Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d013703_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:5:18047108:18052512:1 gene:Zm00001d013703 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein kinase Nek1
Sequence	ATGGATCAGTACGAGGTGCTGGAGCAGATCGGCAAAGGAGCATTTGGCTCTGCCCTGCTG GTCAGGCACAAGCTGGAGAGGAAGAAGTATGTGTTGAAAAAGATCCGTCTTGCGCGTCAG ACAGACCGCACTCGCCGGTCCGCCCACCAAGAGATGCAGCTCATTGCTAATGTGAGGAAT CCATTCATTGTGGAGCACAAGGATTCATGGGTGGATAAGGGTTGCTACGTCTGCATTGTT ATAGGGTACTGCGAGGGAGGAGACATGGCTGAAGCTATTAAAAGGGCTAATGATACCCAC TTTTCTGAGGAGAAGCTTTGCCAGTGGCTAGTGCAGCTTCTCATGGCCCTTGACTATTTG CATGCACATCACATTCTTCACCGTGATGTGAAGTGCTCGAATATATTTCTCACTAGGGAC CAAAACATAAGACTCGGTGACTTTGGTCTCGCAAAAATATTGACCGCCGATGATTTGGCA TTCTCGATTGTAGGAACACCAAGTTACATGTGCCCAGAACTCCTCGCCGATATACCTTAT GGTACCAAATCTGACATTTGGTCACTAGGATGCTGCATGTATGAAATGGCTGCGCTCAAA CCTGCTTTTAGAGCTTTTGATATGCAAAACCTTATCAACAAGATTACCAAGTCGATAGTA TCACCTTTGCCAACAAGATATTCTGGTGCATTTCGAAGACTTGTTAGGAGCATGCTACGG AGAAGTCCAGAGCATAGGCCAAGTGCAGCCGAACTACTTAAGCATCCACATCTGCAGCCG TACGTCCTGCAACTCCATCTGAAGTCACACCTTTCTCGCAGCATAGTTCCTGTTCACCAG TCTCCAAGCGAGAAGAGGATGACATTCGCCGCAGAGCCCGTTTGCAGAAGCAAGGGCAGG AGGAACTCTTTAGGCAGCGAAAGGATGATAGCAGCCTTTAGCAAACCTTCTCCTGATAGA AGTTCTGTCAGCTCTATTCGGAGTGTCAAGGACGACTACACCGCCACACAGAGTGTCAGA GAGCTATCGGTTGATGAAAGCATGGTCGAGGTTGCTAGTAAACCCGTGGCATCAAGGACC TCAGATGTCATGAGGACTCCGAAGGCGACTCCGTGGAAGATGATGACGACTCTGAGGAAT CGGCTAGAAGCTCCACAAGCATCATATGACAGAACGAGTCATACAGAGTTTTCAAGAACA CCGGTTGACAAGAGGAACAGCCGCGTGGCCCGCAGAGCATCGCTTCCTCTGCCCGTATTT GAGACCCCGAAGCAGCGCAGCAGCATGAGCGTCCTGGAGCGGCTGGAGTCCCCCGACGTC TCCGTGAACTCGCCTCGCATCGACAGAATCGCCGAGTTTCCGCTAGCTTCGTGCGAGGAC CCCTTGTTCTCGACCGTGAAGCCACCGACACCCGCCAGCGCCAGCGCCAGCGCCACGCCT CCGTTCGTGGACCGGTCCATCACCAAGGACAAGTGCACGGCCCAGACGCTCCGGTCCGCG GCCCACGACGGTGGCAACGGCAGAAGCGAGGACGGCGGCGGTTTGTCCTCGGGTCGCACC ACCACCACGGCAGCGTCAAGCGGTGGGACGTCGGGGTCGTTGCAGCCGAAGGGGCGGTTC GACACGACGTCGTACCAGCAGCGCGCGGAGGCGCTGGAGGGCCTGCTGGAGTTCAGCGCG CAGCTGCTGCAGCAGGAGCGGTACGAGGAGCTCGGGGTCCTGCTGAGGCCGTTCGGCCCC GACGAGATGGTGTCCCCCAGGGAGACGGCCATCTGGCTCACCAAGAGCTTCAAGGAGGCG ATGGCCACGGGCTTGTAG

Peptide Sequence

PEP ID	Zm00001d013703_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:5:18047108:18052512:1 gene:Zm00001d013703 transcript:Zm00001d013703_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein kinase Nek1
Sequence	MDQYEVLEQIGKGAFGSALLVRHKLERKKYVLKKIRLARQTDRTRRSAHQEMQLIANVRN PFIVEHKDSWVDKGCYVCIVIGYCEGGDMAEAIKRANDTHFSEEKLCQWLVQLLMALDYL HAHHILHRDVKCSNIFLTRDQNIRLGDFGLAKILTADDLAFSIVGTPSYMCPELLADIPY GTKSDIWSLGCCMYEMAALKPAFRAFDMQNLINKITKSIVSPLPTRYSGAFRRLVRSMLR RSPEHRPSAAELLKHPHLQPYVLQLHLKSHLSRSIVPVHQSPSEKRMTFAAEPVCRSKGR RNSLGSERMIAAFSKPSPDRSSVSSIRSVKDDYTATQSVRELSVDESMVEVASKPVASRT SDVMRTPKATPWKMMTTLRNRLEAPQASYDRTSHTEFSRTPVDKRNSRVARRASLPLPVF ETPKQRSSMSVLERLESPDVSVNSPRIDRIAEFPLASCEDPLFSTVKPPTPASASASATP PFVDRSITKDKCTAQTLRSAAHDGGNGRSEDGGGLSSGRTTTTAASSGGTSGSLQPKGRF DTTSYQQRAEALEGLLEFSAQLLQQERYEELGVLLRPFGPDEMVSPRETAIWLTKSFKEA MATGL

Transcript Sequence

Transcript ID	Zm00001d013703_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:18047108:18052512:1 gene:Zm00001d013703 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein kinase Nek1
Sequence	GCCCGCATCCTCTTCTCCTTCCCTGTCGCTTTTTCTGTCTACAGCTTCCATGGCGCTCTC TCTCTCTGAATGAATACTCCTCCATCTTGCCTTCACCTTTTTCCTCCTTTTTATATCAAT ATATAAAATGTTGAGGTTCCAGGGCAACCAGCGGGTTTGAAGTTTGAACTCAGTCCCTCC CCCCGCAAGCTTTCTCTCTCTCTCTCTCTCTCTCTGATCAAATGTGGCGAGATCTGTGTG AGTAAGCGTGAATACCACTACGGTTTTTCGTCCTCCCCTTCCCTTCTTGAGCTACTTGAG CTACTCTGGTCACTTCTTGGAGCCGGCAACTGCCAGTTGGGGGTTTTTTAGGACAAAGGG AGCAAAAAAAAACGAACACCTTCCTGAGCTTAAGACAGCATGGATCAGTACGAGGTGCTG GAGCAGATCGGCAAAGGAGCATTTGGCTCTGCCCTGCTGGTCAGGCACAAGCTGGAGAGG AAGAAGTATGTGTTGAAAAAGATCCGTCTTGCGCGTCAGACAGACCGCACTCGCCGGTCC GCCCACCAAGAGATGCAGCTCATTGCTAATGTGAGGAATCCATTCATTGTGGAGCACAAG GATTCATGGGTGGATAAGGGTTGCTACGTCTGCATTGTTATAGGGTACTGCGAGGGAGGA GACATGGCTGAAGCTATTAAAAGGGCTAATGATACCCACTTTTCTGAGGAGAAGCTTTGC CAGTGGCTAGTGCAGCTTCTCATGGCCCTTGACTATTTGCATGCACATCACATTCTTCAC CGTGATGTGAAGTGCTCGAATATATTTCTCACTAGGGACCAAAACATAAGACTCGGTGAC TTTGGTCTCGCAAAAATATTGACCGCCGATGATTTGGCATTCTCGATTGTAGGAACACCA AGTTACATGTGCCCAGAACTCCTCGCCGATATACCTTATGGTACCAAATCTGACATTTGG TCACTAGGATGCTGCATGTATGAAATGGCTGCGCTCAAACCTGCTTTTAGAGCTTTTGAT ATGCAAAACCTTATCAACAAGATTACCAAGTCGATAGTATCACCTTTGCCAACAAGATAT TCTGGTGCATTTCGAAGACTTGTTAGGAGCATGCTACGGAGAAGTCCAGAGCATAGGCCA AGTGCAGCCGAACTACTTAAGCATCCACATCTGCAGCCGTACGTCCTGCAACTCCATCTG AAGTCACACCTTTCTCGCAGCATAGTTCCTGTTCACCAGTCTCCAAGCGAGAAGAGGATG ACATTCGCCGCAGAGCCCGTTTGCAGAAGCAAGGGCAGGAGGAACTCTTTAGGCAGCGAA AGGATGATAGCAGCCTTTAGCAAACCTTCTCCTGATAGAAGTTCTGTCAGCTCTATTCGG AGTGTCAAGGACGACTACACCGCCACACAGAGTGTCAGAGAGCTATCGGTTGATGAAAGC ATGGTCGAGGTTGCTAGTAAACCCGTGGCATCAAGGACCTCAGATGTCATGAGGACTCCG AAGGCGACTCCGTGGAAGATGATGACGACTCTGAGGAATCGGCTAGAAGCTCCACAAGCA TCATATGACAGAACGAGTCATACAGAGTTTTCAAGAACACCGGTTGACAAGAGGAACAGC CGCGTGGCCCGCAGAGCATCGCTTCCTCTGCCCGTATTTGAGACCCCGAAGCAGCGCAGC AGCATGAGCGTCCTGGAGCGGCTGGAGTCCCCCGACGTCTCCGTGAACTCGCCTCGCATC GACAGAATCGCCGAGTTTCCGCTAGCTTCGTGCGAGGACCCCTTGTTCTCGACCGTGAAG CCACCGACACCCGCCAGCGCCAGCGCCAGCGCCACGCCTCCGTTCGTGGACCGGTCCATC ACCAAGGACAAGTGCACGGCCCAGACGCTCCGGTCCGCGGCCCACGACGGTGGCAACGGC AGAAGCGAGGACGGCGGCGGTTTGTCCTCGGGTCGCACCACCACCACGGCAGCGTCAAGC GGTGGGACGTCGGGGTCGTTGCAGCCGAAGGGGCGGTTCGACACGACGTCGTACCAGCAG CGCGCGGAGGCGCTGGAGGGCCTGCTGGAGTTCAGCGCGCAGCTGCTGCAGCAGGAGCGG TACGAGGAGCTCGGGGTCCTGCTGAGGCCGTTCGGCCCCGACGAGATGGTGTCCCCCAGG GAGACGGCCATCTGGCTCACCAAGAGCTTCAAGGAGGCGATGGCCACGGGCTTGTAGCGG TGGCCTCCTTTCACCGGCATGGACGGATCAGGAATTCAGGATCGCCCATCAGCCTTGCAG GCTGTAGACGGCCGGATGGCATCGCCGGTGCTGGCGTGTGTAGGTCAGGTAGGTAGGCTA TGAGAATTGAGAAGAGAGAGGCGTTAGCGTTGACGGATCAGTTGTTAGTTGCTGGGAGTG GACACAACACCATCTCAGTGTTGGCCCCCCGGTTTATTTTGTTACTATGCTAGCAGTTCT TAGTTAGTTAATGGCGCTCTGGCTAGCTAGCTAGTGATGTACCAATGCAACCCCCCCCCC CCCCCCCCCCCCCCCCCAGCAGAATTAGTAGCATCAGGGAGTAGCAGTAGAGGTAGAGCT GGAGGAGTCTTGAGCTAGGAAGGAGAAGGGGATTAGTGAGATATAATTCCTATACTGTGA TGTAGCCCAAGTATGTACCAGTAGCTTCATATGCATCAGTGCTGACTGCTGAAGAACATT CAGACATCTATGGATTCAGCCATTCAGGCCGATTG