Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d013722_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:18543126:18544969:-1 gene:Zm00001d013722 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABI3-VP1-transcription factor 5 description:B3 domain-containing protein
Sequence

ATGAGAAAACCTTCCAAGGGATGCAAGGAGAGGGACGCGAATTACCACCGGAATGATCAC
ACAGATGACCATGGCGGCAAGCACTTCTTCAAGGTTTTGGTTGGTGATTTCCACAAAAGA
TTGGTCATACCGGGTAAATTTGCTAAACATTTCGCAGACAAGGTAGAAGGAAGTATTACG
CTTGAATCACTTGGTGGGTATACTTTTGATGTCCAAGTTGCAAAGGATCTGGGCAGAGTA
GTGCTTCAATCCGCCGGGTGGAAGTCGTTTGTTAGTGCCCATTACTTGAAAAAGATGGAC
TTCTTGGTATTCAAGTACGACGGGATGTCTCGGATGAAGGTTCTAATATTCGATCCTAGT
GGTTGCGAGAAAGTACCACCAAGTTTTGTCGCAGAAAATGCTAGTAGTGGTGGAGTTAAG
AGAGAAGCACCCATTGGCCTTTCAGGCAGCTATGCTCGTCTTCCCATGAAAGCACCAGAA
ACTAAAAGGAAATCATGGAAGCAAATGGACAGGAGTAGGATCATTATGAATGCATCAAGC
TCCCTGTCCAACTCATCAGGAGGCATGGCATCTTCAGAAGATGATGAAGCACATCCTGTT
CCGAGTTACATGCTCCCACAAGGCACCAGGCTTGATAGATTACAAAAGAAGATTCTGAAA
GAGCGACTCCGAGACATTTGTTCTGAAATCCCCATCTATGTGTGTGTCTTGAAGAAGACA
AACATTTCTGGACACTCTCAAGCCCTGGAATTCTCCATCAACTATTCTGATTTATATCTT
CCATTCAAGAGCAGAGAGTTGATTCTTCGGTGCCATGGCAATAGCTGGGAAGTGCTGTTA
CGCGTTAAGCTTCCGGGAGCTCCACGCAAATGCAAAAGGCTTTGCAAAGGGTGGGCACGG
TTTGCAGGCGACAACAGTTTGCAGCTGGGAGATATCTGCCTCTTTGAGCCACTTGATACC
AAGAATGGCACGATGAATGTGCATATCATTCGCAGAGACTGA

Peptide Sequence

PEP ID

Zm00001d013722_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:18543126:18544969:-1 gene:Zm00001d013722 transcript:Zm00001d013722_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABI3-VP1-transcription factor 5 description:B3 domain-containing protein
Sequence

MRKPSKGCKERDANYHRNDHTDDHGGKHFFKVLVGDFHKRLVIPGKFAKHFADKVEGSIT
LESLGGYTFDVQVAKDLGRVVLQSAGWKSFVSAHYLKKMDFLVFKYDGMSRMKVLIFDPS
GCEKVPPSFVAENASSGGVKREAPIGLSGSYARLPMKAPETKRKSWKQMDRSRIIMNASS
SLSNSSGGMASSEDDEAHPVPSYMLPQGTRLDRLQKKILKERLRDICSEIPIYVCVLKKT
NISGHSQALEFSINYSDLYLPFKSRELILRCHGNSWEVLLRVKLPGAPRKCKRLCKGWAR
FAGDNSLQLGDICLFEPLDTKNGTMNVHIIRRD

Transcript Sequence

Transcript ID

Zm00001d013722_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:18543126:18544969:-1 gene:Zm00001d013722 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABI3-VP1-transcription factor 5 description:B3 domain-containing protein
Sequence

GTATATGATACCAAGATGAGAAAACCTTCCAAGGGATGCAAGGAGAGGGACGCGAATTAC
CACCGGAATGATCACACAGATGACCATGGCGGCAAGCACTTCTTCAAGGTTTTGGTTGGT
GATTTCCACAAAAGATTGGTCATACCGGGTAAATTTGCTAAACATTTCGCAGACAAGGTA
GAAGGAAGTATTACGCTTGAATCACTTGGTGGGTATACTTTTGATGTCCAAGTTGCAAAG
GATCTGGGCAGAGTAGTGCTTCAATCCGCCGGGTGGAAGTCGTTTGTTAGTGCCCATTAC
TTGAAAAAGATGGACTTCTTGGTATTCAAGTACGACGGGATGTCTCGGATGAAGGTTCTA
ATATTCGATCCTAGTGGTTGCGAGAAAGTACCACCAAGTTTTGTCGCAGAAAATGCTAGT
AGTGGTGGAGTTAAGAGAGAAGCACCCATTGGCCTTTCAGGCAGCTATGCTCGTCTTCCC
ATGAAAGCACCAGAAACTAAAAGGAAATCATGGAAGCAAATGGACAGGAGTAGGATCATT
ATGAATGCATCAAGCTCCCTGTCCAACTCATCAGGAGGCATGGCATCTTCAGAAGATGAT
GAAGCACATCCTGTTCCGAGTTACATGCTCCCACAAGGCACCAGGCTTGATAGATTACAA
AAGAAGATTCTGAAAGAGCGACTCCGAGACATTTGTTCTGAAATCCCCATCTATGTGTGT
GTCTTGAAGAAGACAAACATTTCTGGACACTCTCAAGCCCTGGAATTCTCCATCAACTAT
TCTGATTTATATCTTCCATTCAAGAGCAGAGAGTTGATTCTTCGGTGCCATGGCAATAGC
TGGGAAGTGCTGTTACGCGTTAAGCTTCCGGGAGCTCCACGCAAATGCAAAAGGCTTTGC
AAAGGGTGGGCACGGTTTGCAGGCGACAACAGTTTGCAGCTGGGAGATATCTGCCTCTTT
GAGCCACTTGATACCAAGAATGGCACGATGAATGTGCATATCATTCGCAGAGACTGA