Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d013652_T012
CDS Infomation	cds chromosome:B73_RefGen_v4:5:16251493:16256476:1 gene:Zm00001d013652 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cationic amino acid transporter 4 vacuolar
Sequence	ATGGTGAACCTATATGTTCTGTCAGGGGTTGGTTCCACAGTTGGAGCAGGAGTATATGTT CTTGTTGGAACAGTTGCTAGGGAGCACGCTGGTCCAGCATTGACAATTTCATTTCTGATA GCTGGAATAGCAGCCGCGCTTTCAGCTTTCTGTTATGCTGAGCTTGCTAGTCGTTGCCCC TCAGCTGGAAGTGCTTACCATTATTCATACATCTGTGTTGGAGAAGGTGTTGCCTGGTTG ATTGGCTGGGCTCTAGTGCTGGAATATACTATTGGTGGGTCTGCTGTTGCCCGTGGTATA TCTCCAAATTTAGCCTTGTTTTTTGGAGGACAGGATAGTGTGCCATGGATTTTAGCACGC CATCAGCTTCCATGGTTTGATATCATTGTTGATCCCTGTGCAGCCGCTCTTGTTTTTGTT GTCACTGTTTTACTATGCGTGGGAATTAAAGAGAGTTCATTTGCACAAGGAGTCGTAACA GTTCTCAATGCCTGTGTAATGATATTTGTTATTGTAGCTGGGAGTTATATTGGCTTCCAA ATAGGATGGGTGGGCTACAAGGTTTCTGACGGGTATTTCCCACATGGAGTAAATGGAATG CTTGCTGGATCAGCAACTGTCTTCTTTGCATACATAGGCTTTGATACAGTCGCTAGTACA GCTGAAGAGGTAAAGAATCCACAGAGAGATTTGCCATTGGGAATTGGAGTTGCATTGGCT ATTTGTTGTGCGTTGTATATGGCTGTTTCTGTTGTTATTGTTGGGCTGGTGCCATATTTT GCCATGGATCCAGATACTCCTATTTCATCTGCCTTTGCAAGGCATGGAATGCAATGGGCT ATGTACGTTGTGACAAGTGGTGCTGTTCTTGCACTCTGCTCGACCTTGATGGGCTCACTT CTTCCACAGCCTAGAATACTTATGGCCATGGCACGAGATGGTCTGTTGCCATCCTTCTTC TCTGATGTTAACAAGCAAACTCAAGTACCTGTTAAGAGCACAATTGTGACTGGCATCTGT GCAGCTGCTCTGGCTTTTGCAATGGATGTTTCACAGTTAGCAGGAATGGTCAGTGTAGGC ACACTCCTTGCATTCACCATAGTTGCTGTCTCGATCTTGATACTCAGATATGTCCCTCCA GATGAGGTCCCTTTGCCGCCTTCTATGCAAGAATCATTTTGTTTGAACCAGGAATGTGAT GAGGAAAGGGATAGGGGTCTTCTTGGAGTTGGGAACTGTAACTTATCTCAGACAAAGGAT GTGATTGTGGTAGTAGAATCAGTGAAGGATCCTCTCATTGATAAAAGACTGCATAAAGGC AAGATGGATGAGACGAAGCGCCGAAAGATAGCCTCTTTAAGCATAGGGTCTGTGTGTGTA GGGGTTCTGATCCTTGCTTCTTCAGCCTCTGCCACATGGTTGCCTTTTCTCCCGATATGT ATTGGCTGCACCATTGGAGTTGTGCTCCTTCTGGCTGGCCTCAGCTTGCTCTCCTGGATC GACCAAGATGCTGGCAGGCACTCTTTTGGTCATTCCGGAGGATTCACATGCCCTTTTGTT CCAGTGCTACCAGTTTTGTGTATCCTGATAAATACGTATCTGTTAATAAACCTGAGTGGT GACACATGGATGAGAGTTGGCATATGGCTGCTGCTGGGTGTTCTTGTGTACGCTTTCTAC GGCCGAACCCACAGCTCCCTAATAGATGTTGTCTACGTTCCGGCAGCGCAAGCTGATGAG ATATACAGGAGTTCATCAGGATATGTATCATAG

Peptide Sequence

PEP ID	Zm00001d013652_P012
PEP Infomation	pep chromosome:B73_RefGen_v4:5:16251493:16256476:1 gene:Zm00001d013652 transcript:Zm00001d013652_T012 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cationic amino acid transporter 4 vacuolar
Sequence	MVNLYVLSGVGSTVGAGVYVLVGTVAREHAGPALTISFLIAGIAAALSAFCYAELASRCP SAGSAYHYSYICVGEGVAWLIGWALVLEYTIGGSAVARGISPNLALFFGGQDSVPWILAR HQLPWFDIIVDPCAAALVFVVTVLLCVGIKESSFAQGVVTVLNACVMIFVIVAGSYIGFQ IGWVGYKVSDGYFPHGVNGMLAGSATVFFAYIGFDTVASTAEEVKNPQRDLPLGIGVALA ICCALYMAVSVVIVGLVPYFAMDPDTPISSAFARHGMQWAMYVVTSGAVLALCSTLMGSL LPQPRILMAMARDGLLPSFFSDVNKQTQVPVKSTIVTGICAAALAFAMDVSQLAGMVSVG TLLAFTIVAVSILILRYVPPDEVPLPPSMQESFCLNQECDEERDRGLLGVGNCNLSQTKD VIVVVESVKDPLIDKRLHKGKMDETKRRKIASLSIGSVCVGVLILASSASATWLPFLPIC IGCTIGVVLLLAGLSLLSWIDQDAGRHSFGHSGGFTCPFVPVLPVLCILINTYLLINLSG DTWMRVGIWLLLGVLVYAFYGRTHSSLIDVVYVPAAQADEIYRSSSGYVS

Transcript Sequence

Transcript ID	Zm00001d013652_T012
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:16251493:16256476:1 gene:Zm00001d013652 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cationic amino acid transporter 4 vacuolar
Sequence	GAGCTCTTGCCGTCCCTATCCACCCCTCTCGGCTCTCGCCCTCCTCTCTGTCTTTCGCTC CGTCCAGCCGCCGCGTAAAATCCGCGGAACCAGATGCCCTTATCCGCCCTCTGATCGAAT CCGGCCAGAAAGGCCGGTTCTTTGTCGTCGTCCTCGGCATCGCCGGCGACCTTGATGGCA CTGGAGGCGGGTAGCAGCGGCGGCGGCGGGAGGGGATGGGGTGGCAGGTTCCGAAGCCTG ATGCGGCGGAAGCAGGTGGACTCCGATCGGGTCCGCGCCGAGGGCCAGCCGCAGCTCGCC AAGGAGCTCAACGTGCCGGAGCTGGTCGCGATCGGTGCGGTTTCTTCTTCCTTTGAATGG AACCCGACTGCCGACGCGCTCGCCAGACGCCAGGTCGCCTGCACACGCGGCACACCCGCA CAAACACCTAGAACGTCGGTCCGCGATACACACGCCCGAACGCACAACGATAGGTTTTAG TTCGTTGGGCCAACACTCCCAAACCATCAATCTATAAATCATACTTGCTCGCCCACAAAT CACAATGTGAGACTATTCTCAACAATCTTTCCTATGCTTGCTCAACCATATAAATCATGG TTGTTCACCCACAACTCATAATGGGTTTTAGGTCTATTGGGAATAGTCCACTCCTTTGAA AAGATAAATTACTCTACTAAGTTTGTGCAAAGATAAATTATCAAAATTCTACCAATGTAC AGTGATATAGGTTACTTCAATGCTTCTTGTTCTTCAAAGTGAAAACTTCGATGGGCTGAA TCAGATTCTATAGTAATAGAGTTTTCCAATCATTTCACTTCATGGTGAACCTATATGTTC TGTCAGGGGTTGGTTCCACAGTTGGAGCAGGAGTATATGTTCTTGTTGGAACAGTTGCTA GGGAGCACGCTGGTCCAGCATTGACAATTTCATTTCTGATAGCTGGAATAGCAGCCGCGC TTTCAGCTTTCTGTTATGCTGAGCTTGCTAGTCGTTGCCCCTCAGCTGGAAGTGCTTACC ATTATTCATACATCTGTGTTGGAGAAGGTGTTGCCTGGTTGATTGGCTGGGCTCTAGTGC TGGAATATACTATTGGTGGGTCTGCTGTTGCCCGTGGTATATCTCCAAATTTAGCCTTGT TTTTTGGAGGACAGGATAGTGTGCCATGGATTTTAGCACGCCATCAGCTTCCATGGTTTG ATATCATTGTTGATCCCTGTGCAGCCGCTCTTGTTTTTGTTGTCACTGTTTTACTATGCG TGGGAATTAAAGAGAGTTCATTTGCACAAGGAGTCGTAACAGTTCTCAATGCCTGTGTAA TGATATTTGTTATTGTAGCTGGGAGTTATATTGGCTTCCAAATAGGATGGGTGGGCTACA AGGTTTCTGACGGGTATTTCCCACATGGAGTAAATGGAATGCTTGCTGGATCAGCAACTG TCTTCTTTGCATACATAGGCTTTGATACAGTCGCTAGTACAGCTGAAGAGGTAAAGAATC CACAGAGAGATTTGCCATTGGGAATTGGAGTTGCATTGGCTATTTGTTGTGCGTTGTATA TGGCTGTTTCTGTTGTTATTGTTGGGCTGGTGCCATATTTTGCCATGGATCCAGATACTC CTATTTCATCTGCCTTTGCAAGGCATGGAATGCAATGGGCTATGTACGTTGTGACAAGTG GTGCTGTTCTTGCACTCTGCTCGACCTTGATGGGCTCACTTCTTCCACAGCCTAGAATAC TTATGGCCATGGCACGAGATGGTCTGTTGCCATCCTTCTTCTCTGATGTTAACAAGCAAA CTCAAGTACCTGTTAAGAGCACAATTGTGACTGGCATCTGTGCAGCTGCTCTGGCTTTTG CAATGGATGTTTCACAGTTAGCAGGAATGGTCAGTGTAGGCACACTCCTTGCATTCACCA TAGTTGCTGTCTCGATCTTGATACTCAGATATGTCCCTCCAGATGAGGTCCCTTTGCCGC CTTCTATGCAAGAATCATTTTGTTTGAACCAGGAATGTGATGAGGAAAGGGATAGGGGTC TTCTTGGAGTTGGGAACTGTAACTTATCTCAGACAAAGGATGTGATTGTGGTAGTAGAAT CAGTGAAGGATCCTCTCATTGATAAAAGACTGCATAAAGGCAAGATGGATGAGACGAAGC GCCGAAAGATAGCCTCTTTAAGCATAGGGTCTGTGTGTGTAGGGGTTCTGATCCTTGCTT CTTCAGCCTCTGCCACATGGTTGCCTTTTCTCCCGATATGTATTGGCTGCACCATTGGAG TTGTGCTCCTTCTGGCTGGCCTCAGCTTGCTCTCCTGGATCGACCAAGATGCTGGCAGGC ACTCTTTTGGTCATTCCGGAGGATTCACATGCCCTTTTGTTCCAGTGCTACCAGTTTTGT GTATCCTGATAAATACGTATCTGTTAATAAACCTGAGTGGTGACACATGGATGAGAGTTG GCATATGGCTGCTGCTGGGTGTTCTTGTGTACGCTTTCTACGGCCGAACCCACAGCTCCC TAATAGATGTTGTCTACGTTCCGGCAGCGCAAGCTGATGAGATATACAGGAGTTCATCAG GATATGTATCATAGAAAAGAACAGCTGCAGTCATGTGACACGATAGAGCCACAGAAAGAC CGAGCGGATGACAGTTACTCAAAAGGTGGTTGTCCATCAGCTGTAGAAAATTGGTTATCA GCCGGGGAAGACGGAACTGACTGTTATTTCTTTCATGCTCGGCTAGCATGATCTCGTGGA TGCAACTTTGCAAGATATGTATGCTGCTCACGAGCCAGGTCAATTTATACATTGTTGGAG TGTGTAGATATGGTGTATATAAAACCAACTGGGTGGAGTATGTGATGTCATACATAATAA TTTGTCTAATTCATGTAAAAGCCCTTTGTGCAGTTGT