Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d014030_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:29404683:29410087:-1 gene:Zm00001d014030 gene_biotype:protein_coding transcript_biotype:protein_coding description:Malate dehydrogenase cytoplasmic 1
Sequence

ATGGCGAAGGAACCGATGCGCGTGCTCGTCACTGGCGCCGCAGGGCAAATTGGATATGCT
CTTGTTCCCATGATTGCTAGGGGAGTTATGCTTGGTGCAGACCAGCCTGTTATTCTGCAC
ATGCTTGATATTCCGCCAGCAGCTGAAGCCCTTAATGGTGTTAAGATGGAGTTGGTTGAT
GCTGCATTTCCTCTTCTGAAGGGAGTCGTTGCGACAACTGATGTTGTGGAAGCGTGCACT
GGCGTGAATGTGGCCGTCATGGTTGGTGGATTCCCCAGGAAGGAGGGAATGGAAAGGAAA
GATGTTATGTCTAAAAATGTTTCAATCTACAAAACCCAAGCATCTGCTCTTGAAGCCCAT
GCGGCCCCCAACTGCAAGGTTCTGGTGGTTGCCAACCCAGCGAACACCAATGCTCTTATC
TTGAAAGAATTTGCTCCATCAATTCCTGATAGGAACGTTACTTGCCTGACCCGGCTGGAC
CACAACAGGGCTCTTGGCCAGATTTCTGAGAGACTTAGTGTCCAAGTCAGTGATGTGAAG
AATGTTATCATCTGGGGTAACCACTCGTCCACTCAGTACCCTGATGTTAACCATGCCACA
GTGAAGACTTCCACTGGGGAGAAGCCTGTTCGTGAGCTTGTTGCTGATGATGAGTGGCTC
AATGGCGAATTCATCACAACTGTCCAACAGCGTGGTGCTGCAATCATCAAAGCGAGAAAG
TTCTCCAGCGCTCTCTCAGCTGCTAGCTCTGCTTGTGACCATATTCGTGATTGGGTTCTT
GGAACCCCTGAGGGGACATTTGTTTCCATGGGTGTGTATTCCGATGGTTCATATGGTGTT
CCTTCCGGACTTATTTACTCATTCCCAGTAACATGCAGTGGTGGTGAATGGAAAATCGTT
CAAGGTATGATCGTTGTAGTGTTGAAAGTAAAGACTTGA

Peptide Sequence

PEP ID

Zm00001d014030_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:29404683:29410087:-1 gene:Zm00001d014030 transcript:Zm00001d014030_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Malate dehydrogenase cytoplasmic 1
Sequence

MAKEPMRVLVTGAAGQIGYALVPMIARGVMLGADQPVILHMLDIPPAAEALNGVKMELVD
AAFPLLKGVVATTDVVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKTQASALEAH
AAPNCKVLVVANPANTNALILKEFAPSIPDRNVTCLTRLDHNRALGQISERLSVQVSDVK
NVIIWGNHSSTQYPDVNHATVKTSTGEKPVRELVADDEWLNGEFITTVQQRGAAIIKARK
FSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYGVPSGLIYSFPVTCSGGEWKIV
QGMIVVVLKVKT

Transcript Sequence

Transcript ID

Zm00001d014030_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:29404683:29410087:-1 gene:Zm00001d014030 gene_biotype:protein_coding transcript_biotype:protein_coding description:Malate dehydrogenase cytoplasmic 1
Sequence

GCTTCCTCCAAAGCCACTCCAAACCCCCGCTTCCAGAACCTTCTCGAAACTCTCCGCCTC
CTCCTCTACTCGCTCCGATGGCGAAGGAACCGATGCGCGTGCTCGTCACTGGCGCCGCAG
GGCAAATTGGATATGCTCTTGTTCCCATGATTGCTAGGGGAGTTATGCTTGGTGCAGACC
AGCCTGTTATTCTGCACATGCTTGATATTCCGCCAGCAGCTGAAGCCCTTAATGGTGTTA
AGATGGAGTTGGTTGATGCTGCATTTCCTCTTCTGAAGGGAGTCGTTGCGACAACTGATG
TTGTGGAAGCGTGCACTGGCGTGAATGTGGCCGTCATGGTTGGTGGATTCCCCAGGAAGG
AGGGAATGGAAAGGAAAGATGTTATGTCTAAAAATGTTTCAATCTACAAAACCCAAGCAT
CTGCTCTTGAAGCCCATGCGGCCCCCAACTGCAAGGTTCTGGTGGTTGCCAACCCAGCGA
ACACCAATGCTCTTATCTTGAAAGAATTTGCTCCATCAATTCCTGATAGGAACGTTACTT
GCCTGACCCGGCTGGACCACAACAGGGCTCTTGGCCAGATTTCTGAGAGACTTAGTGTCC
AAGTCAGTGATGTGAAGAATGTTATCATCTGGGGTAACCACTCGTCCACTCAGTACCCTG
ATGTTAACCATGCCACAGTGAAGACTTCCACTGGGGAGAAGCCTGTTCGTGAGCTTGTTG
CTGATGATGAGTGGCTCAATGGCGAATTCATCACAACTGTCCAACAGCGTGGTGCTGCAA
TCATCAAAGCGAGAAAGTTCTCCAGCGCTCTCTCAGCTGCTAGCTCTGCTTGTGACCATA
TTCGTGATTGGGTTCTTGGAACCCCTGAGGGGACATTTGTTTCCATGGGTGTGTATTCCG
ATGGTTCATATGGTGTTCCTTCCGGACTTATTTACTCATTCCCAGTAACATGCAGTGGTG
GTGAATGGAAAATCGTTCAAGGTATGATCGTTGTAGTGTTGAAAGTAAAGACTTGACACA
GCTATTTGGTGCCTTTGTTCGTTGTAGTTTTTGTCATAGATAGCTAGATGTTGCAGTTTC
TTCGGTAGCTCTTGGTGTCTGAAATTCTGCATGTGCAGTTATAATTGGCCTAAATGATTT
CAATAAGATCTTGCCACCCTACTCAGTAGGAAGTTATTATGTCCTTTTTCTAATCAAATA
TAGCTAATATAAAGG