Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d013985_T007
CDS Infomation	cds chromosome:B73_RefGen_v4:5:27475179:27485252:1 gene:Zm00001d013985 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence	ATGACCAGAGAACCAGATGGGCCACTAGAGCTTGTTATAGAGAATGAAGAACAAACCTTT GGAGTTGGGGGTCAGCTTACTGGTTCTCCTTGGAAAGTTGGTTTTGCCTTGGCAAACGAA AGTGTCTCTGAACAAATTGGAAACACAAATGATGGATATAGAAAGTGTACAATGCAAAAG TTCCATCAATTTGAAAGTTTCTATGGAAAGCTTACTGCTATAGCAAGAGAATATTTGCTT CCCCCTGAAATAGCTAAATTTGGCCTTATAACCGAAAGATCATTGTTGCCTTCACTGGAT GTTGTTAATGAAGGCAACCAGGATACATGGTTTGTCATCACTCATCATATGGGATGCAAA ACTTGTTCAGTTATTGCGAAAGATGGCGATGATCTGAGAAGTATAGTGCAATCCCACCAT AATCTTGGCATTAAGGAGGTTAGTGCTGATGAAAGTAGTAGAGAGGCTATCTTCCCCAGA AACAGGCCCTCTGTAGTTCTATTTATTGATAGATTATCCCACTCCTCAAAAGTCAGAGAT GAAAGCAAATTAGTCCTAAAGTTACTAAGGCAGTATGTGCAAAATAATTACCCATTTCAT GTCAGTAATGGGGTTCCAAGTAGCAGTACTTCCAAAGCACGCTCAAAAGCTGTCCCTTCT TTGAGGAATACAGGTATCTCAGATGCCTATTCTCAAACAGCAAGGTTGAGTGCTTGGGCT TCTAAGCTTATGGCACTTGGGGACAAAATGTCAGTTATGGTGGTTAATGATGGAGATAGT ATTTCTTACAAAAGTTCTAGCCAAGGTAGTGGTGCTAATCCTGTATATGATGTTCTCACT AAGTTGCTAGACAAAGCAAGACCAGGGCATAAGTCAAAGAAAACAAGAATAAGTTTAGTT TCACGAGATGTTGGCCTAAAGATGTTGTCAGATCATTCTGAAATCAAAGTGGTTAAGTCT CTATCAGTTGAAGAGAGTGAATACAAAAGAACTGATGATGCATCTGCCACTACAGCTAAT TCCAATGATGATATTACTGAAGCTTTTGTGGATGAAAACACAGCAAAAGAGACTGAATAT ATCAATGATGGACAAGTACCAAGTATACTTGAGAAATCTTCGGCAACTTACCCTGATGAA CATGATACTGCTCGTGAATTTAATGATACAGAAATTGAGGACAAAAGCATAAGTGAAGCT TCAGATATGAGTGTTGATCTTAAGGAAGATGCCCCCAATAATGCAGATAGTAGTAGTGAG GTTGGAGGTATGCTGCATAAACACATAATGGAGAAAACAGTTACAGAAGCTTTTCAAATT TTGGAACATGATGAAAGAAACTTGTACACTGACCAAGAGGAATCAGTATCATCAAACGAG CAAGTTGATGGATCTTCATTCCTGAGTAAAAAAATCAGTAAAACCGAAGATGCAATTTAT GAAAACACATTCGGTCTATCTGAAGGATTAGAAGAAAGTGATAGAAGATGTCCCCATCAT GCAACATGTAGCTCTTCCTGTGTTCCTGTAAGAGATGACACAGACTTTACTGATCAAGTA ACTTCAAGTATATCTGATTACCGTTTTGCTGGTGCTTTCTACTTCTCTGATGGTGGTTAC AGACTCCTGAGAACTTTAACTGGTGGATCAAGAATTCCGTCCCTGGTAATAATTGATCCA GTTGAACAAAAACATTATATATTTCCTGAGGAAAGCGAGTATAGCTATGCTTCTTTACAA AATTATCTTGACAGTTTTAGGAATCGAAGTCTTCCTTCATATTACCGTGGTACCTCATCA GCTATAAGTTCAAAGGAGTTTCCAAGACCACCTTTTGTTAATCATGATTTCCATGAGGCA AATTCGATCCCTCAGTTGACAGCATTTAGTTTTTGTCCGTTAGTATTTGGACCCAGAGGT TGTGATTCAAAAAGTGAAGTATCATTTTCAAACACTGAAAATATTGTATCTGGTTGGAAC AAGGATGTAATGGTGCTTTTCAGCAACTCTTGGTGTGGGTTTTGTCAGCGAGCAGAGCTG GTGGTCCGTGAGTTACACCGATCATTTAAGAGCTTTTCAAGCTATTCAGATTCTGTATCT AGAAATGCTCAAGATGTCCACAATGAAGAGAAAAGTGAAGAATATGTGATGAAGGGCTTT CCTGCAATTTACATGATAGACTGCACATCAAATGAATGCCACCATTTACTAAAATCTGCA GGCATGGAAGAACTTTATCCGGCATTGTTACTCTTCCCTGCGGAGAACAAAAGTGCAATA GCATATGAAGGGGGAATGTCAGTGTCTCACTTAATCGAATTTTTGGAGTCTCATGTGAGC AATTCTCGCTATCTATTGGAATATAAAGGATTTATGTGGAAGAAGAGAATGACACCACAG CACGATGCACCACAGGCAATTCAGTTTAAAGTCAGTGATAAAGGTAGCGGCAATGTTGGT TCTGAGTTACCAAGTCATCCAGGTGTCGTTACAGGATCCATCCTTACTGCCACTAAGAAG CTCGGGACCGCAGTTCCATTTGATAATGCCAAGGTGCTCATTGTGTCAGCTGATTCTCAT GAAGGATTTCATGGCTTGATCATCAACAAGCGATTAAGCTGGGGTGTCTTCAAGGATCTG GATAGCTCGATGGAGCCTATTAAGCATGCACCACTTTTCTATGGTGGGCCTGTTGTGGTG CAGGGTTATCATCTTGTAAGCTTGTCAAGAGTATCCTCGGAGGGGTACATGCAAGTCATA CCAGGCGTCTATTATGGCAACATAGTTGCCACAAGCCGGGTAGTCACACGGATCAAGTTG GGCGAGCAATCTGTCAATGGCCTGTGGTTCTTCCTAGGCTACTCGGGGTGGGGATACAAC CAACTTTTTGATGAGCTAACTGAAGGAGCATGGCTTGTGAGTGTGAAGCCGATTGAGCAT TTGGACTGGCCGAAGAGTTGA

Peptide Sequence

PEP ID	Zm00001d013985_P007
PEP Infomation	pep chromosome:B73_RefGen_v4:5:27475179:27485252:1 gene:Zm00001d013985 transcript:Zm00001d013985_T007 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence	MTREPDGPLELVIENEEQTFGVGGQLTGSPWKVGFALANESVSEQIGNTNDGYRKCTMQK FHQFESFYGKLTAIAREYLLPPEIAKFGLITERSLLPSLDVVNEGNQDTWFVITHHMGCK TCSVIAKDGDDLRSIVQSHHNLGIKEVSADESSREAIFPRNRPSVVLFIDRLSHSSKVRD ESKLVLKLLRQYVQNNYPFHVSNGVPSSSTSKARSKAVPSLRNTGISDAYSQTARLSAWA SKLMALGDKMSVMVVNDGDSISYKSSSQGSGANPVYDVLTKLLDKARPGHKSKKTRISLV SRDVGLKMLSDHSEIKVVKSLSVEESEYKRTDDASATTANSNDDITEAFVDENTAKETEY INDGQVPSILEKSSATYPDEHDTAREFNDTEIEDKSISEASDMSVDLKEDAPNNADSSSE VGGMLHKHIMEKTVTEAFQILEHDERNLYTDQEESVSSNEQVDGSSFLSKKISKTEDAIY ENTFGLSEGLEESDRRCPHHATCSSSCVPVRDDTDFTDQVTSSISDYRFAGAFYFSDGGY RLLRTLTGGSRIPSLVIIDPVEQKHYIFPEESEYSYASLQNYLDSFRNRSLPSYYRGTSS AISSKEFPRPPFVNHDFHEANSIPQLTAFSFCPLVFGPRGCDSKSEVSFSNTENIVSGWN KDVMVLFSNSWCGFCQRAELVVRELHRSFKSFSSYSDSVSRNAQDVHNEEKSEEYVMKGF PAIYMIDCTSNECHHLLKSAGMEELYPALLLFPAENKSAIAYEGGMSVSHLIEFLESHVS NSRYLLEYKGFMWKKRMTPQHDAPQAIQFKVSDKGSGNVGSELPSHPGVVTGSILTATKK LGTAVPFDNAKVLIVSADSHEGFHGLIINKRLSWGVFKDLDSSMEPIKHAPLFYGGPVVV QGYHLVSLSRVSSEGYMQVIPGVYYGNIVATSRVVTRIKLGEQSVNGLWFFLGYSGWGYN QLFDELTEGAWLVSVKPIEHLDWPKS

Transcript Sequence

Transcript ID	Zm00001d013985_T007
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:27475179:27485252:1 gene:Zm00001d013985 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence	GAACCAGGTCCCCGGACGGGGACGGCTGAACTCGAGCTCGAGTCCTCGCGCGAAGTCGCT GGTGCTGCTGCTATACCCCGGCCGCCGCCATGCGCCTCCTCCTCACCGCGGCATGGCCGT GCGCTATCCTCCTCATCCTTGCCAGTGCGCTACAGTCGGCAACGGTGGCGAGTTCCGGTG CCGCTGCTGCCCGTCTGGAGTGGCAGGTCCTGACCAGGGCCAACTTCTCGTCCCAGATCC GGCTCCGCCCCCACGTCCTCCTCCTCGTCACGATGCCCTGGTATGGTGAGTCCAGATCAC TGATGGCTGACATAGAACGTTTGGTTGGTTCCAATGAGGAGCTTAGTCGCCTCAAGCTGA TGGTTGTATACAAGAATTCTGAAAAGTTGCTGACAGATGCTATTGGTGCTGCTGAAGGAA TAACTGTGGTATACTACCAACGTTCCATGCAATTCAAATATCAAGGGAAGCTTCGTGCAC ATGATATTCTGTCTGCAGTGCGCTATATCATGTCACTTGACCATGAGGAGTCCCCTTTTG AGGTTTTGCATACACAAGAAGATGTCGAGACCTTCATCGAATCTACCGATAAATCCATAC TCCTTTATGAATCATGTGGATGGTTCACCAGATTGGCTCATGGCGGGGGCAACCAAAGTT ATGAGGCAGCGTCATCAAATAACAACACAGAAAACGGAGGGAGTCACTTTGTTGAAACCT GAATATTGAGCCTGATAGCTATGAGCCTCCGACAGTAATATTGACACTACAGTAACCGTC AGTCAACCTGGCAACCTGGGCTCCTCCCTCCCTGACCCATGTACTTTTGTGAGGACGAGG AACTCCCTTGAACAGACGCATTTCATATGCTTGTGCAACACAAGCCGCCAGTGCTCAGTG CATCCAACACTCCTAGTTGCCATTACAACACAATATTTGCAAGGACCAGTTGCCAAATGC CAGTCTGGCCACATGGACATGACTTGTGGATCTCATCCTGGCCTTCTTAGTTCTTCACCA ACATGCATATGCTGCTTGGCTTGCTGTCTTCACTTCTGTCGCCACACTCACGAGCTGTTA CACGATTACGCCTCAAGCTAGGCTGCTTCTATAACAGCAAGTCCACAATACTCTAGTGTG ACCAGTGGCATAGCTAGGATTTTAATCTATGGTGGTCCAATTTAATATAAAACTCTTGTT AATGTTAACAATATAAATGCGGCATGTTATTAATATATAATTTACTAAAATATAAGACAA ACACATTAAAAAGTCTCAAAGCATTTTTAAAATGAGCACTAAACTCTGAAGTTTACTTAA AGTTGCTTACTGCCTAAATATGTATTACACTCTTGCCCAAAATTCTAGGGTGGTCCATGG TCCACATGGACCAACCCTTGGCTCCATCACTGAGTGTGACTAGTGAAAACGCCGATTTGT CGTTGATCCACTGCGTTCTCTTGCTGAGGCATCAAGCCAACATGACACCACAGCGAGTTG ACGAGGCAGCATTGATGCCTCTAGGAGTGAAAAGTTTATGCATATTCCAATGTAACAAGC AAGGCATCCCGGTGAGAGCTTTTGAAAATTTATCACCAAATGAGAGTATGAATTTTCTAG AGGCATATTGTTTTTTTATCCATCTATTCTCAGTTGGATGCTTTGTTGATTGTGCAGGCA ACTCATCACGATTTGCTTTAGATTCAGAATTAGGGAAAAAAGATAGTTTCATGAGAAAAC AAAACAACACACCCAATTACCAGGATATAATATGCCTTTTGGTTTACCCTTTTCAATTTA ATTTCCTCTAGACTTTGTCCATTCCATGCACTACTGGCTCCCTGATACACATTACACAAA TATTTTTGATTAATGATGTTGCTTTTCATCTTCTGATATCAGATTCTATATTCTTTGATG TGCCACAGTTGACATTTCTGGGAAGATAATGACCAGAGAACCAGATGGGCCACTAGAGCT TGTTATAGAGAATGAAGAACAAACCTTTGGAGTTGGGGGTCAGCTTACTGGTTCTCCTTG GAAAGTTGGTTTTGCCTTGGCAAACGAAAGTGTCTCTGAACAAATTGGAAACACAAATGA TGGATATAGAAAGTGTACAATGCAAAAGTTCCATCAATTTGAAAGTTTCTATGGAAAGCT TACTGCTATAGCAAGAGAATATTTGCTTCCCCCTGAAATAGCTAAATTTGGCCTTATAAC CGAAAGATCATTGTTGCCTTCACTGGATGTTGTTAATGAAGGCAACCAGGATACATGGTT TGTCATCACTCATCATATGGGATGCAAAACTTGTTCAGTTATTGCGAAAGATGGCGATGA TCTGAGAAGTATAGTGCAATCCCACCATAATCTTGGCATTAAGGAGGTTAGTGCTGATGA AAGTAGTAGAGAGGCTATCTTCCCCAGAAACAGGCCCTCTGTAGTTCTATTTATTGATAG ATTATCCCACTCCTCAAAAGTCAGAGATGAAAGCAAATTAGTCCTAAAGTTACTAAGGCA GTATGTGCAAAATAATTACCCATTTCATGTCAGTAATGGGGTTCCAAGTAGCAGTACTTC CAAAGCACGCTCAAAAGCTGTCCCTTCTTTGAGGAATACAGGTATCTCAGATGCCTATTC TCAAACAGCAAGGTTGAGTGCTTGGGCTTCTAAGCTTATGGCACTTGGGGACAAAATGTC AGTTATGGTGGTTAATGATGGAGATAGTATTTCTTACAAAAGTTCTAGCCAAGGTAGTGG TGCTAATCCTGTATATGATGTTCTCACTAAGTTGCTAGACAAAGCAAGACCAGGGCATAA GTCAAAGAAAACAAGAATAAGTTTAGTTTCACGAGATGTTGGCCTAAAGATGTTGTCAGA TCATTCTGAAATCAAAGTGGTTAAGTCTCTATCAGTTGAAGAGAGTGAATACAAAAGAAC TGATGATGCATCTGCCACTACAGCTAATTCCAATGATGATATTACTGAAGCTTTTGTGGA TGAAAACACAGCAAAAGAGACTGAATATATCAATGATGGACAAGTACCAAGTATACTTGA GAAATCTTCGGCAACTTACCCTGATGAACATGATACTGCTCGTGAATTTAATGATACAGA AATTGAGGACAAAAGCATAAGTGAAGCTTCAGATATGAGTGTTGATCTTAAGGAAGATGC CCCCAATAATGCAGATAGTAGTAGTGAGGTTGGAGGTATGCTGCATAAACACATAATGGA GAAAACAGTTACAGAAGCTTTTCAAATTTTGGAACATGATGAAAGAAACTTGTACACTGA CCAAGAGGAATCAGTATCATCAAACGAGCAAGTTGATGGATCTTCATTCCTGAGTAAAAA AATCAGTAAAACCGAAGATGCAATTTATGAAAACACATTCGGTCTATCTGAAGGATTAGA AGAAAGTGATAGAAGATGTCCCCATCATGCAACATGTAGCTCTTCCTGTGTTCCTGTAAG AGATGACACAGACTTTACTGATCAAGTAACTTCAAGTATATCTGATTACCGTTTTGCTGG TGCTTTCTACTTCTCTGATGGTGGTTACAGACTCCTGAGAACTTTAACTGGTGGATCAAG AATTCCGTCCCTGGTAATAATTGATCCAGTTGAACAAAAACATTATATATTTCCTGAGGA AAGCGAGTATAGCTATGCTTCTTTACAAAATTATCTTGACAGTTTTAGGAATCGAAGTCT TCCTTCATATTACCGTGGTACCTCATCAGCTATAAGTTCAAAGGAGTTTCCAAGACCACC TTTTGTTAATCATGATTTCCATGAGGCAAATTCGATCCCTCAGTTGACAGCATTTAGTTT TTGTCCGTTAGTATTTGGACCCAGAGGTTGTGATTCAAAAAGTGAAGTATCATTTTCAAA CACTGAAAATATTGTATCTGGTTGGAACAAGGATGTAATGGTGCTTTTCAGCAACTCTTG GTGTGGGTTTTGTCAGCGAGCAGAGCTGGTGGTCCGTGAGTTACACCGATCATTTAAGAG CTTTTCAAGCTATTCAGATTCTGTATCTAGAAATGCTCAAGATGTCCACAATGAAGAGAA AAGTGAAGAATATGTGATGAAGGGCTTTCCTGCAATTTACATGATAGACTGCACATCAAA TGAATGCCACCATTTACTAAAATCTGCAGGCATGGAAGAACTTTATCCGGCATTGTTACT CTTCCCTGCGGAGAACAAAAGTGCAATAGCATATGAAGGGGGAATGTCAGTGTCTCACTT AATCGAATTTTTGGAGTCTCATGTGAGCAATTCTCGCTATCTATTGGAATATAAAGGATT TATGTGGAAGAAGAGAATGACACCACAGCACGATGCACCACAGGCAATTCAGTTTAAAGT CAGTGATAAAGGTAGCGGCAATGTTGGTTCTGAGTTACCAAGTCATCCAGGTGTCGTTAC AGGATCCATCCTTACTGCCACTAAGAAGCTCGGGACCGCAGTTCCATTTGATAATGCCAA GGTGCTCATTGTGTCAGCTGATTCTCATGAAGGATTTCATGGCTTGATCATCAACAAGCG ATTAAGCTGGGGTGTCTTCAAGGATCTGGATAGCTCGATGGAGCCTATTAAGCATGCACC ACTTTTCTATGGTGGGCCTGTTGTGGTGCAGGGTTATCATCTTGTAAGCTTGTCAAGAGT ATCCTCGGAGGGGTACATGCAAGTCATACCAGGCGTCTATTATGGCAACATAGTTGCCAC AAGCCGGGTAGTCACACGGATCAAGTTGGGCGAGCAATCTGTCAATGGCCTGTGGTTCTT CCTAGGCTACTCGGGGTGGGGATACAACCAACTTTTTGATGAGCTAACTGAAGGAGCATG GCTTGTGAGTGTGAAGCCGATTGAGCATTTGGACTGGCCGAAGAGTTGAAAGGGTTCTGT GGACCTCACGCCTCAGCTGTTTCTTTAGGAAAATTCAGTTCATCTTGCACATATCTGCCA CTCTGCCCACACTGCACCGTGACATTGTACTGAGCTTTTTTTTGGAACATAGCAGCACTG TGTTTTCATACCATTCACACCGTACTATGGTCACATATTTTTTATACATAGTACTTTTC