Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d014085_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:31922981:31928214:1 gene:Zm00001d014085 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide binding protein

Sequence

ATGGCTGACGGGGCCGAGATGGACGAAGAGGCTATGCGGGCCTTCTTCCCGCTCTCCTTC
GGAAAGGCGGCTCCGCGGCCCAGCTCTGCTACCTCCTCCGCCCACTCCAACACCCTTCGC
AAGCCTCAAAACCCTAGTAACCCCAAGCCTTCCGCCTCTACCGCCGCGGACGACGATGGG
GCCGCTATGATTGGTCCTCCTCGCCCGCCGCCGGCGCCCGCGGGGGAGGAAGACGATGAG
GACGGCGGCGGTATCATGATCGGGCCGCCTCGGCCACCGCCGCCCTCCGCTCGCGGCGAG
GGGGACGACGGCGACGGCATGATTGGGCCGCCTAGGCCGCCGCCAGCGGATGATGAAGAC
GTCGATGATGATGAGGACGACGACGAGGAGGAGATGGAGGATGATGGGGAGGGTGGATTC
AATCGGATCCCTCTTAGCAACGAAATTGTTCTGCGGGGGCACAATAAGGTTGTCTCTGCC
CTTGCTGTTGACCATACAGGATCCAGAGTGCTCTCTGGTAGCTATGATTATACAGTGCGT
ATGTACGACTTCCAGGGTATGAATTCAAAGCTTCAGTCATTCAGACAATTGGAACCATTT
GAGGGCCATCAAGTTCGTAGCCTAAGTTGGAGTCCAACGTCTGATCGATTCTTATGTGTT
ACTGGTTCAGCTCAGGCCAAGATTTACGACAGGGATGGACTTACACTAGGCGAGTTTGTT
AAGGGTGATATGTATATTCGTGATCTGAAGAATACAAAAGGTCACATCTCTGGGCTTACA
GGTGGTGAGTGGAATCCAAAGTCAAAAGAAACCATTTTGACATCATCTGAAGATGGCTCC
ATGCGTCTCTGGGATGTGTCTGATTTTACAAGTCAGAAGCAGGTCATCAAACCTAAGCTG
GTACGACCAATGCGGATTCCTGTTACATCATGTGCATGGGACCATGAAGGGAAACGAATT
GTGGGTGGCATAGGGGATGGTTCTATACAGGTCTGGACCATAAAAGCTGGATGGGGTAGC
AGACCAGATATCCACGTTGAGAAAACACACACAGAGGATATTACTGGGGTTAAGTTCTCA
ACAGATGGACAGAGCCTTCTGTCAAGAAGTATGGATAGTACTCTTAAGATATGGGATTTG
AGAAGAATGAAAACTCCTTTGAAAGTATTTGAAGATCTGCCAAATCACTACGCTGAGACA
AATGCAGCATTTAGCTCAGATGAGCAGCTTATTTTTACAGGAACATCTATTGAAAAAGAT
GGTGACAATGGGGGATTACTTTGTTTCTTTGATAGAAAGAAACTTGAGCTTGTATCAAGG
GTGGGAATTTCAGCACATTACAGTGTGATAAGGTGCCTCTGGCATCCAAGAATCAACCAG
GTGTTTGCAACAGTTGGAGACAAGAAAGAAGGTGGGACTCATATCCTGTACGATCCTTCT
ATTAGTCAAAGGGGAGCTCTTGTATGTGTTGGACGAGCACCAAGGAAAAAGTCTGTTGAT
GATTTTGAGGTGCAACCTGTCATACACAATCCACATGCATTGCCACTTTTCAGAGATCAA
CCAAGTCGTAAGCGTCAAAGAGAGAAGATACTGAAAGACCCACTCAAATCCCACAAACCA
GAAGCACCTGTTAATGGTCCAGGTTTTGGTGGAAGAGTTGGTACTACAAAAGGCAGTTTG
CTGACACAGTATCTCTTGAAGGAAGGTGGTTTAATTAAGGAGACCTGGATGGATGAAGAT
CCAAGAGAAGCCATTTTGAAGTATGCTGATGCTGCGGAGAAAGACCCAAAGTTTATTGCG
CCAGCTTATTCCCAAACCCAGCCGAAACCTGTTTTTGCGGAGTCTGATTCAGACAATGAA
GAGAAATAA

Peptide Sequence

PEP ID

Zm00001d014085_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:31922981:31928214:1 gene:Zm00001d014085 transcript:Zm00001d014085_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide binding protein

Sequence

MADGAEMDEEAMRAFFPLSFGKAAPRPSSATSSAHSNTLRKPQNPSNPKPSASTAADDDG
AAMIGPPRPPPAPAGEEDDEDGGGIMIGPPRPPPPSARGEGDDGDGMIGPPRPPPADDED
VDDDEDDDEEEMEDDGEGGFNRIPLSNEIVLRGHNKVVSALAVDHTGSRVLSGSYDYTVR
MYDFQGMNSKLQSFRQLEPFEGHQVRSLSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFV
KGDMYIRDLKNTKGHISGLTGGEWNPKSKETILTSSEDGSMRLWDVSDFTSQKQVIKPKL
VRPMRIPVTSCAWDHEGKRIVGGIGDGSIQVWTIKAGWGSRPDIHVEKTHTEDITGVKFS
TDGQSLLSRSMDSTLKIWDLRRMKTPLKVFEDLPNHYAETNAAFSSDEQLIFTGTSIEKD
GDNGGLLCFFDRKKLELVSRVGISAHYSVIRCLWHPRINQVFATVGDKKEGGTHILYDPS
ISQRGALVCVGRAPRKKSVDDFEVQPVIHNPHALPLFRDQPSRKRQREKILKDPLKSHKP
EAPVNGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPREAILKYADAAEKDPKFIA
PAYSQTQPKPVFAESDSDNEEK

Transcript Sequence

Transcript ID

Zm00001d014085_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:31922981:31928214:1 gene:Zm00001d014085 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide binding protein

Sequence

CCGACCGGTTTCGGAAGGCACAAACCCGCATCTCTCCTGATTTGGCATAACCTCGCGCAA
CTATCACAGCACAGGCAACCCTGAGGCCCAGACCTGATCTCGCCGGCGGCGAGCTTGTGT
CCATGGCTGACGGGGCCGAGATGGACGAAGAGGCTATGCGGGCCTTCTTCCCGCTCTCCT
TCGGAAAGGCGGCTCCGCGGCCCAGCTCTGCTACCTCCTCCGCCCACTCCAACACCCTTC
GCAAGCCTCAAAACCCTAGTAACCCCAAGCCTTCCGCCTCTACCGCCGCGGACGACGATG
GGGCCGCTATGATTGGTCCTCCTCGCCCGCCGCCGGCGCCCGCGGGGGAGGAAGACGATG
AGGACGGCGGCGGTATCATGATCGGGCCGCCTCGGCCACCGCCGCCCTCCGCTCGCGGCG
AGGGGGACGACGGCGACGGCATGATTGGGCCGCCTAGGCCGCCGCCAGCGGATGATGAAG
ACGTCGATGATGATGAGGACGACGACGAGGAGGAGATGGAGGATGATGGGGAGGGTGGAT
TCAATCGGATCCCTCTTAGCAACGAAATTGTTCTGCGGGGGCACAATAAGGTTGTCTCTG
CCCTTGCTGTTGACCATACAGGATCCAGAGTGCTCTCTGGTAGCTATGATTATACAGTGC
GTATGTACGACTTCCAGGGTATGAATTCAAAGCTTCAGTCATTCAGACAATTGGAACCAT
TTGAGGGCCATCAAGTTCGTAGCCTAAGTTGGAGTCCAACGTCTGATCGATTCTTATGTG
TTACTGGTTCAGCTCAGGCCAAGATTTACGACAGGGATGGACTTACACTAGGCGAGTTTG
TTAAGGGTGATATGTATATTCGTGATCTGAAGAATACAAAAGGTCACATCTCTGGGCTTA
CAGGTGGTGAGTGGAATCCAAAGTCAAAAGAAACCATTTTGACATCATCTGAAGATGGCT
CCATGCGTCTCTGGGATGTGTCTGATTTTACAAGTCAGAAGCAGGTCATCAAACCTAAGC
TGGTACGACCAATGCGGATTCCTGTTACATCATGTGCATGGGACCATGAAGGGAAACGAA
TTGTGGGTGGCATAGGGGATGGTTCTATACAGGTCTGGACCATAAAAGCTGGATGGGGTA
GCAGACCAGATATCCACGTTGAGAAAACACACACAGAGGATATTACTGGGGTTAAGTTCT
CAACAGATGGACAGAGCCTTCTGTCAAGAAGTATGGATAGTACTCTTAAGATATGGGATT
TGAGAAGAATGAAAACTCCTTTGAAAGTATTTGAAGATCTGCCAAATCACTACGCTGAGA
CAAATGCAGCATTTAGCTCAGATGAGCAGCTTATTTTTACAGGAACATCTATTGAAAAAG
ATGGTGACAATGGGGGATTACTTTGTTTCTTTGATAGAAAGAAACTTGAGCTTGTATCAA
GGGTGGGAATTTCAGCACATTACAGTGTGATAAGGTGCCTCTGGCATCCAAGAATCAACC
AGGTGTTTGCAACAGTTGGAGACAAGAAAGAAGGTGGGACTCATATCCTGTACGATCCTT
CTATTAGTCAAAGGGGAGCTCTTGTATGTGTTGGACGAGCACCAAGGAAAAAGTCTGTTG
ATGATTTTGAGGTGCAACCTGTCATACACAATCCACATGCATTGCCACTTTTCAGAGATC
AACCAAGTCGTAAGCGTCAAAGAGAGAAGATACTGAAAGACCCACTCAAATCCCACAAAC
CAGAAGCACCTGTTAATGGTCCAGGTTTTGGTGGAAGAGTTGGTACTACAAAAGGCAGTT
TGCTGACACAGTATCTCTTGAAGGAAGGTGGTTTAATTAAGGAGACCTGGATGGATGAAG
ATCCAAGAGAAGCCATTTTGAAGTATGCTGATGCTGCGGAGAAAGACCCAAAGTTTATTG
CGCCAGCTTATTCCCAAACCCAGCCGAAACCTGTTTTTGCGGAGTCTGATTCAGACAATG
AAGAGAAATAACCATGCGCCTGGTTACCTAAGCTAGCATGCACCTGCATTCTGTTTTCTG
ACAGATGTCTCTTGATGAGCTTGTTGCACATGCCCTGTAACCTGCTTTTCAACAGTGGAG
AAACAAAAGAGCATCTTCAAGGGTCTTGATGATAGGAGCTCTGCCCCTTCATTACAGATG
GATATGATTAGTATCTACGACACTTCAGCACTAGAGCTCTATGATTTGTTGGATGTTGTA
CCCACTGTATGTACTTAGTCCTGAAACAGTGGCCAATCTATATTATACTCTGTTCTTTCT
TTTTTATTTGTCGCGGTCTAGTTTAAAAATGAACTAGCGGGCGACAAATATTCAAGAACG
GAGGTAGTATATGAGGTAGTATATGACTTAGACGTAACTTTAGTGCACCGAATGTAGTCA
ACCTTTGTTTGCTTTGGAGAATGAGGATTTGTTGTTCTAGTATCAGTCTCTTTGATGTTC
CTAATGGGCTAGTTGGAAGATATTTTGAGGATTTTGAAAGGCAAATGCTGTTTTTGTGTG
GTTTGGGCTGTACGGTCCAAACAAGTTGTGAAACAGTGGCGTATCAGCCTTGTTATTACT
ATGATCCAACAAGCCAATGGTCCTGGATATAGCAAGATTTGGATAACACAATCCTGAAAT
ATCATTGCTATCTATTTTCTTTAATAA