Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d013468_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:5:12327612:12329627:-1 gene:Zm00001d013468 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein FAF-like chloroplastic
Sequence	ATGCTTGCAATTGCAACAAAGCTTGTGTTGTGCAACAACAGCAGCTCAGAGACACTAGCT CCAGAGTCAGGACTAACTACTAGCCAAAGCCAAGATCACACAACTTCCATTCCAAGACCA AGAGCGCTTCCAAATTGCGGGCTTCTCCTCGCGGTGCAACAGTGTGTATGCTCTGCCTGC TATTCTGATCTTAGTCACAGGGGGCAAGCGCGACTGCCACTTCACACCTTCCTCAAGGCG GCGAAGATGTCGGTGGCCGTGTACCGTGGCCCAGCTGCTGTTCCGGCGTTCGAGGCGCCC TGCTGGCTGCGCCCTGCTGAGCCGTACAAGCAGCCGGAGGCCGTCGTCGACGACCGGCCT GCGCAGGTGGACATATGGAACGCCATCCAGGCCGACGTGGACAGGGCGTCCGCCGGCGCT AAGAAGGCGTCGAAGCCGTACGTGCACCGGTCGCGGAGCCTGATGAGCCAGAAGAGCCTC GAGGTCTGCACAGAGAGCCTGGGCAACGAGACCGGCTCTGGCGACTTCACGTCGTCCCTG GACATGGCCTTCCTGTTCGACTCGCCGCTGCCGGCGGGTGCTGCCGCAGAGGAGGAGTCC TTCTGGCAGCACGACGGGTCTCGCCGCTGCGAGGAGGAGCAGTGGGAAAGCGAGGACCTC GCGGCGGTGAACTACCACTGCTCGGCCGGGACGCGGCCGCTGAACCGCCGCTCGTTCCCG CCGCCGCTGCCGTCCATGTCGCGCCGCGACGGGCCGTGCCTGCAGATGCGCCCACGCCGC CAGGACGGGCGCCTCGTGGTCGAGGCCGTGGCGGTGAGGCCGCGCGGCTACCTCCACGCG AAGCGCCAGGGCGGGCGCCTCCGCCTCTCCTTCGTCGAGTGCTCTGCTCGCGCCCAGAGC GCGGCGAGCAGGATCACCGCGGCGGCAGCTGAGGCGCCGTATTTCCCCGCCGTGGAGCCC AAGAACGCGCAAGAGGAAGAGGCGGCCGTGGAAGTGGTGGACGACGACGACGAGGAGGTG ATGGAGGAGGAGGAGGAGGAGGTGGAGGTGCTGGACAGGGGCACCGTCGTTGAGGTCAAG GTGAGCACGCAGCCGCAGGCGCCCACCGCGGGCAAGGTGCACCGCTCGAGGCTCGTGATC AACAAGTTCGTCGGCAGCACGCCGCTGTCCGTGGACCAGCCCCGGTGCGATGACGGCGCG AGACAGCCCGAGGCGAACACCCGCGACGACGAGACGACGGCGGCGGCACAGCCGTCACGC CCGACCATGCGACGGGTGCCGTCGTCTACGACGACGCTGGCGGCCGCGGTCGCCGCAGCC TCGACAGAGGACGACGACGAGTGCGGCGGGCTGCACCTTCCCGCCCCGGCCGCGGCCGAG ACCAAACAGCTTCTGCTGCTGTCGTTCACGTCGCGGAGGGGGGACAAGCAGGACCTGCTG CAGAGCGTGCGGCGGTGCCGGCAGCTGCGGCAGAAGAAGCTCTTCATCCTGGAGCCCTAC TGCATTGCCACCTCCTGA

Peptide Sequence

PEP ID	Zm00001d013468_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:5:12327612:12329627:-1 gene:Zm00001d013468 transcript:Zm00001d013468_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein FAF-like chloroplastic
Sequence	MLAIATKLVLCNNSSSETLAPESGLTTSQSQDHTTSIPRPRALPNCGLLLAVQQCVCSAC YSDLSHRGQARLPLHTFLKAAKMSVAVYRGPAAVPAFEAPCWLRPAEPYKQPEAVVDDRP AQVDIWNAIQADVDRASAGAKKASKPYVHRSRSLMSQKSLEVCTESLGNETGSGDFTSSL DMAFLFDSPLPAGAAAEEESFWQHDGSRRCEEEQWESEDLAAVNYHCSAGTRPLNRRSFP PPLPSMSRRDGPCLQMRPRRQDGRLVVEAVAVRPRGYLHAKRQGGRLRLSFVECSARAQS AASRITAAAAEAPYFPAVEPKNAQEEEAAVEVVDDDDEEVMEEEEEEVEVLDRGTVVEVK VSTQPQAPTAGKVHRSRLVINKFVGSTPLSVDQPRCDDGARQPEANTRDDETTAAAQPSR PTMRRVPSSTTTLAAAVAAASTEDDDECGGLHLPAPAAAETKQLLLLSFTSRRGDKQDLL QSVRRCRQLRQKKLFILEPYCIATS

Transcript Sequence

Transcript ID	Zm00001d013468_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:12327612:12329627:-1 gene:Zm00001d013468 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein FAF-like chloroplastic
Sequence	ATACATGCTTGCAATTGCAACAAAGCTTGTGTTGTGCAACAACAGCAGCTCAGAGACACT AGCTCCAGAGTCAGGACTAACTACTAGCCAAAGCCAAGATCACACAACTTCCATTCCAAG ACCAAGAGCGCTTCCAAATTGCGGGCTTCTCCTCGCGGTGCAACAGTGTGTATGCTCTGC CTGCTATTCTGATCTTAGTCACAGGGGGCAAGCGCGACTGCCACTTCACACCTTCCTCAA GGCGGCGAAGATGTCGGTGGCCGTGTACCGTGGCCCAGCTGCTGTTCCGGCGTTCGAGGC GCCCTGCTGGCTGCGCCCTGCTGAGCCGTACAAGCAGCCGGAGGCCGTCGTCGACGACCG GCCTGCGCAGGTGGACATATGGAACGCCATCCAGGCCGACGTGGACAGGGCGTCCGCCGG CGCTAAGAAGGCGTCGAAGCCGTACGTGCACCGGTCGCGGAGCCTGATGAGCCAGAAGAG CCTCGAGGTCTGCACAGAGAGCCTGGGCAACGAGACCGGCTCTGGCGACTTCACGTCGTC CCTGGACATGGCCTTCCTGTTCGACTCGCCGCTGCCGGCGGGTGCTGCCGCAGAGGAGGA GTCCTTCTGGCAGCACGACGGGTCTCGCCGCTGCGAGGAGGAGCAGTGGGAAAGCGAGGA CCTCGCGGCGGTGAACTACCACTGCTCGGCCGGGACGCGGCCGCTGAACCGCCGCTCGTT CCCGCCGCCGCTGCCGTCCATGTCGCGCCGCGACGGGCCGTGCCTGCAGATGCGCCCACG CCGCCAGGACGGGCGCCTCGTGGTCGAGGCCGTGGCGGTGAGGCCGCGCGGCTACCTCCA CGCGAAGCGCCAGGGCGGGCGCCTCCGCCTCTCCTTCGTCGAGTGCTCTGCTCGCGCCCA GAGCGCGGCGAGCAGGATCACCGCGGCGGCAGCTGAGGCGCCGTATTTCCCCGCCGTGGA GCCCAAGAACGCGCAAGAGGAAGAGGCGGCCGTGGAAGTGGTGGACGACGACGACGAGGA GGTGATGGAGGAGGAGGAGGAGGAGGTGGAGGTGCTGGACAGGGGCACCGTCGTTGAGGT CAAGGTGAGCACGCAGCCGCAGGCGCCCACCGCGGGCAAGGTGCACCGCTCGAGGCTCGT GATCAACAAGTTCGTCGGCAGCACGCCGCTGTCCGTGGACCAGCCCCGGTGCGATGACGG CGCGAGACAGCCCGAGGCGAACACCCGCGACGACGAGACGACGGCGGCGGCACAGCCGTC ACGCCCGACCATGCGACGGGTGCCGTCGTCTACGACGACGCTGGCGGCCGCGGTCGCCGC AGCCTCGACAGAGGACGACGACGAGTGCGGCGGGCTGCACCTTCCCGCCCCGGCCGCGGC CGAGACCAAACAGCTTCTGCTGCTGTCGTTCACGTCGCGGAGGGGGGACAAGCAGGACCT GCTGCAGAGCGTGCGGCGGTGCCGGCAGCTGCGGCAGAAGAAGCTCTTCATCCTGGAGCC CTACTGCATTGCCACCTCCTGAACAAAACCGTCCATCACTGCGCTGGCACACCACAGAGC TGCGAATGCGACAGTTCGGTCGCGTCGCCATTGCTAGCCTTAAATTAATCACTAGCAAAT CAAGCACGGTCCTGATTAGCCGATTATAAGAACCCCTGCCAGTCCCGTCTCCGTCGTCGT CACAGTGGCTTTCCCCATGTGTTGCTTGGTGTTTCGCCTTTTGACTGCGCGTGCATCGGC TAGCAGTCGCCGTTTGTTTGTTCCCTTCCCGCTGGCCTCGTGCGTGCTGTGATTGTTGTT GTTGTTGCTGCTGCTCAGGTAGTTTGTCCCCGGCATTTGCAGAGTGTGATTTGAGTAAGT AATTTATCAATGGATTAACAGATTCGCT