Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d013607_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:5:15270327:15277879:1 gene:Zm00001d013607 gene_biotype:protein_coding transcript_biotype:protein_coding description:Threonine--tRNA ligase mitochondrial 1
Sequence	ATGTTTGCTGAGAATGAATTCAAGGTTGAAATCATTAATGAGTTGCCTGAGGACAAGACC ATTACTGTATACAGGTGTGGTCCTTTAGTTGACCTATGCCGTGGGCCACACATCCCAAAT ACTTCCTTTGTCAAAGCTTTCGCTTGTCTGAAGGCTTCATCATCATATTGGAGAGGAAAA GTTGACCGCGAAAGCCTGCAGAGAGTATATGGAATTTCTTTCCCTGATTCTCGACGTCTC ACGGAATATAAACATTTTCTAGAGGAAGCTAAGAAACGTGATCATAGGATATTAGGGAAA GCACAGGAACTCTTCTTTTTCCATGAACTTAGCCCTGGAAGCTGCTTCTTCCTTCCACAT GGTGCTAGGATATATAACAAACTGATGGACTTCATGCGACAACAGTACAGAGATAGAGGA TACCAAGAGGTGTTGAGCCCAAATATTTACAATATGCAACTATGGGAAACTTCTGGACAC GCCGCAAACTATAAGGAGAACATGTTTGTTTTTGAGATCGAGAAACAGGAATTTGGACTT AAGCCAATGAATTGTCCAGGACACTGTCTAATGTTTGCTAATAGGGTTCGGTCGTACAGA GAGTTGCCTCTTCGCATGGCTGATTTTGGAGTGCTTCATAGAAATGAGCTTAGTGGTGCT CTTACAGGTTTGACACGTGTTAGAAGATTCCAGCAGGATGATGCTCATATCTTCTGCAGA GAAGACCAAATCAAGGATGAAGTTAAGGCTGTTTTGGAATTCATCAATTATGTTTATGAG ATATTTGGCTTCAAATATGAGTTGGAGTTGTCTACGAGACCAGAGAAGTATCTAGGTGAA GTTGAAACTTGGAACAAAGCTGAGCAACAATTGACAGAAGCTTTAAATGAGTTTGGGAAG CCATGGAAGATTAATGAAGGGGATGGTGCTTTCTACGGCCCAAAAATTGATATTGGTGTG TTTGATGCCCTTAAGAGGAAATTTCAGTGTGCAACCCTACAGCTGGATTTTCAGCTGCCC ATTCGGTTCAAGCTGGCTTATTCTGCTGAGGATGAAGCCAAAATTGAAAGGCCTGTGATG ATACACAGGGCAATCCTAGGTTCGGTTGAAAGGATGCTTGCCATTCTTTTGGAGCATTAC AATGGTAAATGGCCCTTATGGCTAAGCCCTCGCCAGGCCATTGTTTGCTCGGTATCTTCT GGTTCAGTGGAATATGCGAAACAGGTTCTTGCCACTCTACATGAAGCTGGTTTTCATGTT GATATTGACGCGAGTGACAGGACAATACAAAAGAAGGTACGGGAAGCTCAACTGGCCCAA TTCAACTACATTCTTGTCGTAGGTGCACAAGAGGCCGAGACTGGAAATATATGCGTTAGG GTAAGAGACAATGCTGACCTGGTCACAACGAGTGTAGATGGCTTCATCACACGTTTGAGG GAGGAAATCGCAGCCTTCAAATGA

Peptide Sequence

PEP ID	Zm00001d013607_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:5:15270327:15277879:1 gene:Zm00001d013607 transcript:Zm00001d013607_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Threonine--tRNA ligase mitochondrial 1
Sequence	MFAENEFKVEIINELPEDKTITVYRCGPLVDLCRGPHIPNTSFVKAFACLKASSSYWRGK VDRESLQRVYGISFPDSRRLTEYKHFLEEAKKRDHRILGKAQELFFFHELSPGSCFFLPH GARIYNKLMDFMRQQYRDRGYQEVLSPNIYNMQLWETSGHAANYKENMFVFEIEKQEFGL KPMNCPGHCLMFANRVRSYRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCR EDQIKDEVKAVLEFINYVYEIFGFKYELELSTRPEKYLGEVETWNKAEQQLTEALNEFGK PWKINEGDGAFYGPKIDIGVFDALKRKFQCATLQLDFQLPIRFKLAYSAEDEAKIERPVM IHRAILGSVERMLAILLEHYNGKWPLWLSPRQAIVCSVSSGSVEYAKQVLATLHEAGFHV DIDASDRTIQKKVREAQLAQFNYILVVGAQEAETGNICVRVRDNADLVTTSVDGFITRLR EEIAAFK

Transcript Sequence

Transcript ID	Zm00001d013607_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:15270327:15277879:1 gene:Zm00001d013607 gene_biotype:protein_coding transcript_biotype:protein_coding description:Threonine--tRNA ligase mitochondrial 1
Sequence	AGGGTTTCTACTATGATGCTTACTACAATGATCAGACATTGAATGAGGAGCACTTTGGTA TCATTGAAAACCAAGCTAAAAAGGCTGTTGCGGAAAAGCAACCGTTTGAACGCATTGAGG TCAGCAGGGCAGAAGCTCTTGAAATGTTTGCTGAGAATGAATTCAAGGTTGAAATCATTA ATGAGTTGCCTGAGGACAAGACCATTACTGTATACAGGTGTGGTCCTTTAGTTGACCTAT GCCGTGGGCCACACATCCCAAATACTTCCTTTGTCAAAGCTTTCGCTTGTCTGAAGGCTT CATCATCATATTGGAGAGGAAAAGTTGACCGCGAAAGCCTGCAGAGAGTATATGGAATTT CTTTCCCTGATTCTCGACGTCTCACGGAATATAAACATTTTCTAGAGGAAGCTAAGAAAC GTGATCATAGGATATTAGGGAAAGCACAGGAACTCTTCTTTTTCCATGAACTTAGCCCTG GAAGCTGCTTCTTCCTTCCACATGGTGCTAGGATATATAACAAACTGATGGACTTCATGC GACAACAGTACAGAGATAGAGGATACCAAGAGGTGTTGAGCCCAAATATTTACAATATGC AACTATGGGAAACTTCTGGACACGCCGCAAACTATAAGGAGAACATGTTTGTTTTTGAGA TCGAGAAACAGGAATTTGGACTTAAGCCAATGAATTGTCCAGGACACTGTCTAATGTTTG CTAATAGGGTTCGGTCGTACAGAGAGTTGCCTCTTCGCATGGCTGATTTTGGAGTGCTTC ATAGAAATGAGCTTAGTGGTGCTCTTACAGGTTTGACACGTGTTAGAAGATTCCAGCAGG ATGATGCTCATATCTTCTGCAGAGAAGACCAAATCAAGGATGAAGTTAAGGCTGTTTTGG AATTCATCAATTATGTTTATGAGATATTTGGCTTCAAATATGAGTTGGAGTTGTCTACGA GACCAGAGAAGTATCTAGGTGAAGTTGAAACTTGGAACAAAGCTGAGCAACAATTGACAG AAGCTTTAAATGAGTTTGGGAAGCCATGGAAGATTAATGAAGGGGATGGTGCTTTCTACG GCCCAAAAATTGATATTGGTGTGTTTGATGCCCTTAAGAGGAAATTTCAGTGTGCAACCC TACAGCTGGATTTTCAGCTGCCCATTCGGTTCAAGCTGGCTTATTCTGCTGAGGATGAAG CCAAAATTGAAAGGCCTGTGATGATACACAGGGCAATCCTAGGTTCGGTTGAAAGGATGC TTGCCATTCTTTTGGAGCATTACAATGGTAAATGGCCCTTATGGCTAAGCCCTCGCCAGG CCATTGTTTGCTCGGTATCTTCTGGTTCAGTGGAATATGCGAAACAGGTTCTTGCCACTC TACATGAAGCTGGTTTTCATGTTGATATTGACGCGAGTGACAGGACAATACAAAAGAAGG TACGGGAAGCTCAACTGGCCCAATTCAACTACATTCTTGTCGTAGGTGCACAAGAGGCCG AGACTGGAAATATATGCGTTAGGGTAAGAGACAATGCTGACCTGGTCACAACGAGTGTAG ATGGCTTCATCACACGTTTGAGGGAGGAAATCGCAGCCTTCAAATGATTTTGATGCTGCA TAATTTCCTACTACTCGTTTGTGATTTTGACGAGTTTTTAGTGACCAGCATCGAGTTCCT CGTGTTACTGTTCTTGTTTGTATGAAGCTAAAAGGTTGTCTTTTTGTTATTAATTACAGA TGCGAAGTTA