Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d014003_T008
CDS Infomation

cds chromosome:B73_RefGen_v4:5:28273915:28278373:1 gene:Zm00001d014003 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/U-box superfamily protein
Sequence

ATGTCGAGCGGCGCGGACGGATCGGATCCCTGCACGGGCCTTGACCCGGGGACGATCCCA
GAGCTGCCGGCCCATGAACCTCCTGTGCTGCAGGCTCCGTCGCCGGCGCCGCAGCAGGAG
GTGGTGGTGGCATCGCAGACCGAGGCGCCGTTGCCAGCTGTCACCATCGTGATCTCGCGG
CCAGGCGAGGATGTTCAGATGCCCGATGCAAAGGGTGGCTCCCCGGCATGCTCCCCGCAG
GCCGGTGACGGCAAGCCTATGGCCACCTCGGTTTCGTTGACCGCTTCGGCGGCCGCGAAG
GAAGCCGGGCTGGCAAGGTCCGACTCCGACAGCTTGGACGACTACGAGCAATGCAGGAGC
AACACTTGTACTCTTAATAAGCCCAGGTTCCAGTTAAGAGTTTGTCAACAGAAGACAGAA
GAACCTCTGGTCGACCTTGGATGCAGATGTCGTGGTGATCTTGCAAAAGCACATCGCACA
TGCATTGATTTTTGGTTTCGTACTAGAGGTTCAAACAAGTGTGAGATATGCCAGTTGCTG
TCAATATCGCCCCTCCAGAAACGCAATCAAGTGTATGTTTACTATTTTGCACTTTATATA
TTTCGATCTATATTGGATCATTTGGAGAATGGATGGTTTAGCCCACTTTGGGTTGCATTT
GCAATTCTGATTGGTGGTCTCTTATTGGATGTGCTGATATCTGTTTCTCTCGGTGTTTCC
GCACTTCCTGTCAATATAATAATTGGTGTTCTTATAGTTCTCGGATTGGGCACCGCCCTT
CATCTAGCTCTTGAGTGCTGTCACGAATGGGGCTCAAGGAGGAACGTGGCCAATATTCCG
AGGCTGGAGAACATAGCGCCGACTGGGTACCACCCTGCAGTAGTATAA

Peptide Sequence

PEP ID

Zm00001d014003_P008
PEP Infomation

pep chromosome:B73_RefGen_v4:5:28273915:28278373:1 gene:Zm00001d014003 transcript:Zm00001d014003_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/U-box superfamily protein
Sequence

MSSGADGSDPCTGLDPGTIPELPAHEPPVLQAPSPAPQQEVVVASQTEAPLPAVTIVISR
PGEDVQMPDAKGGSPACSPQAGDGKPMATSVSLTASAAAKEAGLARSDSDSLDDYEQCRS
NTCTLNKPRFQLRVCQQKTEEPLVDLGCRCRGDLAKAHRTCIDFWFRTRGSNKCEICQLL
SISPLQKRNQVYVYYFALYIFRSILDHLENGWFSPLWVAFAILIGGLLLDVLISVSLGVS
ALPVNIIIGVLIVLGLGTALHLALECCHEWGSRRNVANIPRLENIAPTGYHPAVV

Transcript Sequence

Transcript ID

Zm00001d014003_T008
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:28273915:28278373:1 gene:Zm00001d014003 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/U-box superfamily protein
Sequence

AGCAGAAGTAGGTGCTCCGTAACCCGCCCCCCAACACCAAAGTGGCACTCATCACGCCCA
CGCGAGGTGGTCGACGAAGAGCCGCAGAGGAGGGGGAGGTGCTGGGTGGGATCCGGCGGA
CCGCTCATGTCGAGCGGCGCGGACGGATCGGATCCCTGCACGGGCCTTGACCCGGGGACG
ATCCCAGAGCTGCCGGCCCATGAACCTCCTGTGCTGCAGGCTCCGTCGCCGGCGCCGCAG
CAGGAGGTGGTGGTGGCATCGCAGACCGAGGCGCCGTTGCCAGCTGTCACCATCGTGATC
TCGCGGCCAGGCGAGGATGTTCAGATGCCCGATGCAAAGGGTGGCTCCCCGGCATGCTCC
CCGCAGGCCGGTGACGGCAAGCCTATGGCCACCTCGGTTTCGTTGACCGCTTCGGCGGCC
GCGAAGGAAGCCGGGCTGGCAAGGTCCGACTCCGACAGCTTGGACGACTACGAGCAATGC
AGGAGCAACACTTGTACTCTTAATAAGCCCAGGTTCCAGTTAAGAGTTTGTCAACAGAAG
ACAGAAGAACCTCTGGTCGACCTTGGATGCAGATGTCGTGGTGATCTTGCAAAAGCACAT
CGCACATGCATTGATTTTTGGTTTCGTACTAGAGGTTCAAACAAGTGTGAGATATGCCAG
TTGCTGTCAATATCGCCCCTCCAGAAACGCAATCAAGTGTATGTTTACTATTTTGCACTT
TATATATTTCGATCTATATTGGATCATTTGGAGAATGGATGGTTTAGCCCACTTTGGGTT
GCATTTGCAATTCTGATTGGTGGTCTCTTATTGGATGTGCTGATATCTGTTTCTCTCGGT
GTTTCCGCACTTCCTGTCAATATAATAATTGGTGTTCTTATAGTTCTCGGATTGGGCACC
GCCCTTCATCTAGCTCTTGAGTGCTGTCACGAATGGGGCTCAAGGAGGAACGTGGCCAAT
ATTCCGAGGCTGGAGAACATAGCGCCGACTGGGTACCACCCTGCAGTAGTATAATCATTA
TGGGACTTGTAAATAGCGTAGGAACATCTAAGCTCGTGCTGGCTTTTGGATTATTATGTT
CTCGCAACTAGCTTTAGCTCACACGTGTTGCTCGTTAATGTCGAGCTCAAATTCAAAGCT
CGTTGATTACAATCCAGTTCATACTCCCACTAGTCCAATCCAATGTAAATGCAGAGTTAC
TGATACTCGGTCATCACGGGCTAGTGCTCATGCCAAACTGCCAGCACCTTAATTGGATGG
TCTGGCTACCCATTCAGCATGACAGGGCTAGGTTCCTTCTTCCCTCCTTGTACGGTTTAC
TCTGACAAGTCACTTGTTGTGTTTCATCTTTATCTGTGGCTTGTCGGTATAGGCATTTGT
GAAGGCCATTTGAGAGTTGTGGATATAACATTTTTATATGAATTAATCTGCTGATACGTT
TCGTGATTACGTAAAACCATAAA