Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d013532_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:13749820:13753258:-1 gene:Zm00001d013532 gene_biotype:protein_coding transcript_biotype:protein_coding description:Defense-related protein

Sequence

ATGGGAATGGGGCCGCTCGACAACGCCGCGTCGGCCGCGCTGGAGGCCGCCGCCGCCGCC
GCCGCCGCCCCCTCGCGGGCGGGCTCGTACGCGGTGCTGCAGTGCGGCGAGGACTCGGAG
TACGTGCGGCAGAAGTACGGCGGCTACTTCGCCGTCTTCCGCGCGCTGCTGGAGGAGGAC
GGCGAGAGGTGGCGGGTGTACAGCGCCGTCCGCGGGGAGCTCCCCGCCGACGCCGAGGCA
GCCGGGTTCGACGGGTTCGTCATCTCCGGGAGCTGCGCCGACGCGCACGGCGACGAGCCC
TGGATCCTCGCGCTCGTCGACCTCACCCGCCGCGTCCACGCCGCCGGCAAGCGCGTCCTC
GGCGTCTGCTTCGGCCACCAGATCCTGTGCCGGGCGCTGGGCGGGCGCACGGGGCGGTCG
GCCAAGGGCTGGGACATCGGGGTGAGCTGCATCCACCCGACGGCGGCGGCGGCGCGGCTG
TTCGCGCCGCTGAAGCTGCCCGTGCACATGCCGGTGATCGAGTTCCACCAGGACGAGGTG
TGGGAGCTGCCCCCCGGCGCCGAGGCGCTGGCGCGGTCCGACAAGACCCGCGTCGAGATG
TTCCGCCTCGGCGGCCGCGCCATGGGCGTCCAGGGCCACCCGGAGTACAGCAAGGACGTC
CTCATGAGCATCGCCGACCGCCTCCTCCGCCACAACCACATACTGGACTGCCAGGTGGAA
GTGGCCAAGACGAGCTTCGACGTGCGGCAGCCGGACAAGGAGCTGTGGAGCAAGGACTGC
CAGGTGGAAGTGGCCAAGACGAGCTTCGACGTGCGGCAGCCGGACAAGGAGCTGTGGAGC
AAGGTGTGCAGGGGCTTCCTCAAGGGAAGGCTCCAGTCGTCGCAGCAGCAAGGTGTGGCG
CTATAG

Peptide Sequence

PEP ID

Zm00001d013532_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:13749820:13753258:-1 gene:Zm00001d013532 transcript:Zm00001d013532_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Defense-related protein

Sequence

MGMGPLDNAASAALEAAAAAAAAPSRAGSYAVLQCGEDSEYVRQKYGGYFAVFRALLEED
GERWRVYSAVRGELPADAEAAGFDGFVISGSCADAHGDEPWILALVDLTRRVHAAGKRVL
GVCFGHQILCRALGGRTGRSAKGWDIGVSCIHPTAAAARLFAPLKLPVHMPVIEFHQDEV
WELPPGAEALARSDKTRVEMFRLGGRAMGVQGHPEYSKDVLMSIADRLLRHNHILDCQVE
VAKTSFDVRQPDKELWSKDCQVEVAKTSFDVRQPDKELWSKVCRGFLKGRLQSSQQQGVA
L

Transcript Sequence

Transcript ID

Zm00001d013532_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:13749820:13753258:-1 gene:Zm00001d013532 gene_biotype:protein_coding transcript_biotype:protein_coding description:Defense-related protein

Sequence

TCTCCCCCCATCCTCCCCGCCACCTCTCACCCCCCGCAAGCGAGTCAGCCAAGCCAAGCG
ACGCCCAACCCCCGCCTCCATTCCCGGGCCGGAGACGCGCCTGCCTGGCCGCGACGCCGC
CAGCCATGGGAATGGGGCCGCTCGACAACGCCGCGTCGGCCGCGCTGGAGGCCGCCGCCG
CCGCCGCCGCCGCCCCCTCGCGGGCGGGCTCGTACGCGGTGCTGCAGTGCGGCGAGGACT
CGGAGTACGTGCGGCAGAAGTACGGCGGCTACTTCGCCGTCTTCCGCGCGCTGCTGGAGG
AGGACGGCGAGAGGTGGCGGGTGTACAGCGCCGTCCGCGGGGAGCTCCCCGCCGACGCCG
AGGCAGCCGGGTTCGACGGGTTCGTCATCTCCGGGAGCTGCGCCGACGCGCACGGCGACG
AGCCCTGGATCCTCGCGCTCGTCGACCTCACCCGCCGCGTCCACGCCGCCGGCAAGCGCG
TCCTCGGCGTCTGCTTCGGCCACCAGATCCTGTGCCGGGCGCTGGGCGGGCGCACGGGGC
GGTCGGCCAAGGGCTGGGACATCGGGGTGAGCTGCATCCACCCGACGGCGGCGGCGGCGC
GGCTGTTCGCGCCGCTGAAGCTGCCCGTGCACATGCCGGTGATCGAGTTCCACCAGGACG
AGGTGTGGGAGCTGCCCCCCGGCGCCGAGGCGCTGGCGCGGTCCGACAAGACCCGCGTCG
AGATGTTCCGCCTCGGCGGCCGCGCCATGGGCGTCCAGGGCCACCCGGAGTACAGCAAGG
ACGTCCTCATGAGCATCGCCGACCGCCTCCTCCGCCACAACCACATACTGGACTGCCAGG
TGGAAGTGGCCAAGACGAGCTTCGACGTGCGGCAGCCGGACAAGGAGCTGTGGAGCAAGG
ACTGCCAGGTGGAAGTGGCCAAGACGAGCTTCGACGTGCGGCAGCCGGACAAGGAGCTGT
GGAGCAAGGTGTGCAGGGGCTTCCTCAAGGGAAGGCTCCAGTCGTCGCAGCAGCAAGGTG
TGGCGCTATAGCAGGAGGAAATTGGGGGGGCATTGGATGCCTAGGTTAATCCGTCATATT
GTTTGTTTTTTATATATCAAGAGTTGTACAGAAACTGCTATCGTCGTCCGAAGCATTAAT
AAAAAAAAGGAGGGAAAAAATAGTTCGTTGGTTTGGTTCCATCTTTCCGTGGCACCAGTT
CATTCTCGTAGTGCCTTTGCATCCACTTCTTTTCTTTGTAACACACGTTGCATATGCTGC
TTGCATCTTCGGCTCA