Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d013941_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:25536275:25537969:1 gene:Zm00001d013941 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein chloroplastic
Sequence	ATGAGAAAGCTGCGGAGCCAGAAAGCAGGCCCGCCGGCCGCCGCCGCCTCCCTCCGCTTC GCCGCGCTCCTCCAGTCGTGCGGCCGCACCGGAGACATCCGCCGAGGCCGCGCCCTACAC GCGCGCCTCCTGCTCACCGGCGCGGCCGCCGCGTCCACCTTCCTCGCCAACCACCTCATC ACCATGTACTCCCACTGCGCCGACGCGGTCTCCGCCGTCCGCGTGTTCGGCGTCGTGCCC CGCCCCAACCTCGTCTCCTGGACGACGCTCGTCTCGGGTCTCGTCCAGAACTCCATGCAC CACGACGCGCTCGCCGCCTTCGCCGCCATGCGCCGTGCGCATATCGCCCCCACTCAGTTC GCGCTCTCCAGCGCCGCGCGCGCCGCGGCCGCACTCTCCGCCCCGCGCCCCGGCACGCAG CTGCACTGCATCGGCATCAGGCTTGGCTTCGACAATGAGCTCTTCGTCGCGAGCAACCTC GCGGACATGTACTCCAAGTGCGGCCTCCTTCACGAGGCGTGTAGGGTGTTCGATCAAATG CCGCAAAAGGATGCTGTCACCTGGACTACCATGATCGATGGCTACGCGAAGAACGGGAGC CTAGAGGCCGCCATTCTGATTTTTCGGGATATGAAATGTGAGGGCCTGGTTGGAGCTGAC CAACATGTCTTCTGCAGTGCATTGAGTGCATCGGGAGGGCTCAAGGATGGATGGTTTGGT CGAAGCCTGCACTGTTGTATAATTAAGGCTGGGTTTGAACTGGAGACTGTTGTGAGGAAT GCGTTACTGGACATGTATGCTAAGTCTGGGGATTTGGAGAATGCCTCTCGTGTGGTGAGT ATTGATCCTGGAGGTTGGAATGTTGTGTCAGCTACCTCACTGATTGACGGTTACGTTGAG GCAGGTCGTATTGAGGAGGCTCTTGAGACATATACTGAGTTGGGGAGGCAAGGTGTTGAG CCCAATGAATTCACTTTTGCGAGCATGATTAAGGGCTGTGCCATGCATGATCTGCTCGAA CAAGGTGCCCAGCTGCATGCTCAAGTGCTCAAGACAAATTTGATCAGTGACTCATTTGTT GGTTCCACCCTTGTGTATATGTATGGAAATTGTGGCCTCATTAGTTTGTCCCTTCAGTTA TTTAATGAGATTGGATACCGTACTGAGATTGCCTGGAATGCGGTTATAAATGTTTATGCG CAGCACGGTCATGGGTGGGGAGCAATCCAAGCTTTTGATAGGATGACCTCAAGTGGTATC AGGCCAAATCACATTACATTTGTCTGCCTGCTGACTGCATGCAGTCATGCTGGATTAGTG GACGAAGGACTGGGATATTTCCACTCCATGAAGGATGCACATGGTATTGAGCCTAAAGCA GAACATTATTCATGTATCATTGATATGTATGGTCGAGCTGGGAGACTAGATGAAGCAGAA AAATTCATAAGTGAGATGCCAGTCAAACCCAGTGCTTATGCTTGGTGCTCCTTGCTTGGA GCATGCCGTATGCAAGGAAACAAGGAGTTGGGAGAGGTTGCTGCTCAGAATCTTATGAAA CTTGATCCAAATAACACCGGTATTCACATATCCCTTTCTGGGATATACACATCATTGGGC CAATGGGAGGATGTGAAGGCAGTCAAGAAGTCAATGAAGGATATCAGTATTAAAAAGCTG CCTGGTTTTAGCTAG

Peptide Sequence

PEP ID	Zm00001d013941_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:25536275:25537969:1 gene:Zm00001d013941 transcript:Zm00001d013941_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein chloroplastic
Sequence	MRKLRSQKAGPPAAAASLRFAALLQSCGRTGDIRRGRALHARLLLTGAAAASTFLANHLI TMYSHCADAVSAVRVFGVVPRPNLVSWTTLVSGLVQNSMHHDALAAFAAMRRAHIAPTQF ALSSAARAAAALSAPRPGTQLHCIGIRLGFDNELFVASNLADMYSKCGLLHEACRVFDQM PQKDAVTWTTMIDGYAKNGSLEAAILIFRDMKCEGLVGADQHVFCSALSASGGLKDGWFG RSLHCCIIKAGFELETVVRNALLDMYAKSGDLENASRVVSIDPGGWNVVSATSLIDGYVE AGRIEEALETYTELGRQGVEPNEFTFASMIKGCAMHDLLEQGAQLHAQVLKTNLISDSFV GSTLVYMYGNCGLISLSLQLFNEIGYRTEIAWNAVINVYAQHGHGWGAIQAFDRMTSSGI RPNHITFVCLLTACSHAGLVDEGLGYFHSMKDAHGIEPKAEHYSCIIDMYGRAGRLDEAE KFISEMPVKPSAYAWCSLLGACRMQGNKELGEVAAQNLMKLDPNNTGIHISLSGIYTSLG QWEDVKAVKKSMKDISIKKLPGFS

Transcript Sequence

Transcript ID	Zm00001d013941_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:25536275:25537969:1 gene:Zm00001d013941 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein chloroplastic
Sequence	ATGAGAAAGCTGCGGAGCCAGAAAGCAGGCCCGCCGGCCGCCGCCGCCTCCCTCCGCTTC GCCGCGCTCCTCCAGTCGTGCGGCCGCACCGGAGACATCCGCCGAGGCCGCGCCCTACAC GCGCGCCTCCTGCTCACCGGCGCGGCCGCCGCGTCCACCTTCCTCGCCAACCACCTCATC ACCATGTACTCCCACTGCGCCGACGCGGTCTCCGCCGTCCGCGTGTTCGGCGTCGTGCCC CGCCCCAACCTCGTCTCCTGGACGACGCTCGTCTCGGGTCTCGTCCAGAACTCCATGCAC CACGACGCGCTCGCCGCCTTCGCCGCCATGCGCCGTGCGCATATCGCCCCCACTCAGTTC GCGCTCTCCAGCGCCGCGCGCGCCGCGGCCGCACTCTCCGCCCCGCGCCCCGGCACGCAG CTGCACTGCATCGGCATCAGGCTTGGCTTCGACAATGAGCTCTTCGTCGCGAGCAACCTC GCGGACATGTACTCCAAGTGCGGCCTCCTTCACGAGGCGTGTAGGGTGTTCGATCAAATG CCGCAAAAGGATGCTGTCACCTGGACTACCATGATCGATGGCTACGCGAAGAACGGGAGC CTAGAGGCCGCCATTCTGATTTTTCGGGATATGAAATGTGAGGGCCTGGTTGGAGCTGAC CAACATGTCTTCTGCAGTGCATTGAGTGCATCGGGAGGGCTCAAGGATGGATGGTTTGGT CGAAGCCTGCACTGTTGTATAATTAAGGCTGGGTTTGAACTGGAGACTGTTGTGAGGAAT GCGTTACTGGACATGTATGCTAAGTCTGGGGATTTGGAGAATGCCTCTCGTGTGGTGAGT ATTGATCCTGGAGGTTGGAATGTTGTGTCAGCTACCTCACTGATTGACGGTTACGTTGAG GCAGGTCGTATTGAGGAGGCTCTTGAGACATATACTGAGTTGGGGAGGCAAGGTGTTGAG CCCAATGAATTCACTTTTGCGAGCATGATTAAGGGCTGTGCCATGCATGATCTGCTCGAA CAAGGTGCCCAGCTGCATGCTCAAGTGCTCAAGACAAATTTGATCAGTGACTCATTTGTT GGTTCCACCCTTGTGTATATGTATGGAAATTGTGGCCTCATTAGTTTGTCCCTTCAGTTA TTTAATGAGATTGGATACCGTACTGAGATTGCCTGGAATGCGGTTATAAATGTTTATGCG CAGCACGGTCATGGGTGGGGAGCAATCCAAGCTTTTGATAGGATGACCTCAAGTGGTATC AGGCCAAATCACATTACATTTGTCTGCCTGCTGACTGCATGCAGTCATGCTGGATTAGTG GACGAAGGACTGGGATATTTCCACTCCATGAAGGATGCACATGGTATTGAGCCTAAAGCA GAACATTATTCATGTATCATTGATATGTATGGTCGAGCTGGGAGACTAGATGAAGCAGAA AAATTCATAAGTGAGATGCCAGTCAAACCCAGTGCTTATGCTTGGTGCTCCTTGCTTGGA GCATGCCGTATGCAAGGAAACAAGGAGTTGGGAGAGGTTGCTGCTCAGAATCTTATGAAA CTTGATCCAAATAACACCGGTATTCACATATCCCTTTCTGGGATATACACATCATTGGGC CAATGGGAGGATGTGAAGGCAGTCAAGAAGTCAATGAAGGATATCAGTATTAAAAAGCTG CCTGGTTTTAGCTAG