Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d014094_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:5:32207822:32212251:-1 gene:Zm00001d014094 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA-binding (RRM/RBD/RNP motifs) family protein
Sequence

ATGACGACCCGCATAGCGCCAGGCGTGGGCGCGAACCTACTCGGGCAGCACTCAGCGGAG
CGCAACCAGGACGCCACCACCTACGTCGGCAACCTCGACCCTCAGGTTTCTGAGGAGCTT
CTATGGGAATTGTTTGTCCAAGCAGGCCCTGTTGTGAATGTGTATGTCCCAAAAGACAGA
GTTACAAACTTACACCAGGGATATGGATTTGTAGAATTCAGGAGCGAGGAAGATGCAGAT
TATGCTATTAAGACTTTGAACATGATCAAACTATATGGGAAGCCCATAAGAGTAAACAAG
GCTTCCCAGGATAAGAAGAGCTTGGACGTTGGAGCAAATCTGTTTATTGGCAATCTTGAT
CCGGATGTTGATGAGAAGCTCCTCTATGATACCTTCAGTGCATTTGGAGTGATTGTAACT
AATCCTAAGATAATGCGAGATCCTGAAACAGGAAATTCTAGAGGCTTTGGCTTTGTGAGC
TATGAGTCCTTTGAATCATCTGACCAAGCAATAGAGGCCATGAACAACCAACATTTGTGC
AACCGCCCAATCACTGTCTCTTATGCTTACAAGAAAGACACGAAAGGAGAACGCCATGGC
ACACCAGCAGAGAGACTGCTGGCAGCAAACAATCCAGGATCTCAAAAGAATAGGCCACAC
ACAATGTTTGCAAGTGGTCCGCCGACCCAAGGTCATCCAAATGGTGGTCCGCCTGTGCCA
CGGCCTTATGGCAATGGCACAATTCCTGGACAGATTCAACACATTCGGCAACCACCTCCA
CCACCTGTTGGACAATTCCCCCCTCCAATGCAGATGCACGGGCAACCAACTTGGCCCGCT
CAACATTCTATGCCGCCTCCCATGCCATCGCAACTCCAGTACAGGCTCCCAATGAGGCCA
CCACCACCAAATATGATGCCTCCTCCGGTTGGCATGGTAAGGCCGCCACCTCCTCCCACT
GGTATGTCAGCACCACCTATGTGGATGCCACCCCCACCCCCACCACATCAAGGTGGTGGA
ATGCCTCCGCCTCCCATGTCTATGCCACCACCGCCTCCACCACCATCTAGTTAA

Peptide Sequence

PEP ID

Zm00001d014094_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:5:32207822:32212251:-1 gene:Zm00001d014094 transcript:Zm00001d014094_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA-binding (RRM/RBD/RNP motifs) family protein
Sequence

MTTRIAPGVGANLLGQHSAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
VTNLHQGYGFVEFRSEEDADYAIKTLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
PDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYESFESSDQAIEAMNNQHLC
NRPITVSYAYKKDTKGERHGTPAERLLAANNPGSQKNRPHTMFASGPPTQGHPNGGPPVP
RPYGNGTIPGQIQHIRQPPPPPVGQFPPPMQMHGQPTWPAQHSMPPPMPSQLQYRLPMRP
PPPNMMPPPVGMVRPPPPPTGMSAPPMWMPPPPPPHQGGGMPPPPMSMPPPPPPPSS

Transcript Sequence

Transcript ID

Zm00001d014094_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:32207822:32212251:-1 gene:Zm00001d014094 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA-binding (RRM/RBD/RNP motifs) family protein
Sequence

GCACTGACTCGAGGTGGAACTGGGCCAGCCAGGGACTCTGGCCCGACCCGAGAACCTCAA
CCAAAACCTCACCTTGGCACCGCCGCGTCGCTCGGCGCCTCGTCGGGAACTCTCCGCCGC
CACCCAGTGACCCGCCGCGCCTTGCAGCGGCGACGGAGGGACCAGCCAGCCAGCCATGAC
GACCCGCATAGCGCCAGGCGTGGGCGCGAACCTACTCGGGCAGCACTCAGCGGAGCGCAA
CCAGGACGCCACCACCTACGTCGGCAACCTCGACCCTCAGGTTTCTGAGGAGCTTCTATG
GGAATTGTTTGTCCAAGCAGGCCCTGTTGTGAATGTGTATGTCCCAAAAGACAGAGTTAC
AAACTTACACCAGGGATATGGATTTGTAGAATTCAGGAGCGAGGAAGATGCAGATTATGC
TATTAAGACTTTGAACATGATCAAACTATATGGGAAGCCCATAAGAGTAAACAAGGCTTC
CCAGGATAAGAAGAGCTTGGACGTTGGAGCAAATCTGTTTATTGGCAATCTTGATCCGGA
TGTTGATGAGAAGCTCCTCTATGATACCTTCAGTGCATTTGGAGTGATTGTAACTAATCC
TAAGATAATGCGAGATCCTGAAACAGGAAATTCTAGAGGCTTTGGCTTTGTGAGCTATGA
GTCCTTTGAATCATCTGACCAAGCAATAGAGGCCATGAACAACCAACATTTGTGCAACCG
CCCAATCACTGTCTCTTATGCTTACAAGAAAGACACGAAAGGAGAACGCCATGGCACACC
AGCAGAGAGACTGCTGGCAGCAAACAATCCAGGATCTCAAAAGAATAGGCCACACACAAT
GTTTGCAAGTGGTCCGCCGACCCAAGGTCATCCAAATGGTGGTCCGCCTGTGCCACGGCC
TTATGGCAATGGCACAATTCCTGGACAGATTCAACACATTCGGCAACCACCTCCACCACC
TGTTGGACAATTCCCCCCTCCAATGCAGATGCACGGGCAACCAACTTGGCCCGCTCAACA
TTCTATGCCGCCTCCCATGCCATCGCAACTCCAGTACAGGCTCCCAATGAGGCCACCACC
ACCAAATATGATGCCTCCTCCGGTTGGCATGGTAAGGCCGCCACCTCCTCCCACTGGTAT
GTCAGCACCACCTATGTGGATGCCACCCCCACCCCCACCACATCAAGGTGGTGGAATGCC
TCCGCCTCCCATGTCTATGCCACCACCGCCTCCACCACCATCTAGTTAAACACATGCAAA
GGACAGTACCGTCTGGTCAATGTGTAAGCTGTAACTGTAGACTAAGGATGCTGGTTCCTT
TCATGTCTCCATGTAACTTCGTCAACACTAGGTTAAGAGGAGGTTTGAGAGTTAACCTGA
CAGATACACTCAAGATTAACAGCTATTTATTCATGTTGTGTTGAAGATAAAATGAATTTT
GTGCTTGTCTACCCACTACTTGTGTTCTCTGATTGCCGTGATACGTTTACAACGATCACT
ATGCACGTTCTGTTGCCACTGAATTATCGATGGTGGAAGTTTCAAACAAAGCTATTTGGG
CCATGATTTTAGC