Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d013798_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:20529397:20576095:-1 gene:Zm00001d013798 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cycloartenol synthase
Sequence	ATGTGGAGGCTAAAGATCGGCGAGAGGCCAAGCAACCCGCTGCTTCGCTCGCCCAATGGC TTCCTTGGGAGAGAGGTGTGGGAGTTCGACCCCGCCGCAGGCACGCCGGAGGAGCGCGCC GAGGTCGATAGGCTGCGCCAGGAGTACACCCGCAACCGCTTCACGCGACGGCAATGCAGT GACCTTCTCATGCGCATGCAGGAAAGTACATATGCAAAACAGAACCTTCATAATACAAAC CTTCCGGCTATCAAGATTGACCAGGATTCAGACGTCACAGAAGAAACTATACTAATTACA TTGAGGCGTGCTCTTAATCAATATTCTTCTTTGCAAGGACCTGCTGGGCATTGGCCTGGG GATTACGGCGGGATTTCGTTCATTTTACCACTCATGATATTTGCATTACATGTCACACGA TCAATGGATGAAGTTTTGTCAATAGAGCATATACGTGAGATATGTCGCTACATTTATAAC ATGCAGAATGAGGATGGAGGCTGGGGAACACATACCTTGGGACCAAGCTCCATGTTTGGC ACATGTGTAAACTATGCAACCTTAAGGATTCTAGGAGAGGTGCTTGATGGAGAAAATGAT GCATTATCCAAAGGGCGTTCTTGGATTTTGTCTCATGGAAGTGCAACTGCAGCACCACAA TGGGCAAAGATATATCTCTCGTTCTCACTAGATAAGCAAAATATTCTTGCGATGAACATC TTTGGCATTGTAAATATATGGTTGTGGAGTGAAATTAATGCAATCCATTGTTGCTTTCAA CAAAAGATGATAGGTGTATACGATTGGGCTGGGAACAATGCAATCATTCCTGAGTTATGG ATGCTTCCACATTTTCTCCCAATTCATCCTGGAAGGTTTTGGTGCTTTTGTCGGATGGTT TACATGCCAATGGCTTACATTTATGGAAAAAAGTTTGTTGGGCCTATCACTACAACTATT TTAGAAATAAGAAATGAGCTCTACAATATACCATATAATAAGATCAACTGGAACAAGGCT TGCAATTCTTGTGCCAAGGAAGACCTTATCTATGAGCCTTCATGGTTGCAAAGTATTGCA ATGGCTTATTTGAATAAGTTTATAGAACCATTATCAAATCTTTGGCCAATGAATAAGCTA CGAGAAAGAGCTATGAGTGACCTCATGGAACATATCCACTATGAAGATGAAACCAGCAAC TATGTTGGCTTATGCCCTATAAACAAGGCATTAAATATGATATGTTGTTGGATAGAAAAA CCAAACTCAAATGAATTTAGACAACATCTCCCAAGGATTCATGATTTCCTATGGCTTGGA GAAGACGGAATGAAGTCAAAGGTTATCAAAAACATTCCTGATTACAAGAGCTACTACCGT GAAAGAACTAAAGGTTCTTGGACTCTATCCAATGGAGAAAACTTTTGGCCTATTGCTGAT ACAACTGCTGAGGCACTTAAGGCAATACTGTTGCTGTCTAACATTCCTTCAGAACTTGTC GGGGATCCAATAAAACAAGAACGACTATATGATGCCGTTGATTGCCTCCTTTCTTTCGTG AACAAAGATGGTACATTATCATCAGCTGAATGTAAACGAACAACTTCATGGGTGGAGTTT ATCAATCCTTCTGAGAGTTTTCGTAATATCATCGTCGACTATCCATATCCTGAATGCACA TCATCATTAATTCAAGCTTTAGTGCTGTTTAGAGGCAAGCATCCAATATATCGTCGTGAT GAGATAGACAAAATTATCAAAAGTGGTGCATCATTCATTGAGAAAGTACAACGAAAGGAT GGGTCCTGGTATGGTTCTTGGGCTGTGTGTTTCACTTATGCAACATTCTTTGCTATAAAA GGATTAGTTGCTGCAGGAAGAACATACCGGAATAGTTTGGCTATTAGGAAAGCATGCAAC TTCTTGTTGTCAAAGCAACTAGGAACCGGTGGATGGGGAGAAAACTATCTTGGTTGTCAA ATTGAGGAGTATGTTGACAGTGGCAGTCCACATGGAGTCAACACTGCACAGGCGATGCTA GCTTTACTCTACGCTGGGCAGGTCGAACAAGACCCAGCGCCACTATACCGTGCTGCAAAA GAATTAATTAACATGCAGATGGAGAACGGAGAATTTCCCCAACAAGAAATTGTTGGCAAC TTCAACTCCTCACTTTTCTTCAATTACCCGAACTACCGAAACTTATTTCCCATCTGGGCT TTAGGAGAATTTCGCCGCCGACTTGTTGCAAAAAAAGGTTAA

Peptide Sequence

PEP ID	Zm00001d013798_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:20529397:20576095:-1 gene:Zm00001d013798 transcript:Zm00001d013798_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cycloartenol synthase
Sequence	MWRLKIGERPSNPLLRSPNGFLGREVWEFDPAAGTPEERAEVDRLRQEYTRNRFTRRQCS DLLMRMQESTYAKQNLHNTNLPAIKIDQDSDVTEETILITLRRALNQYSSLQGPAGHWPG DYGGISFILPLMIFALHVTRSMDEVLSIEHIREICRYIYNMQNEDGGWGTHTLGPSSMFG TCVNYATLRILGEVLDGENDALSKGRSWILSHGSATAAPQWAKIYLSFSLDKQNILAMNI FGIVNIWLWSEINAIHCCFQQKMIGVYDWAGNNAIIPELWMLPHFLPIHPGRFWCFCRMV YMPMAYIYGKKFVGPITTTILEIRNELYNIPYNKINWNKACNSCAKEDLIYEPSWLQSIA MAYLNKFIEPLSNLWPMNKLRERAMSDLMEHIHYEDETSNYVGLCPINKALNMICCWIEK PNSNEFRQHLPRIHDFLWLGEDGMKSKVIKNIPDYKSYYRERTKGSWTLSNGENFWPIAD TTAEALKAILLLSNIPSELVGDPIKQERLYDAVDCLLSFVNKDGTLSSAECKRTTSWVEF INPSESFRNIIVDYPYPECTSSLIQALVLFRGKHPIYRRDEIDKIIKSGASFIEKVQRKD GSWYGSWAVCFTYATFFAIKGLVAAGRTYRNSLAIRKACNFLLSKQLGTGGWGENYLGCQ IEEYVDSGSPHGVNTAQAMLALLYAGQVEQDPAPLYRAAKELINMQMENGEFPQQEIVGN FNSSLFFNYPNYRNLFPIWALGEFRRRLVAKKG

Transcript Sequence

Transcript ID	Zm00001d013798_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:20529397:20576095:-1 gene:Zm00001d013798 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cycloartenol synthase
Sequence	ATGTGGAGGCTAAAGATCGGCGAGAGGCCAAGCAACCCGCTGCTTCGCTCGCCCAATGGC TTCCTTGGGAGAGAGGTGTGGGAGTTCGACCCCGCCGCAGGCACGCCGGAGGAGCGCGCC GAGGTCGATAGGCTGCGCCAGGAGTACACCCGCAACCGCTTCACGCGACGGCAATGCAGT GACCTTCTCATGCGCATGCAGGAAAGTACATATGCAAAACAGAACCTTCATAATACAAAC CTTCCGGCTATCAAGATTGACCAGGATTCAGACGTCACAGAAGAAACTATACTAATTACA TTGAGGCGTGCTCTTAATCAATATTCTTCTTTGCAAGGACCTGCTGGGCATTGGCCTGGG GATTACGGCGGGATTTCGTTCATTTTACCACTCATGATATTTGCATTACATGTCACACGA TCAATGGATGAAGTTTTGTCAATAGAGCATATACGTGAGATATGTCGCTACATTTATAAC ATGCAGAATGAGGATGGAGGCTGGGGAACACATACCTTGGGACCAAGCTCCATGTTTGGC ACATGTGTAAACTATGCAACCTTAAGGATTCTAGGAGAGGTGCTTGATGGAGAAAATGAT GCATTATCCAAAGGGCGTTCTTGGATTTTGTCTCATGGAAGTGCAACTGCAGCACCACAA TGGGCAAAGATATATCTCTCGTTCTCACTAGATAAGCAAAATATTCTTGCGATGAACATC TTTGGCATTGTAAATATATGGTTGTGGAGTGAAATTAATGCAATCCATTGTTGCTTTCAA CAAAAGATGATAGGTGTATACGATTGGGCTGGGAACAATGCAATCATTCCTGAGTTATGG ATGCTTCCACATTTTCTCCCAATTCATCCTGGAAGGTTTTGGTGCTTTTGTCGGATGGTT TACATGCCAATGGCTTACATTTATGGAAAAAAGTTTGTTGGGCCTATCACTACAACTATT TTAGAAATAAGAAATGAGCTCTACAATATACCATATAATAAGATCAACTGGAACAAGGCT TGCAATTCTTGTGCCAAGGAAGACCTTATCTATGAGCCTTCATGGTTGCAAAGTATTGCA ATGGCTTATTTGAATAAGTTTATAGAACCATTATCAAATCTTTGGCCAATGAATAAGCTA CGAGAAAGAGCTATGAGTGACCTCATGGAACATATCCACTATGAAGATGAAACCAGCAAC TATGTTGGCTTATGCCCTATAAACAAGGCATTAAATATGATATGTTGTTGGATAGAAAAA CCAAACTCAAATGAATTTAGACAACATCTCCCAAGGATTCATGATTTCCTATGGCTTGGA GAAGACGGAATGAAGTCAAAGGTTATCAAAAACATTCCTGATTACAAGAGCTACTACCGT GAAAGAACTAAAGGTTCTTGGACTCTATCCAATGGAGAAAACTTTTGGCCTATTGCTGAT ACAACTGCTGAGGCACTTAAGGCAATACTGTTGCTGTCTAACATTCCTTCAGAACTTGTC GGGGATCCAATAAAACAAGAACGACTATATGATGCCGTTGATTGCCTCCTTTCTTTCGTG AACAAAGATGGTACATTATCATCAGCTGAATGTAAACGAACAACTTCATGGGTGGAGTTT ATCAATCCTTCTGAGAGTTTTCGTAATATCATCGTCGACTATCCATATCCTGAATGCACA TCATCATTAATTCAAGCTTTAGTGCTGTTTAGAGGCAAGCATCCAATATATCGTCGTGAT GAGATAGACAAAATTATCAAAAGTGGTGCATCATTCATTGAGAAAGTACAACGAAAGGAT GGGTCCTGGTATGGTTCTTGGGCTGTGTGTTTCACTTATGCAACATTCTTTGCTATAAAA GGATTAGTTGCTGCAGGAAGAACATACCGGAATAGTTTGGCTATTAGGAAAGCATGCAAC TTCTTGTTGTCAAAGCAACTAGGAACCGGTGGATGGGGAGAAAACTATCTTGGTTGTCAA ATTGAGGAGTATGTTGACAGTGGCAGTCCACATGGAGTCAACACTGCACAGGCGATGCTA GCTTTACTCTACGCTGGGCAGGTCGAACAAGACCCAGCGCCACTATACCGTGCTGCAAAA GAATTAATTAACATGCAGATGGAGAACGGAGAATTTCCCCAACAAGAAATTGTTGGCAAC TTCAACTCCTCACTTTTCTTCAATTACCCGAACTACCGAAACTTATTTCCCATCTGGGCT TTAGGAGAATTTCGCCGCCGACTTGTTGCAAAAAAAGGTTAAGATGGGTATCTTAAGCTA TTTCTAATAATTGTATTTGGGATACAAGTATCCATGTATATTTTATTTTTCGTGATGATG GGAATGTAACACAAAATAAAATTTATATTTAGTACGTATATGTTAATATTTGTAAGATTA TCACAAACAAGTTGATAATCATCAGTGATCTGGTTCCTCAAATTCAATAACAAGGATGCA AAATGTTTGGTAGCAAGAATACTGCAATGGAAT