Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d013918_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:24815087:24817536:1 gene:Zm00001d013918 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thylakoid lumenal 17.4 kDa protein chloroplastic
Sequence

ATGGCGTCGTCCTCCTGCCTCGCCTCGCCGTCTGGCGCCACGCTCTGCCGCCCGCGGCGG
CCGAGGTGCCGCGTGGCGTGCTCGGCGGCCGACGCCGGCGGGAGCACCGGGCCGGCGTGG
GCCAAGGGCGCGGGCCGCCTCGCGTGCGGCGTGCTGGCGGCTTGGTCCGTCGCGTCCGCG
TCCAATCCGGTCATTGCCGCGAGCCAGAGATTGCCTCCACTCTCAACGGAGCCAAACCGA
TGCGAGCGCGCATTCGTGGGGAACACAATTGGCCAGGCAAACGGGGTGTACGACAAGCCC
CTTGATCTCCGGTTCTGTGATTACACGAACGAGAAAACCAATCTAAAGGGCAAGTCTTTA
GCTGCAGCGCTGATGTCCGAGGCAAAGTTCGACGGCGCTGACATGTCTGAAGTTGTCATG
TCCAAAGCTTATGCTGTTGGTGCAAGTTTCAAAGGAACCGACTTCACAAATGCAGTGATA
GACCGCGTCAATTTTGAGAAGGCCGATCTCACAGGGGCGATCTTCAAGAACACGGTCTTG
TCAGGATCGACCTTCGATGATGCAAAGATGGACGATGTCGTGTTTGAGGACACGATCATC
GGCTACATTGACCTTCAGAAGCTATGCACGAACACCAGTATCAGCCCAGATGCGAGATTG
GAGCTGGGCTGTAGGTGA

Peptide Sequence

PEP ID

Zm00001d013918_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:24815087:24817536:1 gene:Zm00001d013918 transcript:Zm00001d013918_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thylakoid lumenal 17.4 kDa protein chloroplastic
Sequence

MASSSCLASPSGATLCRPRRPRCRVACSAADAGGSTGPAWAKGAGRLACGVLAAWSVASA
SNPVIAASQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPLDLRFCDYTNEKTNLKGKSL
AAALMSEAKFDGADMSEVVMSKAYAVGASFKGTDFTNAVIDRVNFEKADLTGAIFKNTVL
SGSTFDDAKMDDVVFEDTIIGYIDLQKLCTNTSISPDARLELGCR

Transcript Sequence

Transcript ID

Zm00001d013918_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:24815087:24817536:1 gene:Zm00001d013918 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thylakoid lumenal 17.4 kDa protein chloroplastic
Sequence

TCGCTGCGACTCCGCCTCATCGCCACCCTCTCTTCACACCCCACAGGCCAAGCCAGCCGC
ACCGCGCCGCACCGCATTTTGGACATGGCGTCGTCCTCCTGCCTCGCCTCGCCGTCTGGC
GCCACGCTCTGCCGCCCGCGGCGGCCGAGGTGCCGCGTGGCGTGCTCGGCGGCCGACGCC
GGCGGGAGCACCGGGCCGGCGTGGGCCAAGGGCGCGGGCCGCCTCGCGTGCGGCGTGCTG
GCGGCTTGGTCCGTCGCGTCCGCGTCCAATCCGGTCATTGCCGCGAGCCAGAGATTGCCT
CCACTCTCAACGGAGCCAAACCGATGCGAGCGCGCATTCGTGGGGAACACAATTGGCCAG
GCAAACGGGGTGTACGACAAGCCCCTTGATCTCCGGTTCTGTGATTACACGAACGAGAAA
ACCAATCTAAAGGGCAAGTCTTTAGCTGCAGCGCTGATGTCCGAGGCAAAGTTCGACGGC
GCTGACATGTCTGAAGTTGTCATGTCCAAAGCTTATGCTGTTGGTGCAAGTTTCAAAGGA
ACCGACTTCACAAATGCAGTGATAGACCGCGTCAATTTTGAGAAGGCCGATCTCACAGGG
GCGATCTTCAAGAACACGGTCTTGTCAGGATCGACCTTCGATGATGCAAAGATGGACGAT
GTCGTGTTTGAGGACACGATCATCGGCTACATTGACCTTCAGAAGCTATGCACGAACACC
AGTATCAGCCCAGATGCGAGATTGGAGCTGGGCTGTAGGTGATTAATTCACCAAGAGTTC
ATCCCCATGGTCCATGTTAATCTGTCTGTCTATAGAGCCGCCATGACAAGACGCGATCAA
AGACGTGACGCCGATTTTATCCATATCTATGCATGTACAAATTAAACCACTGTATGTCTC
AAGAATATCAGCAGCAATGTAACCATATACATAGAAGCACTATATATGGTTCCCACACGC
ATATATTATTATTACTGTTC