Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d013991_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:27692922:27694559:-1 gene:Zm00001d013991 gene_biotype:protein_coding transcript_biotype:protein_coding description:Type III polyketide synthase A
Sequence	ATGTGTTTGCCATGGCCTGGCCGCACCAAGAAAACCACAACAGTACAGCACTGGAAACAG AAAGGTGGACCAAGGAGCGCCCGTGCGGTGACAATGACGGACACTGGCAGCACGGACGCC AACGGCAAGAGCCAGGGCTCAAGGGGCAAGGCGATGCTGCTCGCCTTGGGCAAGGGCTTC CCTGACCAAGTCCTGCCCCAGGAGAAGGTTGCGGCGAGCTACCTCCAAGAAAGCAGCTGC GACGATCCCGACACCAGGGCCAAGCTCGAGCGCCTTTGCACGACCACCACAGTGAGGACA AGGTACACTGTTATGTCCAAGGAGCTTCTGGATAAGCACCCAGAGCTGAAGATGGAGGGT ACTCCAACATTGACACCCCGCCTTGACATCTGCAATGCCGCGGTGATCGACCTTGGTGCT GCTGCAGCTCGTGCTGCCCTCCACGAATGGGGCCGCCCTGCAGCTGATATCACCCACCTC ATCTACATCTCATCCAGTGAACTTCGTCTCCCGGGGGGTGACCTTCACCTGGCTGCTCGC CTTGGCCTTAGTCCAAACACCGTGCGCACTTCCCTTCTCTTCCTTGGCTGCTCCGGTGGT GCTGCTGCCCTCCGCACTGCCAAGGACATCGCTGAGAACAACCCAGGGAGCCGTGTCCTA GTAACGGCTGCTGAGACCACTGTGCTAGGCTTCCGGCCACCCAGTTATGACCGTCCTTAT GACCTTGTTGGTGCTGCCCTGTTTGGTGATGGAGCCTCAGCTGTGATTATAGGAGCAGGC CCCATGGCACCAGCTGAAAATCCTTTCTTGGAGCTTCAGTTCTCCACACAGGAGTTCCTA CCTGGCACTGATAAAGTGATCGATGGCAACATCTCAGAGGAAGGAATTAATTTTAAACTG GGGCGTGATTTGCCTGAGAAGATTGAAAGCCGCATAGAAGGGTTCTGCAGGACTCTCATG AACCAGGTAGGGATAAAGGATTTCAACGATGTGTTTTGGGCTGTGCATCCTGGCGGACCA GCAATACTAAACAGGCTTGAGATCTGCCTTCAACTTCAGCCAGAGAAGCTCAAGATTAGC AGGAAGGCTTTGATGAACTACGGAAATGTGAGCAGCAATACAATCTTCTATGTGCTGGAG TACTTGAGGGACGAGTTAAAGAAAGGGACAATAAGTGAAGACTGGGGATTGATCTTGGCT TTTGGCCCAGGCATCACCTTCGAAGGACTTCTAGTCCAAGGTGTTAAGAAAACATTCACA AGCTAA

Peptide Sequence

PEP ID	Zm00001d013991_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:27692922:27694559:-1 gene:Zm00001d013991 transcript:Zm00001d013991_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Type III polyketide synthase A
Sequence	MCLPWPGRTKKTTTVQHWKQKGGPRSARAVTMTDTGSTDANGKSQGSRGKAMLLALGKGF PDQVLPQEKVAASYLQESSCDDPDTRAKLERLCTTTTVRTRYTVMSKELLDKHPELKMEG TPTLTPRLDICNAAVIDLGAAAARAALHEWGRPAADITHLIYISSSELRLPGGDLHLAAR LGLSPNTVRTSLLFLGCSGGAAALRTAKDIAENNPGSRVLVTAAETTVLGFRPPSYDRPY DLVGAALFGDGASAVIIGAGPMAPAENPFLELQFSTQEFLPGTDKVIDGNISEEGINFKL GRDLPEKIESRIEGFCRTLMNQVGIKDFNDVFWAVHPGGPAILNRLEICLQLQPEKLKIS RKALMNYGNVSSNTIFYVLEYLRDELKKGTISEDWGLILAFGPGITFEGLLVQGVKKTFT S

Transcript Sequence

Transcript ID	Zm00001d013991_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:27692922:27694559:-1 gene:Zm00001d013991 gene_biotype:protein_coding transcript_biotype:protein_coding description:Type III polyketide synthase A
Sequence	ACCGAAGATGTGTTTGCCATGGCCTGGCCGCACCAAGAAAACCACAACAGTACAGCACTG GAAACAGAAAGGTGGACCAAGGAGCGCCCGTGCGGTGACAATGACGGACACTGGCAGCAC GGACGCCAACGGCAAGAGCCAGGGCTCAAGGGGCAAGGCGATGCTGCTCGCCTTGGGCAA GGGCTTCCCTGACCAAGTCCTGCCCCAGGAGAAGGTTGCGGCGAGCTACCTCCAAGAAAG CAGCTGCGACGATCCCGACACCAGGGCCAAGCTCGAGCGCCTTTGCACGACCACCACAGT GAGGACAAGGTACACTGTTATGTCCAAGGAGCTTCTGGATAAGCACCCAGAGCTGAAGAT GGAGGGTACTCCAACATTGACACCCCGCCTTGACATCTGCAATGCCGCGGTGATCGACCT TGGTGCTGCTGCAGCTCGTGCTGCCCTCCACGAATGGGGCCGCCCTGCAGCTGATATCAC CCACCTCATCTACATCTCATCCAGTGAACTTCGTCTCCCGGGGGGTGACCTTCACCTGGC TGCTCGCCTTGGCCTTAGTCCAAACACCGTGCGCACTTCCCTTCTCTTCCTTGGCTGCTC CGGTGGTGCTGCTGCCCTCCGCACTGCCAAGGACATCGCTGAGAACAACCCAGGGAGCCG TGTCCTAGTAACGGCTGCTGAGACCACTGTGCTAGGCTTCCGGCCACCCAGTTATGACCG TCCTTATGACCTTGTTGGTGCTGCCCTGTTTGGTGATGGAGCCTCAGCTGTGATTATAGG AGCAGGCCCCATGGCACCAGCTGAAAATCCTTTCTTGGAGCTTCAGTTCTCCACACAGGA GTTCCTACCTGGCACTGATAAAGTGATCGATGGCAACATCTCAGAGGAAGGAATTAATTT TAAACTGGGGCGTGATTTGCCTGAGAAGATTGAAAGCCGCATAGAAGGGTTCTGCAGGAC TCTCATGAACCAGGTAGGGATAAAGGATTTCAACGATGTGTTTTGGGCTGTGCATCCTGG CGGACCAGCAATACTAAACAGGCTTGAGATCTGCCTTCAACTTCAGCCAGAGAAGCTCAA GATTAGCAGGAAGGCTTTGATGAACTACGGAAATGTGAGCAGCAATACAATCTTCTATGT GCTGGAGTACTTGAGGGACGAGTTAAAGAAAGGGACAATAAGTGAAGACTGGGGATTGAT CTTGGCTTTTGGCCCAGGCATCACCTTCGAAGGACTTCTAGTCCAAGGTGTTAAGAAAAC ATTCACAAGCTAATATAACAGAGGGAAGGTTTGCATAGCAAGCATAAAGATTAATCATAT ATACAGAAACATAGGATAAAGAGCATAGATGCATTGGTGAAAGCTGTGCACCGCGTAGTA CATCGCTAACATTTTACTGTATTTATGTGTTTATCTATCAAACAATGTAAGTAGTTGAGT TTGCCTCCAAGAAAAACATTGCAGAAATAAGGCATTATACAGCCTGTTGTTCCACTGTAC TATGCACTAATTGCAGGATTTACTTCAATACAGATT