Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d013949_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:25847189:25847818:-1 gene:Zm00001d013949 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ripening-related protein 3
Sequence

ATGGCAAGCTGCATGAAGCTGCTAGTGTTGCTTGCCCTCGTGCAGGTCCTGTTGTCCCTC
CACGTCCAAGTCTCCGAAGCCACTACCAATAAGCACCACCACCACCACCACAAGCCGGAG
GAGCCGGGCTCGGGCTCGGGCTCGGGCACCTGCCGACTCAGCGGCCACCTCCACGGCAAG
GCCGGGAACTGCAAGAAGCTGCACGGGTCGGACTGCTGCCAAGAGGGCCACAAGTACCCG
CAGTTCCGGTGCTCGCCCCCGGTGTCCGCCAGGACGCCGGCGACACTCACGCTGAACAGC
TTCGAGAAGGGCAAGGACGGGGGCGGCCCGTCGGAGTGCGACAACCGCTACCACAAGGAC
AGCGAGACGGTGGTCGCGCTGTCCTCCGGGTGGCTGCGCCTCGACGGCACGCGCCGGTGC
GGCCAGACGGTCAGGGTCACCGCCACCAACGGGCGCTCCGTGCTGGCCAGGGTCGTCGAC
GAGTGCGACTCGGTGAACGGGTGCGATGAGGAGCACAACTTCGAGCCGCCCTGCCCCAAC
GACGTCGTCGACGGGTCCCCCGCGGTGTGGAAGGCGCTGGGGATCAAGGAGAGCCTCGGT
GAGGTCAAGGTCACCTGGTCTGATGTCTGA

Peptide Sequence

PEP ID

Zm00001d013949_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:25847189:25847818:-1 gene:Zm00001d013949 transcript:Zm00001d013949_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ripening-related protein 3
Sequence

MASCMKLLVLLALVQVLLSLHVQVSEATTNKHHHHHHKPEEPGSGSGSGTCRLSGHLHGK
AGNCKKLHGSDCCQEGHKYPQFRCSPPVSARTPATLTLNSFEKGKDGGGPSECDNRYHKD
SETVVALSSGWLRLDGTRRCGQTVRVTATNGRSVLARVVDECDSVNGCDEEHNFEPPCPN
DVVDGSPAVWKALGIKESLGEVKVTWSDV

Transcript Sequence

Transcript ID

Zm00001d013949_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:25847189:25847818:-1 gene:Zm00001d013949 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ripening-related protein 3
Sequence

ATGGCAAGCTGCATGAAGCTGCTAGTGTTGCTTGCCCTCGTGCAGGTCCTGTTGTCCCTC
CACGTCCAAGTCTCCGAAGCCACTACCAATAAGCACCACCACCACCACCACAAGCCGGAG
GAGCCGGGCTCGGGCTCGGGCTCGGGCACCTGCCGACTCAGCGGCCACCTCCACGGCAAG
GCCGGGAACTGCAAGAAGCTGCACGGGTCGGACTGCTGCCAAGAGGGCCACAAGTACCCG
CAGTTCCGGTGCTCGCCCCCGGTGTCCGCCAGGACGCCGGCGACACTCACGCTGAACAGC
TTCGAGAAGGGCAAGGACGGGGGCGGCCCGTCGGAGTGCGACAACCGCTACCACAAGGAC
AGCGAGACGGTGGTCGCGCTGTCCTCCGGGTGGCTGCGCCTCGACGGCACGCGCCGGTGC
GGCCAGACGGTCAGGGTCACCGCCACCAACGGGCGCTCCGTGCTGGCCAGGGTCGTCGAC
GAGTGCGACTCGGTGAACGGGTGCGATGAGGAGCACAACTTCGAGCCGCCCTGCCCCAAC
GACGTCGTCGACGGGTCCCCCGCGGTGTGGAAGGCGCTGGGGATCAAGGAGAGCCTCGGT
GAGGTCAAGGTCACCTGGTCTGATGTCTGA