Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d013544_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:5:13969149:13975546:1 gene:Zm00001d013544 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform
Sequence	ATGTTCAACAAGATAATCAAGAGGGGAAACCGCAAGGGCGCGCGCGGGGACAGTGCGGAG GTCGCCGCGCGCCCCGCAGCGCCCTCGTCATCCTCCGGGAGCGGCGGCGGCGGCGCGGGG GGAGCCGCGCCCGTCACCGTCAACCACGCCTCCCGGGCCACAGCGCCTTCTCCGTCGTCG CCCACTTCTCCGCACGTCACGCCGTCCGCGTTTGCGACCAACCCGGCGGTGGGGGCGGCG TCACCGCCACTCCTCGAGCCTCTCCCGCTCCTCCGCGACGTCGCCGCCGCAGACCGTCCG GGCCTCATCCTCCGCAAGCTCCGCCTCGTCGCGGCGCTCTTCGACCTCTCGGACTCGCTC AAGCACCCGCGAGAGAAGGAGGCCAAACGCCAGGCGCTCCTCGAGCTCGTAGATTACGTG CAGGCTCCAGCTCAGGCCGCGGGCGCCAACGCGCCCACGCGCCTCCCGGACCACGTCCAG GAGGCGCTAGTCCTTGCCATCTCTGCCAACATCTTCCGCCCGCTGCCACCCGCGCTGCAC GAGTCCGCCGCCGCGATCGACCCCGGCGCCGCGCCCGACGACGACGAGGAGCCATACCTG GACCCCTCCTGGCCACACCTCCAGCTCGTCTATGAGCTCCTTCTCCGATACGTTGTTTCG CCTGACACGGACACCAAGGTCGCCAAGCGGTATGTGGACCATGCTTTCGTCCTCCGCATC CTCGACCTCTTTGACTCCGAGGATCCGCGTGAGCGGGAATACCTCAAGACCGTGCTCCAC CGCATCTATGGCAAGTTCATGGTACACCGACCATTCATCCGTAAGGCCATCAACAATGTG TTCTACCGGTTCATCTTTGAGACTCAGCGCTACAATGGCATAGGGGAGCTCCTTGAGATC CTTGGAAGCATCATTAATGGATTTGCCTTGCCAATGAAGGAGGAGCACAAGCTATTCCTT GCCCGTGCTCTCATCCCCCTGCACAAGCCCAAATCTGTTGTGATCTACCATCAGCAGCTA TCCTATTGTATTGTTGAGTTCGTTGAGAAGGACTACAAATTAGCAGATACTGTGATTAGG GGTCTGCTCAAGTACTGGCCAGTCACAAATTGCCAGAAGGAGGTGTTGTTTCTGGGGGAG CTTGAAGAAGTGCTCGAGGCAACACAGCCTGCAGAGTTCCAACGGTGCATGGTGCCACTG TTTAAGCAGATTGCCCGATGCCTTAACAGTTCTCACTTCCAGGTTGCTGAACGCGCTTTG TTCTTGTGGAACAATGATCACATTGTAAGCTTGATAGCGCAAAATCGTGGTGTTATATTT CCAATTATATTTGAAGCGCTCGAGAGGAATATACATAGCCACTGGAATCAAGCAGTTCAT GGTCTCACTGCAAATGTGCGCAAGATGTTTCTGGACATGGACAGTGAACTATTTGAAGAG TGCCAGCAGCAGTATATGGATAAACAAGCAAAAGCCAAAGAGATGCAGGAGCAACGAGAA TCAGCATGGAGACAATTGGAAGCTGTTGTTGCTGCCAAGGCTGCTGGGGATGACATGGTT TTGGTCAACTAG

Peptide Sequence

PEP ID	Zm00001d013544_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:5:13969149:13975546:1 gene:Zm00001d013544 transcript:Zm00001d013544_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform
Sequence	MFNKIIKRGNRKGARGDSAEVAARPAAPSSSSGSGGGGAGGAAPVTVNHASRATAPSPSS PTSPHVTPSAFATNPAVGAASPPLLEPLPLLRDVAAADRPGLILRKLRLVAALFDLSDSL KHPREKEAKRQALLELVDYVQAPAQAAGANAPTRLPDHVQEALVLAISANIFRPLPPALH ESAAAIDPGAAPDDDEEPYLDPSWPHLQLVYELLLRYVVSPDTDTKVAKRYVDHAFVLRI LDLFDSEDPREREYLKTVLHRIYGKFMVHRPFIRKAINNVFYRFIFETQRYNGIGELLEI LGSIINGFALPMKEEHKLFLARALIPLHKPKSVVIYHQQLSYCIVEFVEKDYKLADTVIR GLLKYWPVTNCQKEVLFLGELEEVLEATQPAEFQRCMVPLFKQIARCLNSSHFQVAERAL FLWNNDHIVSLIAQNRGVIFPIIFEALERNIHSHWNQAVHGLTANVRKMFLDMDSELFEE CQQQYMDKQAKAKEMQEQRESAWRQLEAVVAAKAAGDDMVLVN

Transcript Sequence

Transcript ID	Zm00001d013544_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:13969149:13975546:1 gene:Zm00001d013544 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform
Sequence	CCCATTGATCCCCTTCCCCCCTCCACTCGTCTCCCAAATCGCCAGCGAGCGCCATGCCGC CGCCTCCCCTGCCCTCGCCGCCCCTGACCGGCTGACCCGACCTCCCCACTGTCTTTCCCT TCCACCTGGGCGCCACAGCGTTTCCCTTCCCGTCACCACGAAATCCCGGAGGGACGAGGA GGGAGTTCGTCGCCTGATCGATCGGCCGATCCACGCCGCCGGCCTCCCAATCCTTCGCTG CCGCCATGTTCAACAAGATAATCAAGAGGGGAAACCGCAAGGGCGCGCGCGGGGACAGTG CGGAGGTCGCCGCGCGCCCCGCAGCGCCCTCGTCATCCTCCGGGAGCGGCGGCGGCGGCG CGGGGGGAGCCGCGCCCGTCACCGTCAACCACGCCTCCCGGGCCACAGCGCCTTCTCCGT CGTCGCCCACTTCTCCGCACGTCACGCCGTCCGCGTTTGCGACCAACCCGGCGGTGGGGG CGGCGTCACCGCCACTCCTCGAGCCTCTCCCGCTCCTCCGCGACGTCGCCGCCGCAGACC GTCCGGGCCTCATCCTCCGCAAGCTCCGCCTCGTCGCGGCGCTCTTCGACCTCTCGGACT CGCTCAAGCACCCGCGAGAGAAGGAGGCCAAACGCCAGGCGCTCCTCGAGCTCGTAGATT ACGTGCAGGCTCCAGCTCAGGCCGCGGGCGCCAACGCGCCCACGCGCCTCCCGGACCACG TCCAGGAGGCGCTAGTCCTTGCCATCTCTGCCAACATCTTCCGCCCGCTGCCACCCGCGC TGCACGAGTCCGCCGCCGCGATCGACCCCGGCGCCGCGCCCGACGACGACGAGGAGCCAT ACCTGGACCCCTCCTGGCCACACCTCCAGCTCGTCTATGAGCTCCTTCTCCGATACGTTG TTTCGCCTGACACGGACACCAAGGTCGCCAAGCGGTATGTGGACCATGCTTTCGTCCTCC GCATCCTCGACCTCTTTGACTCCGAGGATCCGCGTGAGCGGGAATACCTCAAGACCGTGC TCCACCGCATCTATGGCAAGTTCATGGTACACCGACCATTCATCCGTAAGGCCATCAACA ATGTGTTCTACCGGTTCATCTTTGAGACTCAGCGCTACAATGGCATAGGGGAGCTCCTTG AGATCCTTGGAAGCATCATTAATGGATTTGCCTTGCCAATGAAGGAGGAGCACAAGCTAT TCCTTGCCCGTGCTCTCATCCCCCTGCACAAGCCCAAATCTGTTGTGATCTACCATCAGC AGCTATCCTATTGTATTGTTGAGTTCGTTGAGAAGGACTACAAATTAGCAGATACTGTGA TTAGGGGTCTGCTCAAGTACTGGCCAGTCACAAATTGCCAGAAGGAGGTGTTGTTTCTGG GGGAGCTTGAAGAAGTGCTCGAGGCAACACAGCCTGCAGAGTTCCAACGGTGCATGGTGC CACTGTTTAAGCAGATTGCCCGATGCCTTAACAGTTCTCACTTCCAGGTTGCTGAACGCG CTTTGTTCTTGTGGAACAATGATCACATTGTAAGCTTGATAGCGCAAAATCGTGGTGTTA TATTTCCAATTATATTTGAAGCGCTCGAGAGGAATATACATAGCCACTGGAATCAAGCAG TTCATGGTCTCACTGCAAATGTGCGCAAGATGTTTCTGGACATGGACAGTGAACTATTTG AAGAGTGCCAGCAGCAGTATATGGATAAACAAGCAAAAGCCAAAGAGATGCAGGAGCAAC GAGAATCAGCATGGAGACAATTGGAAGCTGTTGTTGCTGCCAAGGCTGCTGGGGATGACA TGGTTTTGGTCAACTAGATCCATGTTCCTTGCATCAGTGAAAAACATGTGGGCCGAGTTT GAACACATTGGTGGCCGCGACAGCCAATCCACGCAGAATTTCTGTGTCTAGTGAGGTCCT GCTATGGTTCTGAGCCGTTCCTTTATTCAGCCCCTCCTCTTCTGTTGCGTTAATTTATGA ACAATTGGACTCTTGTATTAATCCTTCATTGTTTGCCCTAGTTTCGTACCCACAATTGGG AAAATTCAAGTAGTGAAAATGACTCAGCTAGATTGTAAGGTTTCTTTTATTTGTATTTAC TTCTTTTCTCCTTGGGAGTTATTTCAGTTCATGTTGTTGTATGGAGGTAACAGTACAAAT GGCAGATAAAAGCCTTTTTAACCTAGTGTCCGGCATGGT