Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d013996_T006
CDS Infomation	cds chromosome:B73_RefGen_v4:5:27842327:27847963:-1 gene:Zm00001d013996 gene_biotype:protein_coding transcript_biotype:protein_coding description:Syntaxin-41
Sequence	ATGGCGACGCGGAACCGCACGCCGCTCTACCGCAAGTACCGCGACGCGCTGCGGCACGTC CGCGCACCGGCCGGGGCGACGTCGTCGTCCTGCGGGGGCGGGGGAGGGTCGGTGATCGAG ATGGCCTCGCTGCTGCGCTCCGACCGGCCCTACGCGCCCCTCAGCATCGAAGACCCCTCC GCCTCCAGTAGAGGTGCTGTGTCAGTCGGGCTACCCCCAGCCTGGGTGGATGTTTCTGAA GAGATATCTGCAAACATGCAGAGGGCAAGGACAAAAATGACGGAGTTGGCTAAGGCACAT GCCAAAGCCTTGATGCCGTCCTTTGGCGATGGCAGAGACGACCAGCGAGCAATTGAGGTT CTCACACATGAGATAACAGACTTGCTGAAAAGGTCCGAGAAGAGGCTGCAGAAGCTGTCC ATGAAAGATTTGTCAGAGGATTCAAATGTCCGAAAGAATGTCCAGCGTTCCCTTGCTACA GACCTGCAAAACCTGTCAATGGAGTTCCGGAAAAAGCAGTCATCATATTTAAAGCAGCTT CGCCAACAAAAAGAGGGTCAGGATGGTGTTGATTTGGAAATGAATATGAACGGGACAAAG TCTACATTTGAAGACGATGAGTTTGATGATGTGGGTTTCACTGAGATTCAGATGTCAAAA CTTAAGAAAAGCGAAGCATTCACTAGAGAAAGGGAGAGAGAAATTGAGCAGGTTGTTGAA TCAGTCAACGAACTTGCACAGATTATGAAGGATCTTTCAGTTCTTGTGATTGATCAGGGA ACCATCATCGATCGGATAGACTACAACATACAGAACGTTGCAGCTTCAGTTGAGGAAGGT TACAAACAATTGCAAAAGGCTGAGAGGACCCAGAAGAAAGGGGGCATGGTGATGTGTGCC ACTGTCCTTGTCATTCTGATCTTCATCATGATAGTCCTTCTGATTTTGAAGACCATTTTC TGA

Peptide Sequence

PEP ID	Zm00001d013996_P006
PEP Infomation	pep chromosome:B73_RefGen_v4:5:27842327:27847963:-1 gene:Zm00001d013996 transcript:Zm00001d013996_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Syntaxin-41
Sequence	MATRNRTPLYRKYRDALRHVRAPAGATSSSCGGGGGSVIEMASLLRSDRPYAPLSIEDPS ASSRGAVSVGLPPAWVDVSEEISANMQRARTKMTELAKAHAKALMPSFGDGRDDQRAIEV LTHEITDLLKRSEKRLQKLSMKDLSEDSNVRKNVQRSLATDLQNLSMEFRKKQSSYLKQL RQQKEGQDGVDLEMNMNGTKSTFEDDEFDDVGFTEIQMSKLKKSEAFTREREREIEQVVE SVNELAQIMKDLSVLVIDQGTIIDRIDYNIQNVAASVEEGYKQLQKAERTQKKGGMVMCA TVLVILIFIMIVLLILKTIF

Transcript Sequence

Transcript ID	Zm00001d013996_T006
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:27842327:27847963:-1 gene:Zm00001d013996 gene_biotype:protein_coding transcript_biotype:protein_coding description:Syntaxin-41
Sequence	GCACCAAATTCTCCGGTCCCCGCCTCAGCGCCTCCGCCATCGACATCCCACCCGCCCGTC CCCTCGCGGCTCGCGCCCGACGGCCCGAGGCATGGCGACGCGGAACCGCACGCCGCTCTA CCGCAAGTACCGCGACGCGCTGCGGCACGTCCGCGCACCGGCCGGGGCGACGTCGTCGTC CTGCGGGGGCGGGGGAGGGTCGGTGATCGAGATGGCCTCGCTGCTGCGCTCCGACCGGCC CTACGCGCCCCTCAGCATCGAAGACCCCTCCGCCTCCAGTAGAGGTGCTGTGTCAGTCGG GCTACCCCCAGCCTGGGTGGATGTTTCTGAAGAGATATCTGCAAACATGCAGAGGGCAAG GACAAAAATGACGGAGTTGGCTAAGGCACATGCCAAAGCCTTGATGCCGTCCTTTGGCGA TGGCAGAGACGACCAGCGAGCAATTGAGGTTCTCACACATGAGATAACAGACTTGCTGAA AAGGTCCGAGAAGAGGCTGCAGAAGCTGTCCATGAAAGATTTGTCAGAGGATTCAAATGT CCGAAAGAATGTCCAGCGTTCCCTTGCTACAGACCTGCAAAACCTGTCAATGGAGTTCCG GAAAAAGCAGTCATCATATTTAAAGCAGCTTCGCCAACAAAAAGAGGGTCAGGATGGTGT TGATTTGGAAATGAATATGAACGGGACAAAGTCTACATTTGAAGACGATGAGTTTGATGA TGTGGGTTTCACTGAGATTCAGATGTCAAAACTTAAGAAAAGCGAAGCATTCACTAGAGA AAGGGAGAGAGAAATTGAGCAGGTTGTTGAATCAGTCAACGAACTTGCACAGATTATGAA GGATCTTTCAGTTCTTGTGATTGATCAGGGAACCATCATCGATCGGATAGACTACAACAT ACAGAACGTTGCAGCTTCAGTTGAGGAAGGTTACAAACAATTGCAAAAGGCTGAGAGGAC CCAGAAGAAAGGGGGCATGGTGATGTGTGCCACTGTCCTTGTCATTCTGATCTTCATCAT GATAGTCCTTCTGATTTTGAAGACCATTTTCTGACATACTTAGCTATCTCATTTTAATGG GAACGCCACAAATTCATTTGAATAGCGGCGATACGACTCACTGATCTGAAGATGG