Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d013838_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:5:22093632:22100553:-1 gene:Zm00001d013838 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence	ATGGAGGAGCCCACGGAGTCCAGGCCAGCTGGCGCGGAGGATCTCGCGAACGGCGCGAAA GACCCGGAGGGGCCTCCGCCGGAGGTTGAGGAGGAGGAAGTGGAGGAGCCGCCACGATCG GCGACGGCGAAGCAGGAGGAGGCGAAGGAGGTACTAGGGTCGGAGGGGTCTCGCCCGTTC ACCATGCGGGAGCTGCTCGGCGAACTCAGGGAGGACGGCGAGACGGCGGTCGGCGGCAGC ACCGCGAGATCTGCGTTCGGCGACGGGAACGGGGTCGGATCCGCTGATGCCGAGGGCTCG TCCTACAGCCAAGATAGCGCACAGTTTTCATCACACCATGATGTAGCGATGGACTTGATA AATAGTGTAACTGGAGTTGACGAGGAAGGACGTTCTCGCCAAAGGATTCTTTCTTTTGCT GCTAAAAGATACGTAAATGCAATTGAAAGTAATCCTGACGACCCTGATGCATATTATAAT TGGGCTCTAGTCCTCCAGGAGAGCGCAGACAATGTGGATCCCAATTCGAGTTCCTCTAAA GATGCATTGCTGGAGGAGGCTTGCAAAAAGTATGCTGAAGCTACTCGACTTAGTCCAACT CTTTATGATGCATATTATAACTGGGCTATTGCTATTGCTGATCGGGCTAAAATGCGAGGT CGGACAAAAGAAGCCGAAGAACTCTGGAAGCAGGCAATACTGAATTATGAGAAGGCTGTC CAGCTTAATTGGAATAGCCCACAGGTTAGCATTAAATCATTATTTTATCTTGAGTTCTTG AGTGCAGATTATATTATAAAACGAAAATATAAAAGGCTCCGATCTGAGTTAATGGACGAT CAATGTGCACATATAACTGATATAATGACCATCATGGTTCAGTGGAGTTAA

Peptide Sequence

PEP ID	Zm00001d013838_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:5:22093632:22100553:-1 gene:Zm00001d013838 transcript:Zm00001d013838_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence	MEEPTESRPAGAEDLANGAKDPEGPPPEVEEEEVEEPPRSATAKQEEAKEVLGSEGSRPF TMRELLGELREDGETAVGGSTARSAFGDGNGVGSADAEGSSYSQDSAQFSSHHDVAMDLI NSVTGVDEEGRSRQRILSFAAKRYVNAIESNPDDPDAYYNWALVLQESADNVDPNSSSSK DALLEEACKKYAEATRLSPTLYDAYYNWAIAIADRAKMRGRTKEAEELWKQAILNYEKAV QLNWNSPQVSIKSLFYLEFLSADYIIKRKYKRLRSELMDDQCAHITDIMTIMVQWS

Transcript Sequence

Transcript ID	Zm00001d013838_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:22093632:22100553:-1 gene:Zm00001d013838 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence	GACCACGCGGCCGTGCGGGCGCGAGACGGGACCAGTGAGTCAGTGACCACCACGCGCTCG TGGCTACCGGCTTCGCTCCCAGATCCCGCCGCGCGCGCGAGCCCCGAGGACTGACCATGG AGGAGCCCACGGAGTCCAGGCCAGCTGGCGCGGAGGATCTCGCGAACGGCGCGAAAGACC CGGAGGGGCCTCCGCCGGAGGTTGAGGAGGAGGAAGTGGAGGAGCCGCCACGATCGGCGA CGGCGAAGCAGGAGGAGGCGAAGGAGGTACTAGGGTCGGAGGGGTCTCGCCCGTTCACCA TGCGGGAGCTGCTCGGCGAACTCAGGGAGGACGGCGAGACGGCGGTCGGCGGCAGCACCG CGAGATCTGCGTTCGGCGACGGGAACGGGGTCGGATCCGCTGATGCCGAGGGCTCGTCCT ACAGCCAAGATAGCGCACAGTTTTCATCACACCATGATGTAGCGATGGACTTGATAAATA GTGTAACTGGAGTTGACGAGGAAGGACGTTCTCGCCAAAGGATTCTTTCTTTTGCTGCTA AAAGATACGTAAATGCAATTGAAAGTAATCCTGACGACCCTGATGCATATTATAATTGGG CTCTAGTCCTCCAGGAGAGCGCAGACAATGTGGATCCCAATTCGAGTTCCTCTAAAGATG CATTGCTGGAGGAGGCTTGCAAAAAGTATGCTGAAGCTACTCGACTTAGTCCAACTCTTT ATGATGCATATTATAACTGGGCTATTGCTATTGCTGATCGGGCTAAAATGCGAGGTCGGA CAAAAGAAGCCGAAGAACTCTGGAAGCAGGCAATACTGAATTATGAGAAGGCTGTCCAGC TTAATTGGAATAGCCCACAGGTTAGCATTAAATCATTATTTTATCTTGAGTTCTTGAGTG CAGATTATATTATAAAACGAAAATATAAAAGGCTCCGATCTGAGTTAATGGACGATCAAT GTGCACATATAACTGATATAATGACCATCATGGTTCAGTGGAGTTAAGTGTGAATCCATT GAGAATGTCGCACTCACACACATGGTTAGACAATAGAATGATGCCCTTTTGTAGTGACTA GGTCAATGTCTATGTGTTGCAGCGGGAACAAAAATTAAGACAAAAGTAATCCAGGTTTGC ACATGTATTGTATCATGACAGAAAAACAATATTCACAACATGTCAGTTTGTAGCTGACTG TCTCATATATGAGTGTTAAATTGCATTTGACTGATAGTCATAATGGGTATCGGATGGTGA GGACTGAGGAGCCTGGGAGCACATCTATTTGATTATTGTTAGGCATTGAACAAAAGCAAT AACATTCACTTAGTACAGTGTTTGAAATGCGCACTTGTTAGAGAAGCAAATCAATGAACA GTTGGCATGCACAAACAAAATGTTGCAGCTTCCCTATGTACCTTTATTGCCAAAGTGCAA ATGGATAATGCAATGATGATCTGTGCGAGCATGTCCCCCAGCGGATTTCAACATGCCTGC ACCTCTTCATCGTAGCCACTGCTGCTACCCTTTCATTTGCTCACCTCAAAGTGCAGGCAT GCAAAGCCACTGCTGCTACCATTTCACATGCCTGCACCTCTTGATCTGTGCGAGAAATGA GAAATATTTCTTCAATTTTTTCTTTACAAAATGAAGAAGCGTAGAGATCATATGTTCATT CGTGCAATGCATTCCACTCCTTTCCTTCAATGCTGCCTCCTTCCTTTGTCTATTCACGGT GAATTCAAGCTCGAATTTAGATGTTGAGGCTACTTGGCAGTTTGGAAATTGACGTACCGA ATGGCCATGCTCGCAGGCGAGGGTGAGAGGCCGACCTCACACATCTTACTGCATTGCACA CCCCTACTTGCGCCACAACCTCATCACCGGCCTTGCAATGCTATCCACTGCCGTCTTTAC ACAGTTCTGCGAGTGCATCCAACTTCGAACCCGAGACAGCTCAAGCCGAGGGGGACGCGA CTCAGGGCGGGGCGGGGTTGCGGGCGCTAGGGGAGACATATTGAGACGGTGGACCAAGGA AAAATTGCGGCTCTCCTCACTGTAGGATCTTGCCTAAGGGACCTGCCACATGCGATTTAG TGCTGCTCCCCGGTGGGCCTGTGTCATGCCGTTGTGAGATCTGGGAGATAGCCATGGGAT GTGCAGGATTTGCCCCCATTGTTGGTGGAGGGAGGGAGGGAGGGAGACGGTTACCAGCTC TTTGCTGTGTGAGTAGGAGGCGTTGAAGAAGGGGAATGCAAATGAGATTGGGCGAGCACC ACCAGATGAGCAAGAGATGTTTGCGACAGGTGTCACAGGCGAGCACCACCACGGGCTCAT GTAGCGGCGTAAATCAATGCTCGTGTGATTTGCACCTATTGCAAAACTGGGGTGGAAGTG CCAGGTCCACCGGTCGGCGTCAAGGGACTTTGGCTGCAGCTCGCAGGGTCGCCGCACAAA GACCTGTTGGATGAAAGCGTTCAAGTCTTTTTATGTGTAATAGATAGCTGTTTTTTCTTC TAATTTATCAATTAAAGAAAGAAAAAACTTGTTGCTGGTCAAGAAATCAGAGCTTGCCAT GGCTTATTCTTACTGTTTAAATTCCTGTGATCTTTTGTTACCAAAATTCTTTATAAATCA ATATAAAGAAATATTTTTTTATGAAAGGGTCTTGTTTTTTCGGGCCCATTTCTCTCCACC AGCATTTGACCAAATCCATGAAATGAGATGTTCTGATATCGGTCTATTTTGGACCTTCTT TCTTTTTTTAATTTAAAGATGCACAGCTCTTCCGCGCTTTCGAGGAAAAAAAAGAGATGT TCTGATATCACTTCAACTTGAAACTTCTAATCTTGAATTTTTATTAGCCAGTGTTGCTGC TTTCTTAATTTCCTTCCTTTTCGATTGCAGGCTCTCAATAACTGGGGTCTTGGGCTACAG GAGCTGAGTGCAATTGTTCCTGCCCGGGATAAACAGACCATCATAAAAACAGCTATCAGT AAGTTCCGTGCTGCAATTCAGCTGCAATTTGATTTCCATCGGGCAATATACAACCTCGGA ACTGTCTTGTATGGTTTAGCTGAGGATACCATGAGATCTGGGAAGCCAGATGTCTCCCCA AATGAGCTTTACAGTCAGTCTGCTATCTATGTTGCAGCTGCTCATGCTCTGAAGCCAAAT TACTCGGTCTATCGTAGTGCCTTGCGACTAGTCCGCTCAATGTTGCCTCTGCCATATCTC AAAGTGGGGTATTTGACTGCTCCTCCAGCTAACAATTCCATCGCACCACACGGGGATTGG GAGGTATCACAGTTCATTTTGAATCATGAGGGCCTCCAGCAGGCTGATGCTTCTGACCAG CCTCCATCGCAATCCCCTGGGCATTTGGACAGGGGCAGAAAGCCTGTCAGAATAAACGTT GCAGATATTGTTTCAGTGTCAGCATGTGCCGATTTAACTTTACCAAGTGGTGCTGGCCTC TGTATAGAAACTATTCATGGTCCTACGTTCTTGGTTGCCCATAGTTGGGAGGCTCTTGAC GGCTGGCTAGATGCCATACGCCTTGTCTACACTATTTTTGCGAGAGGGAAGAGCGATGTG CTTGCCGGTATTATTACTGGTTAAATGGCTTGCTGCAGGAGGGAAGAGCGATGAACTAGC CGGGTGTTGTTACTGCCACTGGAGAGGCGCGAAGTTTTGGTGATTCAGCGTCAGCCTTAT CAGTTAAATGCCCCCTTCGATTTGTTAGTATGCCTCCCATCTGTGATGTCAGTCTTCCTA GATATAGGGTATATCAATCATATATTCGGTTGTAACTCGTACTTTCCAGTGATTGGCGAT AGGTCCGTTTTTTCTTTGTAAAAGTGGCCGTGTTACTGTATTATGCATTCACAGCATATG TATCGGACATTCTTTAAGTTTGATTATATTTCTCTG