Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d013827_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:5:21506335:21508854:1 gene:Zm00001d013827 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MYB-related-transcription factor 99 description:TRF-like 5
Sequence

ATGTTGTTGCTTACTGAAATTAATGAATGGATGAATGATGAGATTGTGGTTACTCCATTT
GCCGTAGGGGAGTCAGCGAAGCGTGAAATTTTAGCTAAGCCTGTGCAGGTTGGATCCGCT
TCTCATCAATCAATTCGGACGCAAGTTGCTGATAACGCGAGCAATGCCAATAAAGCTGAT
GGCGCCCGGCGAGATGAGGCACATCCTTCTAATTCTAATGTAAACTATGAGGCTGATAGT
GATCGTGAAAGTATGGTTGGGCACCAAAATGCATCGGTTAAAGGAGCAGAGGGTCAACTT
TCAGAGAAGTCTGTCTTTACTTCTAAAAAGCGCGTTCTTGTGGAGAGAATTCCGAAGTGG
GATAGCTCTGATGATGATCAGCCAGTGCGGAAGCGCAAGTTAGATCCATTTGAGAGAAAA
CCATATCCTTCTCCTACATGTGCATATAAGATCAGAAAGAAATGGAGTAAGATAGAGATA
GAAACCTTGCTGGAAGGGGTGGACAAGTATGGCATAGGCAACTGGAAAGATATCAAATTA
GCTTACCCTGGTGTCTTTGAGGAGAGATCAACGGTAGATCTGAAGGACAAGTTTAGAAAT
TTGGGAAAGCGCCACCATGAATCGTCTTGA

Peptide Sequence

PEP ID

Zm00001d013827_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:5:21506335:21508854:1 gene:Zm00001d013827 transcript:Zm00001d013827_T004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MYB-related-transcription factor 99 description:TRF-like 5
Sequence

MLLLTEINEWMNDEIVVTPFAVGESAKREILAKPVQVGSASHQSIRTQVADNASNANKAD
GARRDEAHPSNSNVNYEADSDRESMVGHQNASVKGAEGQLSEKSVFTSKKRVLVERIPKW
DSSDDDQPVRKRKLDPFERKPYPSPTCAYKIRKKWSKIEIETLLEGVDKYGIGNWKDIKL
AYPGVFEERSTVDLKDKFRNLGKRHHESS

Transcript Sequence

Transcript ID

Zm00001d013827_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:21506335:21508854:1 gene:Zm00001d013827 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MYB-related-transcription factor 99 description:TRF-like 5
Sequence

ATTCTCGAGTTCATCGCGAGCAACCGCCGTATCCCCCACGCCGTGTTCAACTCCTTCATC
GCCTCCCAATCCCCACCCTCCGCCTTCTCCCGCACCTCACAGCGCCTCCGAAAAGCCCTA
GTGCTCCGCGCCCTCGACGCCGCCCTCTACACCGTGGGCGCCTCCTGCTCCTCCAGCCTC
CTCCTCCACAAGGCGCGAAAGGTCCTCGCCGACCCCGACGCAGCCGCCTGCTTCCCCCAC
CAGATTCCTTTTACAGAAAATGAAGAAAACGATGAGGCTAGGGCTGCGGTGGCCGATCTC
AAGCGCCTCCTCGACCTTGAGTGGGCCAACCTCCCGCCCTCCACGCTCGAGCTCGTCGCC
GGGGACGGGTCCCACCAGACTGGTGCCGCTGCCGACCACACCATGCGTACAAAGCTTCGC
CTGTTCGGTACCTCTATTCACAAAGCTAGCCTAGTCCATATCCTATTTGGTTTTGTTTTT
GCTTTTGAAACAATTGTCCTGTTTACCTTTTCCAATGTTGTTGCTTACTGAAATTAATGA
ATGGATGAATGATGAGATTGTGGTTACTCCATTTGCCGTAGGGGAGTCAGCGAAGCGTGA
AATTTTAGCTAAGCCTGTGCAGGTTGGATCCGCTTCTCATCAATCAATTCGGACGCAAGT
TGCTGATAACGCGAGCAATGCCAATAAAGCTGATGGCGCCCGGCGAGATGAGGCACATCC
TTCTAATTCTAATGTAAACTATGAGGCTGATAGTGATCGTGAAAGTATGGTTGGGCACCA
AAATGCATCGGTTAAAGGAGCAGAGGGTCAACTTTCAGAGAAGTCTGTCTTTACTTCTAA
AAAGCGCGTTCTTGTGGAGAGAATTCCGAAGTGGGATAGCTCTGATGATGATCAGCCAGT
GCGGAAGCGCAAGTTAGATCCATTTGAGAGAAAACCATATCCTTCTCCTACATGTGCATA
TAAGATCAGAAAGAAATGGAGTAAGATAGAGATAGAAACCTTGCTGGAAGGGGTGGACAA
GTATGGCATAGGCAACTGGAAAGATATCAAATTAGCTTACCCTGGTGTCTTTGAGGAGAG
ATCAACGGTAGATCTGAAGGACAAGTTTAGAAATTTGGGAAAGCGCCACCATGAATCGTC
TTGAGGCTTAGTGGCGCTGTGCTTTTGCTCTGCCCTGGAGATATTTTATGTTGATGGCAG
TGGTATGCAAAAGAAGGCCTATGTAAGGTGCATGGAGACATTTGGGTTTCGTGCCAAGGA
TATTGTTGACTTGTTGAGTGCACTGTTCTTAAGGCGTCGCTTAGACGTCCAGGCGGAGGT
CCAACGCCTAGCCGCCTTGCCCGCCTACCGTACCTAGGCGATGGTCCAACGCCTTGTATC
GTCTTACCGCTTTAAAAAACATCGTTGATGGTTGAGTGTTTAAAGATAAGTAACTGGAAC
CCCACATGATGGCATGTTGTCACGGGCGTGCACAACTCGAGCACCCATCTGGCTCAGAAA
AGCACCATGGGAAGATAGAACTCTGGCATTGGTGGAATCTGATGCAATGGTCATTGTAAT
TCTGAATTGAAAATTTTGAACCAGTGACACACTAATTGTTCAAGAAGCTCAATATCGTTT
GCTCCAGGAGTCAGAAGCAGGTCCCCTGTTAGACCTTTCAG