Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d013891_T062
CDS Infomation

cds chromosome:B73_RefGen_v4:5:23993773:24008664:1 gene:Zm00001d013891 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tubulin-folding cofactor D
Sequence

ATGGAACTTGGTGCTAGTACTGATGAACTTCTTGACATTATCAAGCCTCTGTGTATCATC
ATCTACACCCTTGTCACAGTGTGCGGGTACAAGAGTGTCATCAGATTCTTCCCTCACCAG
GTTTCAGATCTTGAGCTCGCAGTTGCTCTTCTTGAGAAGTGTCATACAATGAGTTCAGCT
ACTGCTCTTAGGCAAGAGAGCACAGGAGAAATGGAGACTAAATGTGTTGTTCTATTGTGG
CTTTATATACTGGTCCTGATCCCATTTGACATATCCACTGTGGATACAAGCATTGCTACT
GCTGATAACGTCGATGGGCCTGAGGTCGTTCCACTGGTGACAAGAATACTGGACATCTGT
AAGGATTATCTCTCCAGTTCTGGTCCAATGAGAAGGATGTCAGGATTATTGCTTGCAAGG
CTCTTGACTCGTCCTGACATGGCAAAAGCTTTCAGCAGTTTTATGGACTGGGCACACAAG
ATGTTACTGTCTGTATCAGATGACTTTGTTGATCAATTTAGATCCATTGGTATAGTGGAA
GCTTTAGCATCAATATTTAAGATTGGTAACCGTAGAGCACTGCATGATGCTGTTTCTGGT
ACTTGGAGTGATTGTTCACTTGTGATGAAGACTAATGTCTCAGCCAGGAGTCCACTTCTT
AGAAAATTCCTGGTGAAACTGGCCCAGAGAGTTGGTCTCATCAGCTTGCCTCCACGTTTA
CCATCATGGCAGTATAAGTCAATTAGCAGTTCGTTGGGTGCAAACCTTTCAAGTTATACA
GCTGGAGAAGTGTATTCAAGTGGATCAAGGGAACAAGTTAACATTGATCAAATAGGCATG
TGTTTTTTGGAAGAAGATATGGATGTTCCAGAAATAGCAGAAGAGATTATCGACTTGCTA
TTGACTGGTTTGAGGGATTCAGATACAATTGTAAGGTGGTCTGCTGCCAAGGGAATTGGT
AGGATAACTGCATGTTTAACACCTGCATTGTCGGAAGATGTGCTATCATCAATATTGCAA
CTTTTTTCTCCTGGAGAGGGTGATGGCTCCTGGCATGGAGGCTGTTTAGCCTTGGCTGAA
CTTGCTCGGAGAGGGTTATTGTTACCTTCTAGCTTTCCTGATGTTGTTCCTGTTATAATA
AAGGCTTTACACTATGATGTAAGAAGAGGTCCACATAGCATTGGGTCACATGTAAGAGAT
GCAGCAGCATATGTATGTTGGGCATTTGGTCGAGCTTATACCAATTATGATATGAAGGCT
GTTTTGGAACAACTTGCTCCCCACCTTCTAACCGTTGCTTGTTATGATCGAGAGGTTAAT
TGTAGAAGAGCTGCTTCTGCTGCCTTTCAAGAGAATGTTGGAAGACAGGGAACTTTCCCA
CATGGCATTGATATTGTGAATACGACAGATTACTTTGCACTGGCTTCCCGATCAAACTCT
TATCTGAATGTTGCTGTTTCTGTTGCTCAGTGCAAGGAGTATCTTTATCCCTTTGCAGAT
GAGCTGCTTTGCAATAAAATAACTCACTGGGAGAAAAGCTTAAGAGAGCTGGCAGCTCAG
GCCCTTGCTTTGCTTGTACAATATGATATGAATTACTTTGGTGGACATGCCCTTGAAAAG
TTAGTTCCGTGCACTCTATCAACGGACTTGTGTACTCGACATGGAGCCACTTTAGCTGCT
GGTGAGGTTGCTTTAAAGTTGTACCAGCTTGGTTTTACTTTTACTACAGACATGCAGAAA
ACTTTGTCAGGTATTGTTCCCGCAATCGAAAAGGCGCGTCTTTATCGGGGCAAAGGAGGA
GAGATCATGCGCTCCGCTGTTTCTCGATTCATTTCATGCATTTCTATAGCTGGGATATCC
TTGAATGACAGGACAAAGAAATGTTTGTTGGAAACCCTTAATGAGAATTTGCGTCATCCC
AATTCTCAAATACAGTGTGCTGCTGTTGAGGCATTAAAGCATTTTATTCCAACATACCTG
GTATCTTCTGGTGAAAAGATTGCTAGTGATATTATCTCAAAATATGTGGCACTTCTAGAT
GACCCAAATGTGGCTGCAAGACGAGGAGCTGCACTGGCCCTTGGAATATTACCATTCAAA
TTCTTGATGTTGAAATGGATGCCTGTCATGAGTAAACTCTGTAGCTCATGCACCATTGAG
GATAAGCCTGATGACCCTGATGCTGAAGCACGTGTGAACTCTGTTAGGGGGCTAATTTCG
GTTTGCGAAACACTAACAGCATCTTTTGATCAGCTCTCAAATGGAGATTCTCTATATGCA
TACATAAAAGATTATGTCATGCGAGCTTTATTTAGAGCACTCGATGATTATGCTGTGGAC
AACAGAGGAGATGTGGGTTCTTGGGTACGTGAAGCAGCAATGGATGCGCTAGTACGATGC
ATGTTCATCCTCTGCAAGAGAGATATTGTTGCTTTGAGAGCAGTGTCAGCCACTGGCCAT
GACTCTGAACTGGGTGATATGGAAGTAAATGCAAGTAGTACTGCATACCGGCTATTTGAT
TCTGGTATTGCACAGGATCTGGTAGCAGGCATTGCAAAACAAGCAGTTGAGAAAATAGAT
AAGATAAGAGAAATAGCTATCAAAACCCTGCAGAGAATTCTGTACCACCAGGAACACCTC
ATCCCATTTATACCTCACAGGGAGTTGCTTGAAGAAATTATTCCCAACAGCAGAGATTTG
GAGTGGGCGGTTCCTACTGTGTCATATCCACGATTGGTGAAACTTCTTCAGGTTAGCTAT
TATAGCAAGTCTGTGCTCTCAGGGCTCGTGATTTCTACAGGTGGTTTGCAGGAGTCTTTG
AAGAAAGCTTCAATGTCAGCTTTGGTAGGGTATCTCCAAGATTCAGACATCAATACTAAT
TGTGAAGGGAAAAGTAGAGAGTATCTATTGAGTTGTGATCTTCTATGGGGCCTCCAGCAC
TACCAGAAATGTGACCGTGTAATTACTCCCATGTTCAAGACTATTGAGGCTCTCTTCAGT
AAAAAGGTTTTCTTGAACAAGGAGGGGTACAGTGAGTTCTACAGTGGACTGGTAGATTCC
GTGAGCTCTGAACTGAAGGGATCCAAGGATTTTACAAAGTTATGTGCAGGTCTCTCGATC
CTTGGGTACATTTCTTCCGAGTCAGATGGAACTTGCACCAAGGCATTTTCCCAACTCCTC
ACATTCCTAGGCCACAGATACCCCAAGATCCGAAAAGCTGCAGCCGACCAGGTGTACCTT
GTGCTGCTGCAAAATGATGACCTTATTGTGTCGGAGAATATGGATAAAGCCCAGGAATTA
CTTGCGGAGACGTGCTGGGAAGGGGATGTGGAGGAAGCAAGGCGTAGGAGGTCAGAAATC
AACGAGATGGCTGGTTTTAGGGTCACCACTTCACAGAAGTCTGGAAAGCAAGAAACTAGA
ACGGTCGCCGCTTCGACGGATGAGAACAGATCTTATTCGTCATTGGTCGATTTCAGCGGA
TACTAA

Peptide Sequence

PEP ID

Zm00001d013891_P062
PEP Infomation

pep chromosome:B73_RefGen_v4:5:23993773:24008664:1 gene:Zm00001d013891 transcript:Zm00001d013891_T062 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tubulin-folding cofactor D
Sequence

MELGASTDELLDIIKPLCIIIYTLVTVCGYKSVIRFFPHQVSDLELAVALLEKCHTMSSA
TALRQESTGEMETKCVVLLWLYILVLIPFDISTVDTSIATADNVDGPEVVPLVTRILDIC
KDYLSSSGPMRRMSGLLLARLLTRPDMAKAFSSFMDWAHKMLLSVSDDFVDQFRSIGIVE
ALASIFKIGNRRALHDAVSGTWSDCSLVMKTNVSARSPLLRKFLVKLAQRVGLISLPPRL
PSWQYKSISSSLGANLSSYTAGEVYSSGSREQVNIDQIGMCFLEEDMDVPEIAEEIIDLL
LTGLRDSDTIVRWSAAKGIGRITACLTPALSEDVLSSILQLFSPGEGDGSWHGGCLALAE
LARRGLLLPSSFPDVVPVIIKALHYDVRRGPHSIGSHVRDAAAYVCWAFGRAYTNYDMKA
VLEQLAPHLLTVACYDREVNCRRAASAAFQENVGRQGTFPHGIDIVNTTDYFALASRSNS
YLNVAVSVAQCKEYLYPFADELLCNKITHWEKSLRELAAQALALLVQYDMNYFGGHALEK
LVPCTLSTDLCTRHGATLAAGEVALKLYQLGFTFTTDMQKTLSGIVPAIEKARLYRGKGG
EIMRSAVSRFISCISIAGISLNDRTKKCLLETLNENLRHPNSQIQCAAVEALKHFIPTYL
VSSGEKIASDIISKYVALLDDPNVAARRGAALALGILPFKFLMLKWMPVMSKLCSSCTIE
DKPDDPDAEARVNSVRGLISVCETLTASFDQLSNGDSLYAYIKDYVMRALFRALDDYAVD
NRGDVGSWVREAAMDALVRCMFILCKRDIVALRAVSATGHDSELGDMEVNASSTAYRLFD
SGIAQDLVAGIAKQAVEKIDKIREIAIKTLQRILYHQEHLIPFIPHRELLEEIIPNSRDL
EWAVPTVSYPRLVKLLQVSYYSKSVLSGLVISTGGLQESLKKASMSALVGYLQDSDINTN
CEGKSREYLLSCDLLWGLQHYQKCDRVITPMFKTIEALFSKKVFLNKEGYSEFYSGLVDS
VSSELKGSKDFTKLCAGLSILGYISSESDGTCTKAFSQLLTFLGHRYPKIRKAAADQVYL
VLLQNDDLIVSENMDKAQELLAETCWEGDVEEARRRRSEINEMAGFRVTTSQKSGKQETR
TVAASTDENRSYSSLVDFSGY

Transcript Sequence

Transcript ID

Zm00001d013891_T062
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:23993773:24008664:1 gene:Zm00001d013891 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tubulin-folding cofactor D
Sequence

AGACAATGGAACTTGGTGCTAGTACTGATGAACTTCTTGACATTATCAAGCCTCTGTGTA
TCATCATCTACACCCTTGTCACAGTGTGCGGGTACAAGAGTGTCATCAGATTCTTCCCTC
ACCAGGTTTCAGATCTTGAGCTCGCAGTTGCTCTTCTTGAGAAGTGTCATACAATGAGTT
CAGCTACTGCTCTTAGGCAAGAGAGCACAGGAGAAATGGAGACTAAATGTGTTGTTCTAT
TGTGGCTTTATATACTGGTCCTGATCCCATTTGACATATCCACTGTGGATACAAGCATTG
CTACTGCTGATAACGTCGATGGGCCTGAGGTCGTTCCACTGGTGACAAGAATACTGGACA
TCTGTAAGGATTATCTCTCCAGTTCTGGTCCAATGAGAAGGATGTCAGGATTATTGCTTG
CAAGGCTCTTGACTCGTCCTGACATGGCAAAAGCTTTCAGCAGTTTTATGGACTGGGCAC
ACAAGATGTTACTGTCTGTATCAGATGACTTTGTTGATCAATTTAGATCCATTGGTATAG
TGGAAGCTTTAGCATCAATATTTAAGATTGGTAACCGTAGAGCACTGCATGATGCTGTTT
CTGGTACTTGGAGTGATTGTTCACTTGTGATGAAGACTAATGTCTCAGCCAGGAGTCCAC
TTCTTAGAAAATTCCTGGTGAAACTGGCCCAGAGAGTTGGTCTCATCAGCTTGCCTCCAC
GTTTACCATCATGGCAGTATAAGTCAATTAGCAGTTCGTTGGGTGCAAACCTTTCAAGTT
ATACAGCTGGAGAAGTGTATTCAAGTGGATCAAGGGAACAAGTTAACATTGATCAAATAG
GCATGTGTTTTTTGGAAGAAGATATGGATGTTCCAGAAATAGCAGAAGAGATTATCGACT
TGCTATTGACTGGTTTGAGGGATTCAGATACAATTGTAAGGTGGTCTGCTGCCAAGGGAA
TTGGTAGGATAACTGCATGTTTAACACCTGCATTGTCGGAAGATGTGCTATCATCAATAT
TGCAACTTTTTTCTCCTGGAGAGGGTGATGGCTCCTGGCATGGAGGCTGTTTAGCCTTGG
CTGAACTTGCTCGGAGAGGGTTATTGTTACCTTCTAGCTTTCCTGATGTTGTTCCTGTTA
TAATAAAGGCTTTACACTATGATGTAAGAAGAGGTCCACATAGCATTGGGTCACATGTAA
GAGATGCAGCAGCATATGTATGTTGGGCATTTGGTCGAGCTTATACCAATTATGATATGA
AGGCTGTTTTGGAACAACTTGCTCCCCACCTTCTAACCGTTGCTTGTTATGATCGAGAGG
TTAATTGTAGAAGAGCTGCTTCTGCTGCCTTTCAAGAGAATGTTGGAAGACAGGGAACTT
TCCCACATGGCATTGATATTGTGAATACGACAGATTACTTTGCACTGGCTTCCCGATCAA
ACTCTTATCTGAATGTTGCTGTTTCTGTTGCTCAGTGCAAGGAGTATCTTTATCCCTTTG
CAGATGAGCTGCTTTGCAATAAAATAACTCACTGGGAGAAAAGCTTAAGAGAGCTGGCAG
CTCAGGCCCTTGCTTTGCTTGTACAATATGATATGAATTACTTTGGTGGACATGCCCTTG
AAAAGTTAGTTCCGTGCACTCTATCAACGGACTTGTGTACTCGACATGGAGCCACTTTAG
CTGCTGGTGAGGTTGCTTTAAAGTTGTACCAGCTTGGTTTTACTTTTACTACAGACATGC
AGAAAACTTTGTCAGGTATTGTTCCCGCAATCGAAAAGGCGCGTCTTTATCGGGGCAAAG
GAGGAGAGATCATGCGCTCCGCTGTTTCTCGATTCATTTCATGCATTTCTATAGCTGGGA
TATCCTTGAATGACAGGACAAAGAAATGTTTGTTGGAAACCCTTAATGAGAATTTGCGTC
ATCCCAATTCTCAAATACAGTGTGCTGCTGTTGAGGCATTAAAGCATTTTATTCCAACAT
ACCTGGTATCTTCTGGTGAAAAGATTGCTAGTGATATTATCTCAAAATATGTGGCACTTC
TAGATGACCCAAATGTGGCTGCAAGACGAGGAGCTGCACTGGCCCTTGGAATATTACCAT
TCAAATTCTTGATGTTGAAATGGATGCCTGTCATGAGTAAACTCTGTAGCTCATGCACCA
TTGAGGATAAGCCTGATGACCCTGATGCTGAAGCACGTGTGAACTCTGTTAGGGGGCTAA
TTTCGGTTTGCGAAACACTAACAGCATCTTTTGATCAGCTCTCAAATGGAGATTCTCTAT
ATGCATACATAAAAGATTATGTCATGCGAGCTTTATTTAGAGCACTCGATGATTATGCTG
TGGACAACAGAGGAGATGTGGGTTCTTGGGTACGTGAAGCAGCAATGGATGCGCTAGTAC
GATGCATGTTCATCCTCTGCAAGAGAGATATTGTTGCTTTGAGAGCAGTGTCAGCCACTG
GCCATGACTCTGAACTGGGTGATATGGAAGTAAATGCAAGTAGTACTGCATACCGGCTAT
TTGATTCTGGTATTGCACAGGATCTGGTAGCAGGCATTGCAAAACAAGCAGTTGAGAAAA
TAGATAAGATAAGAGAAATAGCTATCAAAACCCTGCAGAGAATTCTGTACCACCAGGAAC
ACCTCATCCCATTTATACCTCACAGGGAGTTGCTTGAAGAAATTATTCCCAACAGCAGAG
ATTTGGAGTGGGCGGTTCCTACTGTGTCATATCCACGATTGGTGAAACTTCTTCAGGTTA
GCTATTATAGCAAGTCTGTGCTCTCAGGGCTCGTGATTTCTACAGGTGGTTTGCAGGAGT
CTTTGAAGAAAGCTTCAATGTCAGCTTTGGTAGGGTATCTCCAAGATTCAGACATCAATA
CTAATTGTGAAGGGAAAAGTAGAGAGTATCTATTGAGTTGTGATCTTCTATGGGGCCTCC
AGCACTACCAGAAATGTGACCGTGTAATTACTCCCATGTTCAAGACTATTGAGGCTCTCT
TCAGTAAAAAGGTTTTCTTGAACAAGGAGGGGTACAGTGAGTTCTACAGTGGACTGGTAG
ATTCCGTGAGCTCTGAACTGAAGGGATCCAAGGATTTTACAAAGTTATGTGCAGGTCTCT
CGATCCTTGGGTACATTTCTTCCGAGTCAGATGGAACTTGCACCAAGGCATTTTCCCAAC
TCCTCACATTCCTAGGCCACAGATACCCCAAGATCCGAAAAGCTGCAGCCGACCAGGTGT
ACCTTGTGCTGCTGCAAAATGATGACCTTATTGTGTCGGAGAATATGGATAAAGCCCAGG
AATTACTTGCGGAGACGTGCTGGGAAGGGGATGTGGAGGAAGCAAGGCGTAGGAGGTCAG
AAATCAACGAGATGGCTGGTTTTAGGGTCACCACTTCACAGAAGTCTGGAAAGCAAGAAA
CTAGAACGGTCGCCGCTTCGACGGATGAGAACAGATCTTATTCGTCATTGGTCGATTTCA
GCGGATACTAAAGATCGCCTTACATCCTATTTTCGACGAAAGGTGTCGATTGTACTAGTG
CACAATGCCGAATATCACTAAACGTTTGAATGAGCGGGGTTGCTTGTGGATTTTCTTTTT
TTTTTTTTTGTGGTGGGTGTTTTCTTTCTTTTCTTCTTTTTGTGTGTGAGTAGAAGAGTT
AGGCTGTTTTCAGCAACGTCCTCTAAATTTCATCCTCTAAAGAAATATTCTTTGTCCTTT
ACAGTACACTCTAAAAGATTTCATTCTCTATATCTTCTTTATCTCCAACAACTTTC