Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d013716_T007
CDS Infomation	cds chromosome:B73_RefGen_v4:5:18304814:18308806:-1 gene:Zm00001d013716 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable E3 ubiquitin-protein ligase ARI2
Sequence	ATGACGAGCGACGACGAGGAGGCGTGCGACTACTTCTACGACGACGACGACGACGCCGAG GAAGACGCCGCCGCCGGACTGGAGGAGGACTCTTCGCTTCCAACGCCGGAGGGCCGCGCG GACTACTGGAAACAAGATCTGTCTACGGTGATGAACTTGCTCAATATAAATCAACATCAA GCACGAGCCCTCCTCATTCACCACCGATGGAGTATGGATGGCATCTATGATTCTCTAGAC ATGGGGCGAGAACGCATGCTCAGAAATTCAGGGATCGTGCTGCAGGAGGTCAACAGCATT GCAGCAGCTGGCTCAATGACACCATGGAGAACAGTGACCTGCAAAGTGTGTTTTGAGGAC TTCTCCATGGATGCTGTTTCGACCATGGACTGTGGGCACTGCTTCTGCAATGACTGTTGG ACGGAGTATTTCCACGCTGCGGTAGAGAGCGGGAAAAAGCAAATTCGGTGCATGGAGGTC AAGTGCTCGGCTTTCTGCGATGAGGACCTCGTGCGGTTTCTCCTTGTCCAAAAGTATCCA GACATGGCCAAGAACTTCAATCGCTTCCTGCTTGGGTCCTACCTTGAGGACAATGCCTCT GTGAAGTGGTGCCCTAGCACCCCGAACTGTGGCCATGCCATTCGCGTGGGCACTGATGAG CGCTGCTGTGAGGTGGAATGCCCCTGCGGCTTAAGCTTCTGCTTTAACTGCATGGGGCAT GCGCACTCGCCTTGCCCGTGCACCATATGGGAGAAATGGAATGCCAGCCGGTCCGAGGGA GAGAACATCAAGTGGATCCTCGCTAACACCAAGAGCTGCCCCAAATGCTTCAAGGCCATC GAGAAGAACGGCGGCTGCAACCTTGTCCGCTGCAAGTGCGGACAGTGTATGTGTTGGCTC TGCGGCGGAGGTACCGGCCAAGATCACACGTGGAACAGCATTACCGGCCACAGCTGCAAC CGCTACGAGGAGGAGATCTGTGTAGAGACCGTGCACACCGGCAGGCAGCAGATGCAGCGG TACAAGCACTACCACGACCGGTTCAAGATCCACGGCGACTCGTCGTACGGCGTGGAGAAG CAGAAGCTTGGGGCGGCCATCGAGGAGCGGGTGCGGCTTCTTGAGTCGGACCGCGAGCGC CCGCTCGCCATCCGCGACGGCGACTGGCTGACCCGGGCGCACCGGCGGCTGCTGGTTTCT CGGCAGGTGCTGTCGCGGTCGTACGTGTTCGCATACTACATGTTCGGCGGCCACGAGCTG CGGACGCGCCCGGCCGAGCGGGCGAACCTGGGCGTGGCGCGTAACCTGTTCGAGCACCAG CAGGAGCAGCTGGAGCGGCACGTAGAGCACCTGTCCAGGTCGCTCGCGGAGTCGGCCGAC CTGGCGGGGGCTCCGGACGCGGAGATCGTGAAGCAGAAGCAGACGGCGATCACGCTCACC AAGACCGTGGAGCGGCTGTGCGGGGAGATGTACAAGTGCATCCAGGACGAGCTGCTGACG CTGCTCGTGGAGCCCATGAGCATCGCGGCGTACAGGCCGGACGGCCCCGACAGAGCGAAG CCCGCGATCTGA

Peptide Sequence

PEP ID	Zm00001d013716_P007
PEP Infomation	pep chromosome:B73_RefGen_v4:5:18304814:18308806:-1 gene:Zm00001d013716 transcript:Zm00001d013716_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable E3 ubiquitin-protein ligase ARI2
Sequence	MTSDDEEACDYFYDDDDDAEEDAAAGLEEDSSLPTPEGRADYWKQDLSTVMNLLNINQHQ ARALLIHHRWSMDGIYDSLDMGRERMLRNSGIVLQEVNSIAAAGSMTPWRTVTCKVCFED FSMDAVSTMDCGHCFCNDCWTEYFHAAVESGKKQIRCMEVKCSAFCDEDLVRFLLVQKYP DMAKNFNRFLLGSYLEDNASVKWCPSTPNCGHAIRVGTDERCCEVECPCGLSFCFNCMGH AHSPCPCTIWEKWNASRSEGENIKWILANTKSCPKCFKAIEKNGGCNLVRCKCGQCMCWL CGGGTGQDHTWNSITGHSCNRYEEEICVETVHTGRQQMQRYKHYHDRFKIHGDSSYGVEK QKLGAAIEERVRLLESDRERPLAIRDGDWLTRAHRRLLVSRQVLSRSYVFAYYMFGGHEL RTRPAERANLGVARNLFEHQQEQLERHVEHLSRSLAESADLAGAPDAEIVKQKQTAITLT KTVERLCGEMYKCIQDELLTLLVEPMSIAAYRPDGPDRAKPAI

Transcript Sequence

Transcript ID	Zm00001d013716_T007
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:18304814:18308806:-1 gene:Zm00001d013716 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable E3 ubiquitin-protein ligase ARI2
Sequence	GCGTTCGAGTTCACGCTAAGCATCGTCATCGCCCCATCGGTCCGTCGTTAGTGCCCCTCG CTCCCTCGGAAAACCCTCTCCTCTCCCCTATCCTCTCGTCTCCCCCCACCCCGCCGCGAT CAACCGAGACCCACCGCCATGACGAGCGACGACGAGGAGGCGTGCGACTACTTCTACGAC GACGACGACGACGCCGAGGAAGACGCCGCCGCCGGACTGGAGGAGGACTCTTCGCTTCCA ACGCCGGAGGGCCGCGCGGACTACTGGAAACAAGATCTGTCTACGGTGATGAACTTGCTC AATATAAATCAACATCAAGCACGAGCCCTCCTCATTCACCACCGATGGAGTATGGATGGC ATCTATGATTCTCTAGACATGGGGCGAGAACGCATGCTCAGAAATTCAGGGATCGTGCTG CAGGAGGTCAACAGCATTGCAGCAGCTGGCTCAATGACACCATGGAGAACAGTGACCTGC AAAGTGTGTTTTGAGGACTTCTCCATGGATGCTGTTTCGACCATGGACTGTGGGCACTGC TTCTGCAATGACTGTTGGACGGAGTATTTCCACGCTGCGGTAGAGAGCGGGAAAAAGCAA ATTCGGTGCATGGAGGTCAAGTGCTCGGCTTTCTGCGATGAGGACCTCGTGCGGTTTCTC CTTGTCCAAAAGTATCCAGACATGGCCAAGAACTTCAATCGCTTCCTGCTTGGGTCCTAC CTTGAGGACAATGCCTCTGTGAAGTGGTGCCCTAGCACCCCGAACTGTGGCCATGCCATT CGCGTGGGCACTGATGAGCGCTGCTGTGAGGTGGAATGCCCCTGCGGCTTAAGCTTCTGC TTTAACTGCATGGGGCATGCGCACTCGCCTTGCCCGTGCACCATATGGGAGAAATGGAAT GCCAGCCGGTCCGAGGGAGAGAACATCAAGTGGATCCTCGCTAACACCAAGAGCTGCCCC AAATGCTTCAAGGCCATCGAGAAGAACGGCGGCTGCAACCTTGTCCGCTGCAAGTGCGGA CAGTGTATGTGTTGGCTCTGCGGCGGAGGTACCGGCCAAGATCACACGTGGAACAGCATT ACCGGCCACAGCTGCAACCGCTACGAGGAGGAGATCTGTGTAGAGACCGTGCACACCGGC AGGCAGCAGATGCAGCGGTACAAGCACTACCACGACCGGTTCAAGATCCACGGCGACTCG TCGTACGGCGTGGAGAAGCAGAAGCTTGGGGCGGCCATCGAGGAGCGGGTGCGGCTTCTT GAGTCGGACCGCGAGCGCCCGCTCGCCATCCGCGACGGCGACTGGCTGACCCGGGCGCAC CGGCGGCTGCTGGTTTCTCGGCAGGTGCTGTCGCGGTCGTACGTGTTCGCATACTACATG TTCGGCGGCCACGAGCTGCGGACGCGCCCGGCCGAGCGGGCGAACCTGGGCGTGGCGCGT AACCTGTTCGAGCACCAGCAGGAGCAGCTGGAGCGGCACGTAGAGCACCTGTCCAGGTCG CTCGCGGAGTCGGCCGACCTGGCGGGGGCTCCGGACGCGGAGATCGTGAAGCAGAAGCAG ACGGCGATCACGCTCACCAAGACCGTGGAGCGGCTGTGCGGGGAGATGTACAAGTGCATC CAGGACGAGCTGCTGACGCTGCTCGTGGAGCCCATGAGCATCGCGGCGTACAGGCCGGAC GGCCCCGACAGAGCGAAGCCCGCGATCTGATGGGGTGGGGCCGTGGGGGGCTGTCTTTTT TACTCGCTGCCACATTTTGCCATTAGGGCTAGGCGTAGGATTTTGATCGCCTTGGTTTGA TAAAAAGCTGCCTGTCAGGCAGCAACCAACACGCCATATACAGCGTGAACGTGCCGTGAA ATGATTTTAGGCTGTTAGCACACAAGGGTTAGGTACTGACTGAAAGTTAAAAAAAGGCTG GACATGTTTATTTTT