Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d013911_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:5:24431065:24437495:-1 gene:Zm00001d013911 gene_biotype:protein_coding transcript_biotype:protein_coding description:Malic enzyme

Sequence

ATGATCTCGCCGGCGATGTGTCGTTCGGCGCCGCGGCGGGCCGCGCAGGTCCGGCGCCTC
CTGTCGTCGGCCGCGCCCCCGGCGCACGCCGGCGCTGCCGTGCCTGGGCCCTGCATCGTG
CACAAGCGCGGCAACGACATCCTCCACGATCCGTGGTACAACAAGGATACGGCGTTCCCC
ATGACGGAGCGCGACCGCCTCGGTCTCCGCGGCTTGCTCCCGCCGCGGGTCATGTCCTTC
GAGCAGCAGTACGAGCGATTTATAAACTCTTTCCGGTCGCTGGAGCACAATACCCGCGGC
GAGCCTGACTCCATCGTCGCGCTGGCCAAATGGAGGATCCTCAACAGGTTGCACGACCGG
AACGAGACATTGTACTACAGGGTGCTAATTGACAATATCAAGGATTTTGCCCCGATAATA
TACACTCCCACTGTTGGCTTGGTCTGTGAAAATTACAGCGGTCTGTTCAGACGACCCCGT
GGGATGTATTTCAGTGCAAAGGATAAGGGGGAGATGATGTCAATGATTTACAACTGGCCA
GCAGAGAAGGTTGACATGATAGTTGTGACTGATGGGAGTCGCATTCTAGGCTTAGGTGAC
CTTGGTGTTCAGGGCATAGGTATACCTATTGGTAAACTGGATGTTTATGTTGCAGCTGCT
GGTATTAACCCACAGAAGGTTCTTCCAATAATGCTTGATGTGGGAACAAATAATGAAAAG
CTTCTGGAGGACAAGCTATATTTAGGACTGAGGCAACCTCGGCTGGAAGGAGAAGAATAC
TTGGCTGTTGTAGATGAATTCATGGAGGCTGTCCATGCACGTTGGCCTAAAGCAGTTGTG
CAGTTTCGCTCAAAATACTGCTCCCTTTCTGAAGTGATAAAATCACAGTTTGAAGACTTC
CAAATGAAATGGGCCTTTGAGACTCTTCAGAGGTATCGGAACCGATTTTGCATGTTCAAT
GATGACGTACAGGGGACAGCTGGAGTTGCTCTAGCAGGCCTACTTGGTGCTGTTAGAGCA
CAGGGCCGTCCTCTCCAGGATTTTACGAATCAAAAGATAGTCGTTGTGGGAGCTGGAAGT
GCTGGGATAGGTGTGCTTAGCATGGCTAAACAGGCAATGTTAAGGATGCCTGGGATCCAC
AGAACCGGGGAAGGGCATAATCAATTCTGGGTTCTGGACAAAGATGGCCTTATTACGAAA
GCTAGGAAGGACCTGGATTCTGCAGTGGCGCGTTTTGCCAGAGGCTTTGGTCCTGATGAG
GTCCCAGATCTCTATGAGGGGGCTAGTCTTGTTGAAGTGGTCAAGAAAGTTAAGCCCCAT
GTGCTTTTAGGACTATCTGGAGTTGGGGGCATATTTAATGAGGAGGTTCTCAAAGCTATG
AAAGAATCCGATTCCCCTCGGCCTGCAGTTTTTGCAATGTCCAACCCTACTACTAAAGCT
GAATGCACTCCCGATGATGTATTCAAGCATGTTGGAGATAAAGCGATATTTGCTAGTGGA
AGCCCTTTTAGTAATGTTTCTTTAGGAAATGGTAAATCTGGTTATGCTAATCAAGCAAAC
AACATGTATCTATTTCCTGGGATTGGTTTAGGTGCCCTTCTTTCAGGTGCCCGGCATGTT
TCAGATGGCATGCTTCAAGCAGCAGCTGAGTGCCTGGCATCATACATCACAGACGACGAA
ATTCGAAAAGGAATCCTCTTCCCTTCGGTCTCCAGTATTAGGCACATCACCGCACGTGTC
GGCGCAGCAGTCGTCCGTGCCGCTGTTGCTGAAGACCTGGCTGAGGGGTGCTGTGATGTG
GGTCCTAGGGAGCTTGGGAGTATGTCAGAGTCGGAAGCAGTGGACTACGTCGCTCGGAAG
ATGTGGTACCCTATTTACAGCCCTCTTGTGAGCGACAAATAA

Peptide Sequence

PEP ID

Zm00001d013911_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:5:24431065:24437495:-1 gene:Zm00001d013911 transcript:Zm00001d013911_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Malic enzyme

Sequence

MISPAMCRSAPRRAAQVRRLLSSAAPPAHAGAAVPGPCIVHKRGNDILHDPWYNKDTAFP
MTERDRLGLRGLLPPRVMSFEQQYERFINSFRSLEHNTRGEPDSIVALAKWRILNRLHDR
NETLYYRVLIDNIKDFAPIIYTPTVGLVCENYSGLFRRPRGMYFSAKDKGEMMSMIYNWP
AEKVDMIVVTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQKVLPIMLDVGTNNEK
LLEDKLYLGLRQPRLEGEEYLAVVDEFMEAVHARWPKAVVQFRSKYCSLSEVIKSQFEDF
QMKWAFETLQRYRNRFCMFNDDVQGTAGVALAGLLGAVRAQGRPLQDFTNQKIVVVGAGS
AGIGVLSMAKQAMLRMPGIHRTGEGHNQFWVLDKDGLITKARKDLDSAVARFARGFGPDE
VPDLYEGASLVEVVKKVKPHVLLGLSGVGGIFNEEVLKAMKESDSPRPAVFAMSNPTTKA
ECTPDDVFKHVGDKAIFASGSPFSNVSLGNGKSGYANQANNMYLFPGIGLGALLSGARHV
SDGMLQAAAECLASYITDDEIRKGILFPSVSSIRHITARVGAAVVRAAVAEDLAEGCCDV
GPRELGSMSESEAVDYVARKMWYPIYSPLVSDK

Transcript Sequence

Transcript ID

Zm00001d013911_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:24431065:24437495:-1 gene:Zm00001d013911 gene_biotype:protein_coding transcript_biotype:protein_coding description:Malic enzyme

Sequence

ACCACCGCACCGCACCGTCTCGGACGCGGCTGCAGCTCCGAGCATTGGATTCCGACCAAC
TGACCGAGCGGCGTGTCAGATGATCTCGCCGGCGATGTGTCGTTCGGCGCCGCGGCGGGC
CGCGCAGGTCCGGCGCCTCCTGTCGTCGGCCGCGCCCCCGGCGCACGCCGGCGCTGCCGT
GCCTGGGCCCTGCATCGTGCACAAGCGCGGCAACGACATCCTCCACGATCCGTGGTACAA
CAAGGATACGGCGTTCCCCATGACGGAGCGCGACCGCCTCGGTCTCCGCGGCTTGCTCCC
GCCGCGGGTCATGTCCTTCGAGCAGCAGTACGAGCGATTTATAAACTCTTTCCGGTCGCT
GGAGCACAATACCCGCGGCGAGCCTGACTCCATCGTCGCGCTGGCCAAATGGAGGATCCT
CAACAGGTTGCACGACCGGAACGAGACATTGTACTACAGGGTGCTAATTGACAATATCAA
GGATTTTGCCCCGATAATATACACTCCCACTGTTGGCTTGGTCTGTGAAAATTACAGCGG
TCTGTTCAGACGACCCCGTGGGATGTATTTCAGTGCAAAGGATAAGGGGGAGATGATGTC
AATGATTTACAACTGGCCAGCAGAGAAGGTTGACATGATAGTTGTGACTGATGGGAGTCG
CATTCTAGGCTTAGGTGACCTTGGTGTTCAGGGCATAGGTATACCTATTGGTAAACTGGA
TGTTTATGTTGCAGCTGCTGGTATTAACCCACAGAAGGTTCTTCCAATAATGCTTGATGT
GGGAACAAATAATGAAAAGCTTCTGGAGGACAAGCTATATTTAGGACTGAGGCAACCTCG
GCTGGAAGGAGAAGAATACTTGGCTGTTGTAGATGAATTCATGGAGGCTGTCCATGCACG
TTGGCCTAAAGCAGTTGTGCAGTTTCGCTCAAAATACTGCTCCCTTTCTGAAGTGATAAA
ATCACAGTTTGAAGACTTCCAAATGAAATGGGCCTTTGAGACTCTTCAGAGGTATCGGAA
CCGATTTTGCATGTTCAATGATGACGTACAGGGGACAGCTGGAGTTGCTCTAGCAGGCCT
ACTTGGTGCTGTTAGAGCACAGGGCCGTCCTCTCCAGGATTTTACGAATCAAAAGATAGT
CGTTGTGGGAGCTGGAAGTGCTGGGATAGGTGTGCTTAGCATGGCTAAACAGGCAATGTT
AAGGATGCCTGGGATCCACAGAACCGGGGAAGGGCATAATCAATTCTGGGTTCTGGACAA
AGATGGCCTTATTACGAAAGCTAGGAAGGACCTGGATTCTGCAGTGGCGCGTTTTGCCAG
AGGCTTTGGTCCTGATGAGGTCCCAGATCTCTATGAGGGGGCTAGTCTTGTTGAAGTGGT
CAAGAAAGTTAAGCCCCATGTGCTTTTAGGACTATCTGGAGTTGGGGGCATATTTAATGA
GGAGGTTCTCAAAGCTATGAAAGAATCCGATTCCCCTCGGCCTGCAGTTTTTGCAATGTC
CAACCCTACTACTAAAGCTGAATGCACTCCCGATGATGTATTCAAGCATGTTGGAGATAA
AGCGATATTTGCTAGTGGAAGCCCTTTTAGTAATGTTTCTTTAGGAAATGGTAAATCTGG
TTATGCTAATCAAGCAAACAACATGTATCTATTTCCTGGGATTGGTTTAGGTGCCCTTCT
TTCAGGTGCCCGGCATGTTTCAGATGGCATGCTTCAAGCAGCAGCTGAGTGCCTGGCATC
ATACATCACAGACGACGAAATTCGAAAAGGAATCCTCTTCCCTTCGGTCTCCAGTATTAG
GCACATCACCGCACGTGTCGGCGCAGCAGTCGTCCGTGCCGCTGTTGCTGAAGACCTGGC
TGAGGGGTGCTGTGATGTGGGTCCTAGGGAGCTTGGGAGTATGTCAGAGTCGGAAGCAGT
GGACTACGTCGCTCGGAAGATGTGGTACCCTATTTACAGCCCTCTTGTGAGCGACAAATA
ATAAATCCGAAGATCTCGATGCCTGCGCAGAAGCAGATGTTCCATTGAAGGAATGTATCG
GATTTGATATTTTTCTTAACCATCTCTAAATTAGCTGCTCATCTAGAAAGCATTTCGGCA
GAGATTGGTGCCCACGCATATGGCTAATGTATGGCTACATTCATTTGCTCTAGACATGAT
TTCGTCACCAGGGGACACTCAGTTT