Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d013425_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:11126389:11127711:1 gene:Zm00001d013425 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tsr2248 protein
Sequence

ATGGTGCTCCAGCTCCACTGCGCCACACCGACCATCACCATCTCCCCGCCTCCCGCCCGC
CCTCGTCACTACCCCCACCACCTCTACGGCGCCAGCGGAGCGCTCCAGGCCCCAGCTCGC
GGCCTCGGGCACCTTCCCCGCCTCCTCGTCGGCGTCAGAGACCCGCGCGCCGACGGAGCG
GTCTGTCACGTGAGGAGGCAGGTGCGGTACGACGAGGACGACGAGGAGGATGACGACGGC
GAGGAGTGGGGCCACAACGAGGACGTCGCGAGGATGGAACGGTACAGCGAGGACGCCCGC
GACCAGGCGCTCCTGGTGAAGGCCCGAGTGGACGACGAGGTCGAAGTCGTGCTCGTCTTC
AGGGGCTTCTCGTCGAGCTTGAGCGGGGGAACGGCCGCGGATCCGGCGAGGAGCGTCCTG
CCGGAGAGGGCGATCATACAGTCGGTCGACGTGGTGAAGGGGCCGTTTGACCCCAACAAC
ATCGAGTACCTGGAGAAGGGAGTGGGATGGGAGGACTTCAGGAGCCGCCTGCGATAG

Peptide Sequence

PEP ID

Zm00001d013425_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:11126389:11127711:1 gene:Zm00001d013425 transcript:Zm00001d013425_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tsr2248 protein
Sequence

MVLQLHCATPTITISPPPARPRHYPHHLYGASGALQAPARGLGHLPRLLVGVRDPRADGA
VCHVRRQVRYDEDDEEDDDGEEWGHNEDVARMERYSEDARDQALLVKARVDDEVEVVLVF
RGFSSSLSGGTAADPARSVLPERAIIQSVDVVKGPFDPNNIEYLEKGVGWEDFRSRLR

Transcript Sequence

Transcript ID

Zm00001d013425_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:11126389:11127711:1 gene:Zm00001d013425 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tsr2248 protein
Sequence

GTCGCGTCCTCGTCCCTTGGCTGCCACACTGCAGAAACGACGACAGGTAGTGGCAGCACT
CAGACCGCGCCTTATCCAACTGACTGACACCTCGCTCGCTCTGTCGCTCAGCCCTCACCC
ACCCAGCATGGTGCTCCAGCTCCACTGCGCCACACCGACCATCACCATCTCCCCGCCTCC
CGCCCGCCCTCGTCACTACCCCCACCACCTCTACGGCGCCAGCGGAGCGCTCCAGGCCCC
AGCTCGCGGCCTCGGGCACCTTCCCCGCCTCCTCGTCGGCGTCAGAGACCCGCGCGCCGA
CGGAGCGGTCTGTCACGTGAGGAGGCAGGTGCGGTACGACGAGGACGACGAGGAGGATGA
CGACGGCGAGGAGTGGGGCCACAACGAGGACGTCGCGAGGATGGAACGGTACAGCGAGGA
CGCCCGCGACCAGGCGCTCCTGGTGAAGGCCCGAGTGGACGACGAGGTCGAAGTCGTGCT
CGTCTTCAGGGGCTTCTCGTCGAGCTTGAGCGGGGGAACGGCCGCGGATCCGGCGAGGAG
CGTCCTGCCGGAGAGGGCGATCATACAGTCGGTCGACGTGGTGAAGGGGCCGTTTGACCC
CAACAACATCGAGTACCTGGAGAAGGGAGTGGGATGGGAGGACTTCAGGAGCCGCCTGCG
ATAGTAACAGCACTAGCACATTGTGCTGTTGTTCTTTTAAGGCAATTTTATCTGCTTCCG
ACTGATCAGGCCATGCAATGGTCGTCCAAAACCAGAAATGTACAGTTGGTCATCCTATCC
CACAATTTCATTTTGTAGCATCTGACAGATTGTCCAGCCTGGCACCCCACCCAATAAAAG
TATGGAGGCCATCAAGGCAGTAAAATCAACAAAGAATACATATATACTCTTATATCAACT
GGAGACCAGAACATCCTCCCATAACACAATCGCGTGAATGGGCCAAGACGGCCAAATAAG
CATGTGTTCGGCAAAAGACTCGCGAAAATCACGTGCAAGGCCTCCAGGGTAAATTCAAAT
GTAAAAAAAGAATTGATCATTCTACTGCAATCCATACGTGTGCTGCTGCGGTTGTACATT
CTACGATCCACCAGTGGCTGTCACAAACCAATCATTTCCATGCGACAGAGTCGATCTCAT
TCCTTGCAGATTTGTACAGCTCTAGCCTCTTGACCAGGGCATCCCTCTTCTCCATCAAAG
CGGGGTCCTCGTCCAACATCGCACTCAG