAGCACGTACCTGGCAGTGCAAGAAGAATGATGGCAAGGGGTGGAACTGCCGT
CACAATGCGAGTCACCCCAACTCCCTCTGTGAGTACCACTTGATGAAGAAGCGTTCCTAC
TTGAACTTACAGCATGCTTCGCCAGCGGAGGAAGATAAGGCCATGGCGGCAGCACCAACA
TCAGCAGCCTCCAAGCCCTCCAGCAGCTCCAACACACAGAAGACGAAGCTTCCCAACAAC
TACGATGCAAACGAGGGCTTCTACTACTACCACGGGTTTCGCCCGTCTCGTGGCAAGAGG
CGCTGCAGGAACCATCCAAAGAATGATGAAGAGGTGAAGGTGGAACCATCCAAATCTGCT
TCTCTTCCGAGTCATGCCAAAGTTGAGATTGAAGATGCTAGCACGAGCAATGGGGCTACA
GCTGGCGGTGATGACGTGTGCAACGACAACAACTCTGGCCGCGGCAACGTCAACAACATG
GATCAGAGGAACCAAAATCCATTGAAGCTCCCGAGAAAGCCAGTGAAGGTGCGGTTGCTC
ATGTCGCTGTGAGCAACCAAAAGCAGCCAGGTGCTTGCGCGTTGCACATCGATGGCAGAA
GATGAAGTTTGGTCTGTCTGTTTTACTTTGAATTGAGACTCTCGTAGCTCATGCATCATC
CCCCTATCGTTGTTGGTTTAAATTGGCTTATAAGCCGTTTGCCTCTTGCATCTTGACTTG
TTGTTTCTGGTAATAATGCTACTGACAGCAGGTATTTTGAGTTC