Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d013412_T016
CDS Infomation

cds chromosome:B73_RefGen_v4:5:10600684:10608150:-1 gene:Zm00001d013412 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histidine kinase 4
Sequence

ATGTGCGAGGAGCGCGCGCGCATGCTGCAGGACCAGTTCGCCGTCTCCGTCAACCACGTC
CACGCCCTCGCCATCCTCGTCGCCACCTTCCACTACGAGAAGCACCCGCCCGCGCTCGAC
CAGAACACGTTCGCGGACTACACCGCCAGGACGTCGTTCGAGCGGCCGCTGCTGAGCGGG
GTGGCGTACGCGCAGCGGGTGGTGCACGCCGACAGGGAGGGCTTCGAGCGCCACCAGGGG
TGGATCATCAAGACCATGAAGCACGAGCCGTCCCCGGCGCAGGACGAGTACGCGCCCGTT
GTATACTCGCAGGAGACCGTCTCCTACATCGAGGGGCTCGACATGATGTCCGGCGAGGAG
GACCGTGAGAACATTCTGAGGTCAAGAGCATCGGGGAAGGCAGTTCTCACTCGACCATTC
CGGCTCATGTCGAATCACCTGGGTGTCGTATTGACTTTTCCTGTCTATCATGCGGATCTT
CCTTCTGATGCCAAGGAGGAGGATCGTGTTGCTGCCACCGCAGGATACCTTGGGGGAGCA
TTTGATGTAGAATCATTAGTGGAAAATTTGTTGAGGCAGCTAGCTGGCAATCAGGAATTG
GTGGTAAATGTTTATGATGTCACAAACATTTCGAACCCTCTTGTCATGTATGGATCAGAA
GTTCCTCTTGGCAACCCCTCACCATCGCACATCTGCATGCTAGATTTTGGTGATCCATTC
AGAAAGCATCATATGGTTTGCAGATACAGAAACAAGCCTCATGTCCCATGGTCTGCAATT
TCTACCCCATCTGGTGTCTTTGTCATATGTATGCTTGTGGGGTACATCGCGGGTGCCGCT
TGGAGTCGTTATGATAATGTTAAGGAAGATTGCCGGAAAATGGAGGAGCTGAAAAAACAG
GCGGAAGCAGCCGATGTTGCTAAATCTCAGTTCCTTGCAACTGTTTCTCATGAGATCAGA
ACGCCCATGAATGGAGTTCTAGGAATGCTTGATATGCTGTTAGACACTGACCTAACCTCA
ACTCAGAGGGATTTTGCACAAACCGCTCAAGTCTGTGGAAAGGCTTTAATATCGCTAATC
AATGAAGTGCTTGACAGAGCGAAAATTGAAGCCAGAAAGTTGGATCTTGAATCTGTACCA
TTTGATCTGAGATCCATCCTTGATGATGTCATCTCATTATTTTCTTCAAAGTCAAGAGAG
AAGGGAATTGAGCTTGATGTATATGTCTCTGAAAGAGTTCCCGAAATCTTGTTGGGTGAT
CCTGGAAGGTTTCGACAGATAATTACAAATTTAGTGGGCAACTCAATTAAGTTCACAGAA
CGGGGACATATTTTTGTACAAGTTCATCTGGCAGATCATTCAAATCTTGCAACAGAATCC
AAAGTTGAGCCGGTGGCTAATGGGATGAATGGACATACAGATGAGAAAACTGCTGTAGCA
ACCAGTGTTTCTCTCAACACACTAAGTGGTTTTGAAGCTGCTGATAGCCGAAATAGTTGG
GAAAACTTCAAGCTTTTGCTTTCTTATGAGAAAAATGAGATGCCCTATGAAAGTGTATCT
GATAAAGTTACTCTTGTAGTAAGTGTGGAAGATACAGGAATAGGTATACCATTGGATGCA
CAAGCCAAGGTGTTCACACCTTTCATGCAGGCTGATAGTTCGACTTCCAGGACATATGGT
GGTACTGGAATTGGATTGAGCATCAGCAAATGTCTTGTTGAACTAATGGGTGGTCAGATA
AACTTTGTCAGCCGACCACATGTTGGGAGTACGTTCACATTTACTGCGGTTCTCAAAAGA
TGTGACAGAAGCGCTATTGGTGACAGTAAGCCTGTTATGTTGCATCCTCTTCCATCCAGT
TTCAAAGGTTTATCTGCACTATTGGTTGATAGAAGACCAGTAAGAGCTACTGTAACTAAG
TATCACTTGCAAAGGCTGGGAATTGCCTGTGATGTTGTTGCAACCATTGAACTGGCTCTT
GGTGTGCTGTCCGGGAGAAATGGCAGTTCCCTAACCAGTATGAAGCAACCATGCATGTTA
TTGATCGAGAGTGATTCATGGGGCTTCAATATTGATGTTTCTTTACGATCTAGACTCCTG
GAGATGAAGCAGAATGGTCACACACATGTATTACCCAAAATCATCCTTCTTGCAGCTGCA
GAATCGGGCAAACTCAAAGAACACTATGCAGTTGATTCTGTGATCACGAAACCCCTGAAA
GCAAGCGCACTTGCCGCTTGTCTGTTCCAAACACTTGGCATCAAACAGTCAAGCAACGAG
AGAAGTGACAACTCAGGTTCTCTTTACGGGTTGCTTCTTGGCAAGAACATATTGGTGGTT
GATGACAACAAGGTAAATCTTAGAGTGGCTGCTGGCACGTTAAAGAAATTTGGAGCAAAG
GTGGAGTGCGTGGAGAGTGGAAAAGATGCCCTCGCCCTCCTACAGGTCCCATATAAGTTT
CATCTTTGTCTCATGGACATTCAGATGCCCGAAATGGATGGGTTTGAGGCTACCAAGCAA
ATAAGGGCAATGGAAGCGAAGGCAAATGAGCAGGCAGTCGCCTGTGACAATTCAGAAATA
GATGGTGCGACAAGGGCAGCAAGATGGCGCCTGCCTGTTCTTGCAATGACCGCCGATGTC
ATCCAGGCCACCCATGAAGAGTGCACGAAGTGCGGTATGGATGGGTACGTCACAAAGCCC
TTCGAGGAGAAGCAGCTCTTCCAGGCGTTGCAGAAGTTCTTGGACCCCGGCATGTCCTGC
TAA

Peptide Sequence

PEP ID

Zm00001d013412_P016
PEP Infomation

pep chromosome:B73_RefGen_v4:5:10600684:10608150:-1 gene:Zm00001d013412 transcript:Zm00001d013412_T016 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histidine kinase 4
Sequence

MCEERARMLQDQFAVSVNHVHALAILVATFHYEKHPPALDQNTFADYTARTSFERPLLSG
VAYAQRVVHADREGFERHQGWIIKTMKHEPSPAQDEYAPVVYSQETVSYIEGLDMMSGEE
DRENILRSRASGKAVLTRPFRLMSNHLGVVLTFPVYHADLPSDAKEEDRVAATAGYLGGA
FDVESLVENLLRQLAGNQELVVNVYDVTNISNPLVMYGSEVPLGNPSPSHICMLDFGDPF
RKHHMVCRYRNKPHVPWSAISTPSGVFVICMLVGYIAGAAWSRYDNVKEDCRKMEELKKQ
AEAADVAKSQFLATVSHEIRTPMNGVLGMLDMLLDTDLTSTQRDFAQTAQVCGKALISLI
NEVLDRAKIEARKLDLESVPFDLRSILDDVISLFSSKSREKGIELDVYVSERVPEILLGD
PGRFRQIITNLVGNSIKFTERGHIFVQVHLADHSNLATESKVEPVANGMNGHTDEKTAVA
TSVSLNTLSGFEAADSRNSWENFKLLLSYEKNEMPYESVSDKVTLVVSVEDTGIGIPLDA
QAKVFTPFMQADSSTSRTYGGTGIGLSISKCLVELMGGQINFVSRPHVGSTFTFTAVLKR
CDRSAIGDSKPVMLHPLPSSFKGLSALLVDRRPVRATVTKYHLQRLGIACDVVATIELAL
GVLSGRNGSSLTSMKQPCMLLIESDSWGFNIDVSLRSRLLEMKQNGHTHVLPKIILLAAA
ESGKLKEHYAVDSVITKPLKASALAACLFQTLGIKQSSNERSDNSGSLYGLLLGKNILVV
DDNKVNLRVAAGTLKKFGAKVECVESGKDALALLQVPYKFHLCLMDIQMPEMDGFEATKQ
IRAMEAKANEQAVACDNSEIDGATRAARWRLPVLAMTADVIQATHEECTKCGMDGYVTKP
FEEKQLFQALQKFLDPGMSC

Transcript Sequence

Transcript ID

Zm00001d013412_T016
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:10600684:10608150:-1 gene:Zm00001d013412 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histidine kinase 4
Sequence

ACACATCAAAGCAGCGGCGGGAGAGCATAGAAGAGAGAGAGAGGATTGGCGAAGGATTCT
CGCGAAGGAGCAGGAGTGGTCGGTGGCCTGCGGCGCAGACCGCAGAGCATGTGAGAGCTG
CGGCGGCTGCGCCGGCGCCGGTGCCGGCGGAGGAGGCGGGGAAGGATGCGGAGGAGGGCG
GCGGGTGGACCGTGAAGGCGAAGCTGATCGCCGCGGCGGTGCTGGTGTGGGTGCTGGGCT
CCGCGGCGCTCTGGGTGTTCCTGCACTCCTACTTCCGCCACGCGGCGCTGCGCAAGGCGG
AGGAGGCGCTCGTCAGCATGTGCGAGGAGCGCGCGCGCATGCTGCAGGACCAGTTCGCCG
TCTCCGTCAACCACGTCCACGCCCTCGCCATCCTCGTCGCCACCTTCCACTACGAGAAGC
ACCCGCCCGCGCTCGACCAGAACACGTTCGCGGACTACACCGCCAGGACGTCGTTCGAGC
GGCCGCTGCTGAGCGGGGTGGCGTACGCGCAGCGGGTGGTGCACGCCGACAGGGAGGGCT
TCGAGCGCCACCAGGGGTGGATCATCAAGACCATGAAGCACGAGCCGTCCCCGGCGCAGG
ACGAGTACGCGCCCGTTGTATACTCGCAGGAGACCGTCTCCTACATCGAGGGGCTCGACA
TGATGTCCGGCGAGGAGGACCGTGAGAACATTCTGAGGTCAAGAGCATCGGGGAAGGCAG
TTCTCACTCGACCATTCCGGCTCATGTCGAATCACCTGGGTGTCGTATTGACTTTTCCTG
TCTATCATGCGGATCTTCCTTCTGATGCCAAGGAGGAGGATCGTGTTGCTGCCACCGCAG
GATACCTTGGGGGAGCATTTGATGTAGAATCATTAGTGGAAAATTTGTTGAGGCAGCTAG
CTGGCAATCAGGAATTGGTGGTAAATGTTTATGATGTCACAAACATTTCGAACCCTCTTG
TCATGTATGGATCAGAAGTTCCTCTTGGCAACCCCTCACCATCGCACATCTGCATGCTAG
ATTTTGGTGATCCATTCAGAAAGCATCATATGGTTTGCAGATACAGAAACAAGCCTCATG
TCCCATGGTCTGCAATTTCTACCCCATCTGGTGTCTTTGTCATATGTATGCTTGTGGGGT
ACATCGCGGGTGCCGCTTGGAGTCGTTATGATAATGTTAAGGAAGATTGCCGGAAAATGG
AGGAGCTGAAAAAACAGGCGGAAGCAGCCGATGTTGCTAAATCTCAGTTCCTTGCAACTG
TTTCTCATGAGATCAGAACGCCCATGAATGGAGTTCTAGGAATGCTTGATATGCTGTTAG
ACACTGACCTAACCTCAACTCAGAGGGATTTTGCACAAACCGCTCAAGTCTGTGGAAAGG
CTTTAATATCGCTAATCAATGAAGTGCTTGACAGAGCGAAAATTGAAGCCAGAAAGTTGG
ATCTTGAATCTGTACCATTTGATCTGAGATCCATCCTTGATGATGTCATCTCATTATTTT
CTTCAAAGTCAAGAGAGAAGGGAATTGAGCTTGATGTATATGTCTCTGAAAGAGTTCCCG
AAATCTTGTTGGGTGATCCTGGAAGGTTTCGACAGATAATTACAAATTTAGTGGGCAACT
CAATTAAGTTCACAGAACGGGGACATATTTTTGTACAAGTTCATCTGGCAGATCATTCAA
ATCTTGCAACAGAATCCAAAGTTGAGCCGGTGGCTAATGGGATGAATGGACATACAGATG
AGAAAACTGCTGTAGCAACCAGTGTTTCTCTCAACACACTAAGTGGTTTTGAAGCTGCTG
ATAGCCGAAATAGTTGGGAAAACTTCAAGCTTTTGCTTTCTTATGAGAAAAATGAGATGC
CCTATGAAAGTGTATCTGATAAAGTTACTCTTGTAGTAAGTGTGGAAGATACAGGAATAG
GTATACCATTGGATGCACAAGCCAAGGTGTTCACACCTTTCATGCAGGCTGATAGTTCGA
CTTCCAGGACATATGGTGGTACTGGAATTGGATTGAGCATCAGCAAATGTCTTGTTGAAC
TAATGGGTGGTCAGATAAACTTTGTCAGCCGACCACATGTTGGGAGTACGTTCACATTTA
CTGCGGTTCTCAAAAGATGTGACAGAAGCGCTATTGGTGACAGTAAGCCTGTTATGTTGC
ATCCTCTTCCATCCAGTTTCAAAGGTTTATCTGCACTATTGGTTGATAGAAGACCAGTAA
GAGCTACTGTAACTAAGTATCACTTGCAAAGGCTGGGAATTGCCTGTGATGTTGTTGCAA
CCATTGAACTGGCTCTTGGTGTGCTGTCCGGGAGAAATGGCAGTTCCCTAACCAGTATGA
AGCAACCATGCATGTTATTGATCGAGAGTGATTCATGGGGCTTCAATATTGATGTTTCTT
TACGATCTAGACTCCTGGAGATGAAGCAGAATGGTCACACACATGTATTACCCAAAATCA
TCCTTCTTGCAGCTGCAGAATCGGGCAAACTCAAAGAACACTATGCAGTTGATTCTGTGA
TCACGAAACCCCTGAAAGCAAGCGCACTTGCCGCTTGTCTGTTCCAAACACTTGGCATCA
AACAGTCAAGCAACGAGAGAAGTGACAACTCAGGTTCTCTTTACGGGTTGCTTCTTGGCA
AGAACATATTGGTGGTTGATGACAACAAGGTAAATCTTAGAGTGGCTGCTGGCACGTTAA
AGAAATTTGGAGCAAAGGTGGAGTGCGTGGAGAGTGGAAAAGATGCCCTCGCCCTCCTAC
AGGTCCCATATAAGTTTCATCTTTGTCTCATGGACATTCAGATGCCCGAAATGGATGGGT
TTGAGGCTACCAAGCAAATAAGGGCAATGGAAGCGAAGGCAAATGAGCAGGCAGTCGCCT
GTGACAATTCAGAAATAGATGGTGCGACAAGGGCAGCAAGATGGCGCCTGCCTGTTCTTG
CAATGACCGCCGATGTCATCCAGGCCACCCATGAAGAGTGCACGAAGTGCGGTATGGATG
GGTACGTCACAAAGCCCTTCGAGGAGAAGCAGCTCTTCCAGGCGTTGCAGAAGTTCTTGG
ACCCCGGCATGTCCTGCTAACGCCGAAGTGATGCGTTGGAGGTGAGGCACTATTCTCCTC
TATTCTGTAATTCCCTAACCTTGGCCGCAACCTGATCCCCAAGAAAGACCGTGCAGCGCG
GGCTGCTCGTCGATCATGCCAGCGGGGAACAGCAGGCAGACAAGGCAGCACGCACCACGG
GCCTTCGCTGGTCTGCCTGCCTGTGCAGGCGTCGTGTAAATGTATTGTATTTGCAGGGAT
ACTGTTTACAGCGCTAGTATGCCCCGTGCCACAATGTCCGAGCTACCTGTGGCTGATGCA
CGTTGCGCATAGGTGGTTTTTTTTGTACAGCTTCCACCATTTTTGTGCTCCAGATCAGAC
CACCGAAGGAGTGCAGCACTGGAAGGAAAACCTGACTTC