Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d013432_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:5:11290378:11293922:-1 gene:Zm00001d013432 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ran BP2/NZF zinc finger-like superfamily protein
Sequence

ATGCACCGCCGCCTTGCCACCGCGGCCACAGCGCCCGCGCTCCGGCGGTTCTCGCACCAC
AGCGCGCGTCCCCAGCCTGACCCAAGGTTCGCCTTCCTATGCTCCGAGGTCGACAACCTC
GACCTCTCCCCCTCTCATAAATCATCGCCACGGCCTCCCCATAGAGAGCAATTCCAGGTG
TTAGAAGAGCTAAGAAGCGACCTTGCTCTTGCTGGAGACGCTCCGGCGGGTGTGGCTATA
GCGCATCCGTGGCCGGAGTGGATTTCTCTGATGGAGCACCTCCTCCGTCAAGGCCACGTT
GACCCCTCCACCTTCGCCGCCGCCTCGCTGTCTTCTAAGGACGCCAACGCTGTCCGCACC
GCCTGCCTCCGATTCGGGCGCCAGCGGCCGGAGCTCATCAGGCATGTATCAAGATGGGAT
ATTCAGGTTGCCATGCGATGTGGTTGTCCCAGCATTGACAGAAAGGTTGTAAACTCTGGG
AAGCGATTGCGGGCTTATGTAGGACTTGATGAAGGAGAGGTTTGCAGCCAATGCAATTTA
AGAGGAAGTTGTGATAGGGCATATGTGAAGGCTCGGAAAGAGGACGTTGGAAGAACTGTG
GATGTTATGCGCATCCTTTTGACTTACGGTCTTGATGTTATTACCGGCAATGTAGATAAT
AGAGCATGCCTGAACAAATCTGTCAAGGAATCAATAAAGATCCTACTAAGCGAGGTTGTT
GAGGTGGATTCTAGGGGACCTGGTTCCAGCACTGTGAAAGCTGCACAGCGCAAAGGTCAA
TCTGCTGTACCCATGAAGCAGGGTGATTGGAATTGTCCCAAGTATGTTTGA

Peptide Sequence

PEP ID

Zm00001d013432_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:5:11290378:11293922:-1 gene:Zm00001d013432 transcript:Zm00001d013432_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ran BP2/NZF zinc finger-like superfamily protein
Sequence

MHRRLATAATAPALRRFSHHSARPQPDPRFAFLCSEVDNLDLSPSHKSSPRPPHREQFQV
LEELRSDLALAGDAPAGVAIAHPWPEWISLMEHLLRQGHVDPSTFAAASLSSKDANAVRT
ACLRFGRQRPELIRHVSRWDIQVAMRCGCPSIDRKVVNSGKRLRAYVGLDEGEVCSQCNL
RGSCDRAYVKARKEDVGRTVDVMRILLTYGLDVITGNVDNRACLNKSVKESIKILLSEVV
EVDSRGPGSSTVKAAQRKGQSAVPMKQGDWNCPKYV

Transcript Sequence

Transcript ID

Zm00001d013432_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:11290378:11293922:-1 gene:Zm00001d013432 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ran BP2/NZF zinc finger-like superfamily protein
Sequence

GAGTCCACCTGCCGGATGCACCGCCGCCTTGCCACCGCGGCCACAGCGCCCGCGCTCCGG
CGGTTCTCGCACCACAGCGCGCGTCCCCAGCCTGACCCAAGGTTCGCCTTCCTATGCTCC
GAGGTCGACAACCTCGACCTCTCCCCCTCTCATAAATCATCGCCACGGCCTCCCCATAGA
GAGCAATTCCAGGTGTTAGAAGAGCTAAGAAGCGACCTTGCTCTTGCTGGAGACGCTCCG
GCGGGTGTGGCTATAGCGCATCCGTGGCCGGAGTGGATTTCTCTGATGGAGCACCTCCTC
CGTCAAGGCCACGTTGACCCCTCCACCTTCGCCGCCGCCTCGCTGTCTTCTAAGGACGCC
AACGCTGTCCGCACCGCCTGCCTCCGATTCGGGCGCCAGCGGCCGGAGCTCATCAGGCAT
GTATCAAGATGGGATATTCAGGTTGCCATGCGATGTGGTTGTCCCAGCATTGACAGAAAG
GTTGTAAACTCTGGGAAGCGATTGCGGGCTTATGTAGGACTTGATGAAGGAGAGGTTTGC
AGCCAATGCAATTTAAGAGGAAGTTGTGATAGGGCATATGTGAAGGCTCGGAAAGAGGAC
GTTGGAAGAACTGTGGATGTTATGCGCATCCTTTTGACTTACGGTCTTGATGTTATTACC
GGCAATGTAGATAATAGAGCATGCCTGAACAAATCTGTCAAGGAATCAATAAAGATCCTA
CTAAGCGAGGTTGTTGAGGTGGATTCTAGGGGACCTGGTTCCAGCACTGTGAAAGCTGCA
CAGCGCAAAGGTCAATCTGCTGTACCCATGAAGCAGGGTGATTGGAATTGTCCCAAGTAT
GTTTGAAAAGTTAATATGTGTCTCTATCGCCTATCCCCCCTGGTCATAATGCCTTGCATT
CATTGTCAGATGTGACTTTCTGAACTTTGCAAAGAATATCAAATGTTTGCGCTGCGATGG
AGAATTCCAAGAGAGGTATCAGTTGTTGCATGAAGACCGAGAGCATCTGCCTCTCAAAAA
GGGTGACTGGATATGCAAAAGGTGCAACTTTTTGAATTTTGCTAAGAATACAAGATGCTT
GCAATGTCATGAGAAACCAACAAACCGTTTACTCAACCCAGGAGAATGGGAGTGTGTCTC
GTGAGTGCCTATTTCTACTACACTATTATATATCTCCTTATTTGTTGAACATGTTCATGA
AGGACAAGCCTGGCACAGTGGTGACAAGCCTTTTCACTGAGTCGGTTATTCCTTCCTCAG
ACCCCACTTGTGTGGAAGCCGCCAGCACTCGGTCTGTCCTTTTATTTGTTTGAACATTTG
AAGTGTTCTGATGCCTACTGCCAATACAAGTTACAAGCTTATAGTTGGAGATGATGTTAG
CGCTGTGTGGCTATCCTTTCACTGCTGTGATTTTATTTCTAATACATTTGAGAAAATGGA
AGATAACTATGTTCATGTGTTATGTTCAATTTCAGGTGTAACTATGTGAACTTCAAGAGG
AATGGGTTCTGCTTGAAATGTGGCTGGAAAAGACCAAAGTCTCTAAACAATCAAGATAGT
GTCAAATTGTGTCATGATTTAGAGCATAGTAAGAATCCACGTATTTCATTTGTTCAAGAT
GGTGTCCAGATGAAGGGGTGGCAAAGTCTGCAAAAGAAGGGTTCACCATCCGACACAGAT
TTGGATTTCTGGAGTGCAGACGACGAAGAGGGTGGTAGCAGGGATAATGATACGCTGCTG
CGACAGAAGGACTACAGATTTCTTGAGAGTTTTCCCATTGTCGGTGGCAGGACTGCTAAT
TCCCAAGATCTTCTTGCAAGGGAGAAGTGGAAGGATGAAATGTCCAGGAGAAATAAAGGC
CTTCAAACTACGGAATCGCAAGAAAGCAATCGGCCTTCTAGCCACTGCCGTCTTCCAAGA
AGCATGGAGCTGGTTGACTCTGATGATGATATTGCTTCTTGGTTTTCGGGTGGGGATAAT
AATAATAGGAACCTGGATAAGGTATAACCAGATCTTGTAAGTGGATGCAGCTCATCAATA
AAAGTTGCATCCTTTGGAATTATTGAAATTCAGGCAAAAAGAATTATT