Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d013427_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:5:11138124:11148193:-1 gene:Zm00001d013427 gene_biotype:protein_coding transcript_biotype:protein_coding description:Threonine dehydratase biosynthetic chloroplastic
Sequence	ATGGCGGCCGCCGCCACCACCGCTTCGCCCTCGGCCTCCTTCCCTGCGGCATCCCTCCGT CGCGACGCGCGCAGGACCTCATGCGTAGCCGCCGCCGCCGCGGCGACGACGGCCGCTGAG GCGGGGCTCGCGGCCGTCCCGGCGCCGCCGCCAACGCCGATGGTTCGGGTGGTGCCGGAG TCACTGCAGCGGGAAAGCGGGTGCCTCGTGGAGGGATTTAGGGCGCGCGGTGCGTGCGCG GCGGATGGGGAGGGGTTTGGGGACGCCGCGGGGGAAGGAGGAGGCCCCGGCGCGATGGAG TACCTGACCAGCGTGCTGTCATCCAAGGTGTACGACGTGGCAATCGAATCACCGCTGCAG CTCGCCTCCAAGCTCTCCCACCGCCTCGGGGTCAACATCTGGATCAAGCGCGAGGACCTG CAGCCGGTGTTCTCATTCAAATTGCGGGGAGCATACAACATGATGGCAAAGCTCTCCCGT GAGCAGTTAGAGAGGGGCGTCATCTGCTCCTCTGCTGGAAACCATGCCCAGGGCGTTGCT CTTTCTGCTCAGAGACTGGGTTGTGATGCTGTCATCGTCATGCCCGTGACGACACCAGAA ATCAAGTGGAAATCAGTGGAGCGGTTGGGAGCAACGGTGGTCCTTGAGGGGGACTCATAT GATGAAGCTCAGTCATACGCAAAATTACGATGTCAGCAAGAAGACCGCACATTCATACCT CCCTTTGACCATCCTGATGTCATCACTGGGCAAGGAACTGTCGGCATGGAAATTGTTCGG CAACTGCAAGGTCCACTGCATGCAATATTTGTACCTGTTGGAGGCGGTGGATTAATTGCT GGAATTGCTGCCTATGTAAAACGGGTTCGCCCAGAGGTGAAAATAATTGGAGTGGAACCC TCCGATGCAAATGCAATGGCATTATCCTTATATCATGGTAAGAGGGTCATGTTGGAGCAT GTTGGTGGGTTTGCTGATGGTGTTGCTGTCAAAGCTGTAGGGGAGGAAACATTTCGCCTG TGCAGAGAGCTTGTAGATGGCATTGTTATGGTCAGTCGAGACGCTATTTGTGCTTCGATA AAGGATATGTTTGAGGAGAAAAGAAGTATCCTTGAACCTGCCGGTGCCCTTGCATTGGCT GGGGCTGAAGCCTACTGCAAATACTATAACTTGAAAGGAGATACTGTGGTTGCAATAACT AGTGGGGCGAATATGAACTTTGACCGACTTAGACTTGTAACTGAGCTAGCAGATGTTGGC CGAAAACGGGAAGCAGTGTTAGCTACATTTCTGCCCGAGGAGCATGGAAGCTTCAAAAAA TTCACAGAATTGGTTGGCAGGATGAATATTACTGAATTTAAATACAGATATGATTTTAAT GCAAAGGATGCCCTTGTTCTTTACAGTGTTGGCATTTACACTGACAATGAGCTTGGAGCA ATGGTGGATCGCATGGAATTGGCGAAACTGAAGACTGTTAATCTAACTGATAATGATTTA GCAAAGGACCACCTTAGATACTTTATTGGAGGTAGATCAGAAATAAAAGATGAACTTGTT TACCGGTTCATTTTTCCAGAAAGGCCTGGTGCCCTTATGAAATTTTTGGATGCATTCAGC CCTCGTTGGAACATCAGTCTTTTTCATTACCGTGCACAGGGTGAAACTGGAGCAAATGTA TTAGTTGGTATACAAGTGCCGCCAGTGGACTTCGATGAATTCAAGAGTCATGCTGATAAT CTCGGTTTGGTGTCACTTTTGAAGTAA

Peptide Sequence

PEP ID	Zm00001d013427_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:5:11138124:11148193:-1 gene:Zm00001d013427 transcript:Zm00001d013427_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Threonine dehydratase biosynthetic chloroplastic
Sequence	MAAAATTASPSASFPAASLRRDARRTSCVAAAAAATTAAEAGLAAVPAPPPTPMVRVVPE SLQRESGCLVEGFRARGACAADGEGFGDAAGEGGGPGAMEYLTSVLSSKVYDVAIESPLQ LASKLSHRLGVNIWIKREDLQPVFSFKLRGAYNMMAKLSREQLERGVICSSAGNHAQGVA LSAQRLGCDAVIVMPVTTPEIKWKSVERLGATVVLEGDSYDEAQSYAKLRCQQEDRTFIP PFDHPDVITGQGTVGMEIVRQLQGPLHAIFVPVGGGGLIAGIAAYVKRVRPEVKIIGVEP SDANAMALSLYHGKRVMLEHVGGFADGVAVKAVGEETFRLCRELVDGIVMVSRDAICASI KDMFEEKRSILEPAGALALAGAEAYCKYYNLKGDTVVAITSGANMNFDRLRLVTELADVG RKREAVLATFLPEEHGSFKKFTELVGRMNITEFKYRYDFNAKDALVLYSVGIYTDNELGA MVDRMELAKLKTVNLTDNDLAKDHLRYFIGGRSEIKDELVYRFIFPERPGALMKFLDAFS PRWNISLFHYRAQGETGANVLVGIQVPPVDFDEFKSHADNLGLVSLLK

Transcript Sequence

Transcript ID	Zm00001d013427_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:11138124:11148193:-1 gene:Zm00001d013427 gene_biotype:protein_coding transcript_biotype:protein_coding description:Threonine dehydratase biosynthetic chloroplastic
Sequence	GTAAACAAATCAGAGGAATTTGACGAGGCCACCGTCACCACCATGGCGGCCGCCGCCACC ACCGCTTCGCCCTCGGCCTCCTTCCCTGCGGCATCCCTCCGTCGCGACGCGCGCAGGACC TCATGCGTAGCCGCCGCCGCCGCGGCGACGACGGCCGCTGAGGCGGGGCTCGCGGCCGTC CCGGCGCCGCCGCCAACGCCGATGGTTCGGGTGGTGCCGGAGTCACTGCAGCGGGAAAGC GGGTGCCTCGTGGAGGGATTTAGGGCGCGCGGTGCGTGCGCGGCGGATGGGGAGGGGTTT GGGGACGCCGCGGGGGAAGGAGGAGGCCCCGGCGCGATGGAGTACCTGACCAGCGTGCTG TCATCCAAGGTGTACGACGTGGCAATCGAATCACCGCTGCAGCTCGCCTCCAAGCTCTCC CACCGCCTCGGGGTCAACATCTGGATCAAGCGCGAGGACCTGCAGCCGGTGTTCTCATTC AAATTGCGGGGAGCATACAACATGATGGCAAAGCTCTCCCGTGAGCAGTTAGAGAGGGGC GTCATCTGCTCCTCTGCTGGAAACCATGCCCAGGGCGTTGCTCTTTCTGCTCAGAGACTG GGTTGTGATGCTGTCATCGTCATGCCCGTGACGACACCAGAAATCAAGTGGAAATCAGTG GAGCGGTTGGGAGCAACGGTGGTCCTTGAGGGGGACTCATATGATGAAGCTCAGTCATAC GCAAAATTACGATGTCAGCAAGAAGACCGCACATTCATACCTCCCTTTGACCATCCTGAT GTCATCACTGGGCAAGGAACTGTCGGCATGGAAATTGTTCGGCAACTGCAAGGTCCACTG CATGCAATATTTGTACCTGTTGGAGGCGGTGGATTAATTGCTGGAATTGCTGCCTATGTA AAACGGGTTCGCCCAGAGGTGAAAATAATTGGAGTGGAACCCTCCGATGCAAATGCAATG GCATTATCCTTATATCATGGTAAGAGGGTCATGTTGGAGCATGTTGGTGGGTTTGCTGAT GGTGTTGCTGTCAAAGCTGTAGGGGAGGAAACATTTCGCCTGTGCAGAGAGCTTGTAGAT GGCATTGTTATGGTCAGTCGAGACGCTATTTGTGCTTCGATAAAGGATATGTTTGAGGAG AAAAGAAGTATCCTTGAACCTGCCGGTGCCCTTGCATTGGCTGGGGCTGAAGCCTACTGC AAATACTATAACTTGAAAGGAGATACTGTGGTTGCAATAACTAGTGGGGCGAATATGAAC TTTGACCGACTTAGACTTGTAACTGAGCTAGCAGATGTTGGCCGAAAACGGGAAGCAGTG TTAGCTACATTTCTGCCCGAGGAGCATGGAAGCTTCAAAAAATTCACAGAATTGGTTGGC AGGATGAATATTACTGAATTTAAATACAGATATGATTTTAATGCAAAGGATGCCCTTGTT CTTTACAGTGTTGGCATTTACACTGACAATGAGCTTGGAGCAATGGTGGATCGCATGGAA TTGGCGAAACTGAAGACTGTTAATCTAACTGATAATGATTTAGCAAAGGACCACCTTAGA TACTTTATTGGAGGTAGATCAGAAATAAAAGATGAACTTGTTTACCGGTTCATTTTTCCA GAAAGGCCTGGTGCCCTTATGAAATTTTTGGATGCATTCAGCCCTCGTTGGAACATCAGT CTTTTTCATTACCGTGCACAGGGTGAAACTGGAGCAAATGTATTAGTTGGTATACAAGTG CCGCCAGTGGACTTCGATGAATTCAAGAGTCATGCTGATAATCTCGGTTTGGTGTCACTT TTGAAGTAAGGTTCCACTCCAAGGTAGAAGGTGCAAGTTTCTTCTTCAGTTGGAATGCAG TCATTGCCAAATATACCTTCAATGTGCCATCTCACCATCTGTTTACTCAGTTAGATTTTA GCGTATCAGTCGTGTATTTTTGTTGTTGTGCTTCGTGAACTCACTTATCCGTTTGCGGCA CCTAGAGTGTGTCAAATAATGATAACTAATATGATATCGAAATGTCTGATAATATATATG TATTTGTG