Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d013536_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:5:13856319:13859702:1 gene:Zm00001d013536 gene_biotype:protein_coding transcript_biotype:protein_coding description:HPP

Sequence

ATGGCTTCGCTGCAGAGCCAGAGCCTGCTCGGCATTGGCAGCAGCAGCATCGTCTTGGCA
CGAGCGAGGGTGCAGCAGTGTCTGGCAGCGGCGTCTCGCTCACACGCGCCCCTCCTGCAG
GCCAATGGAGGCAGGACGGGCCTCCCCTCCTCCTCGATCCTTAACGCTGGCAATGCGATC
AGCTTCAGCCGGCGGAGAAGGAAGGACCTGCGCGTCGTCGCGGAGGCGGCCGCGGCGGGG
CCGACCAAGGTCACGCCGGCCTCGTCTGGCGGCGTCAGCATCAGCGACGTGCTCTGGCCT
TCCGCCGGAGCATTCTTGGCCATGGCGGTACTTGGGAAAATGGACCAGGTGGTGGCGTTC
AAGGGAGTATCCTTGACGATTCCGCCCCTGGGAGCAGTCTGCTGCGTGCTTTTCAGCGCT
CCAGACTCGCCTGCAGCCAAGAAATATAATATGTTCGTCGCCCAGATCGGTTGTGCGGCT
TTGGGCGTATTAGCCCTCTCGTTGTTTGGGCCTGGCTGGTTAGCAAGAGGTGCAGCCCTT
TCAGCCTGTATAGCATTCATGACCATCACGGGTGCCTCACATCCTCCAGCTGCAAGCTTG
CCCCTCCTATTTATCGATGGCCCGAAGTTTCACAGTTTGCAACTTTGGTACGCGCTTTTC
CCTGGAGCTGTAGGTTGCATCGTCCTTTGCTTGATTCAAGAGGTGGTGGTTTACCTGAAG
AAGAACATCAAATTTTGA

Peptide Sequence

PEP ID

Zm00001d013536_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:5:13856319:13859702:1 gene:Zm00001d013536 transcript:Zm00001d013536_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:HPP

Sequence

MASLQSQSLLGIGSSSIVLARARVQQCLAAASRSHAPLLQANGGRTGLPSSSILNAGNAI
SFSRRRRKDLRVVAEAAAAGPTKVTPASSGGVSISDVLWPSAGAFLAMAVLGKMDQVVAF
KGVSLTIPPLGAVCCVLFSAPDSPAAKKYNMFVAQIGCAALGVLALSLFGPGWLARGAAL
SACIAFMTITGASHPPAASLPLLFIDGPKFHSLQLWYALFPGAVGCIVLCLIQEVVVYLK
KNIKF

Transcript Sequence

Transcript ID

Zm00001d013536_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:13856319:13859702:1 gene:Zm00001d013536 gene_biotype:protein_coding transcript_biotype:protein_coding description:HPP

Sequence

AGAACAGCTGCGACTCTCCAGTCTCCACGCCACCGAACTCCGAAGAGGCCACCTCCCCTC
ATGGCCTCATCACATCACAGCGCCTCCTCACCTTGTCTGTCCTCTTCCTCTCGCCCCTTA
TCTTACTCGTTTACGTTTCTTCTCGTGGGGAGAGAGAAACAGCAGGGCTAGATTAGATAC
CACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGGGAGGGTGGAGAGGATGGCTT
CGCTGCAGAGCCAGAGCCTGCTCGGCATTGGCAGCAGCAGCATCGTCTTGGCACGAGCGA
GGGTGCAGCAGTGTCTGGCAGCGGCGTCTCGCTCACACGCGCCCCTCCTGCAGGCCAATG
GAGGCAGGACGGGCCTCCCCTCCTCCTCGATCCTTAACGCTGGCAATGCGATCAGCTTCA
GCCGGCGGAGAAGGAAGGACCTGCGCGTCGTCGCGGAGGCGGCCGCGGCGGGGCCGACCA
AGGTCACGCCGGCCTCGTCTGGCGGCGTCAGCATCAGCGACGTGCTCTGGCCTTCCGCCG
GAGCATTCTTGGCCATGGCGGTACTTGGGAAAATGGACCAGGTGGTGGCGTTCAAGGGAG
TATCCTTGACGATTCCGCCCCTGGGAGCAGTCTGCTGCGTGCTTTTCAGCGCTCCAGACT
CGCCTGCAGCCAAGAAATATAATATGTTCGTCGCCCAGATCGGTTGTGCGGCTTTGGGCG
TATTAGCCCTCTCGTTGTTTGGGCCTGGCTGGTTAGCAAGAGGTGCAGCCCTTTCAGCCT
GTATAGCATTCATGACCATCACGGGTGCCTCACATCCTCCAGCTGCAAGCTTGCCCCTCC
TATTTATCGATGGCCCGAAGTTTCACAGTTTGCAACTTTGGTACGCGCTTTTCCCTGGAG
CTGTAGGTTGCATCGTCCTTTGCTTGATTCAAGAGGTGGTGGTTTACCTGAAGAAGAACA
TCAAATTTTGACTCAAGTATCTTGACTCTATGGATTCTTGTGGCAATGATTCTATTAATT
ATTCAATCATGTACCATAAATTACATTGCCAACATTTGCCAAGCATGTTCGGTTGTCCTG
CAGCTGTAATCCATAGAGATAAAATATTGTAAAATACACAACCACAGTCGGATTAAAGTC
GCAGCAAGCCGTAGCGAACATGGGGAAAGTTGTGAAAATGAAGGCCTCCTATCTCTTGTA
TTAGTTAAAGAAGAAAGAGGACTTTCCTTGATACCTTGTGCTCGTCAAAATGCAGAGGAC
ACAAATGTGTATATACCATTATCTCTGTCACTGTGGACGCATTAACCCTTAGTGATGTTT
TGGTAATTAATGACAAATATTTGTGGACTAACAA