Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d013364_T008
CDS Infomation	cds chromosome:B73_RefGen_v4:5:9735754:9740477:1 gene:Zm00001d013364 gene_biotype:protein_coding transcript_biotype:protein_coding description:CSC1-like protein RXW8
Sequence	ATGGAATTCTCTGCTCTTCTGACTTCAGCGGGGATAAACATCGCTGTCTGCGTGCTCTTC TTGTCCCTCTATTCGATCCTCAGGAAGCAGCCTCACAACTTCAGCGTCTACTTTGGGAGG CGGCTTGCTGAAGAGAGGTTCCAGAGGCAGGACGATTACTTCTCGTTTGAGAGGCTACTG CCTACTGCTGGTTGGATTGTAAAGGCGTACTGGTGCACCGAAGAAGAGATTCGACAAGTT GCTGGCTTGGACTCTGTTGTGTTCCTTCGCCTCTTCATTTTCAGCATCCGTATCTTCTCA ATTACTTCTCTTGTTTGTGTATTTGTTGTGCTTCCTGTTAATTATCATGGGAAAGAGATG AATCACAATCATATTCCGGAAGAGTCACTGAATGTTTTTACTATAGCCAATATCGTCGAA GAATCTCGAAAGCTTTGGGTGCACTGCTCTGCTTTATATGTCATAACAATCTCAGCCTGC ATTCTTCTTTTCCACGAATACAAGTATATTTCGAGGAAGAGACTAGCACATGTTACTGGA TATCCTCCAAATCCTGGGCTTTTTACCGTGCTTGTCCGTTCGATTCCGAGGTTTGACAAT GAGCTGCTTGATGACACAATCAGAAATTTCTTTGTTAACTATCACGGATCAAGTTATCTG TCGCATCAAATGATCTTTCGCAAGGGACATTTTCAGAAGTTTGTGGATAGAGCAGAGAGG GCTTACAGGAGATTTGTAAGGGTAAGACTCTCCGTATCTGAGCGGAATGGGAGATCTAGC ATGTCCAGGTGTGGTGTCTGTGGTGTAAGAGCTTCCTCATTTCAGCTTTACCGCAACAAG TTCATCGAGGCCAAGAAGTCAGACCTCACTAATCCGGAAGTAGTGGAAGCTCAAAAGAAC TGTCCCGGTGCCTTAGTGTTCTTCAAGACTCGCTACGCAGCCGTCGTCGCCTCACGGGTA TTCCAGTCATCAAACCCTATGCTATGGGTGACAGATCTGGCTCCTGAGCCACGCGATGTG TATTGGTCAAACCTCTGGATCCCCTACAGACAGATCTGGCTCCGGAAGCTAGCGACACTC GCAGCTAGTATCGTTTTCATGTTCGTGTTCATCGTCCCCGTCGCGTTTGTCCAGAGCATG ATGCAGCTGGAGCAGCTCAAAAGGATGTTCCCGAGCTTGACAGGTCTCCTAAATAAGTCC TTCTTCGCCAGAGTGATAACGGGATACCTTCCTAGCGTCACCTTGCTGCTGTCCCTGTAC ACCGTTCCCCCGCTGATGATGCTCTTCTCCTCTATAGAAGGGTCCATCTCTCGCAGCGGG AGGAAGAGGAGCGGGTGCTTGAAAATCCTCTTCTTCAACATCTGGAACGTCTTCTTTGTG AACGTCCTGTCGGGATCCGTGCTCAACCAGCTCAACGTCTTCTCCAGACCCAAGGACATG CCGACGATGCTAGCTGAACTAGTGCCGAAGCAGGCAACCTTTTTCATCACGTACGTGCTC ACCTCAGGCTGGGCGAGTCTGTGCTCGGAGATACTGCAGGTTTTCAACTTGGTCTACAAC TTCTTCAGCAGGTTCGTCTGCTGCTGCCATCGCCAGAATAAGGAATACGTTTACTCTTTC CCGTACCACACCGAAGTGCCCAAAGTCCTCCTGTTCAACCTGCTCGGCTTCACGTTCTCG ATCATGGCGCCCCTCATACTCCCCTTTCTGCTCGTGTACTTCTGCCTCGGCTACTTGGTG TATCGGAACCAGATTCTGAACGTGTACTACCCAAAGTACGAAATGGGGGGCAAGCTGTGG CCGGTCATGCACAACGCCATCGTGTTCTCGCTGGTCCTGACGCAGGTGATCGCGCTCGGC GTCTTCACCATCAAGCGCTCCCCCGTGACGGCGGGCTTCACCATCCTGCTGCTCGTCGGC ACGGTCCTCTTCAACGAGTACTGCCGGCACCGCTTCTCCCGCATCTTCGAGGCCTACTCC GCCCAGGACGTGATCGAGCTGGACAGGGACGACGAGCAGTCCGGGAGGATGCAGGAGATC CACCAGCATCTGCTGGACGCCTACAGCCAGACCCCGCCGGGGGAGGGATCCTCCAGGGGC GGCAGCCAGGTGCCCATCGAGCTCATCATGGAGGACCCCGCGCAGGAGGCGTCGGAGTCC AGCCAGGAGCTCTGCGACACCGTGCAGGAGGTGTCCGGGGCCATCCACGACCACGACCAC GTCGTCGAGGACAAGGCGCATTCCGTGTAG

Peptide Sequence

PEP ID	Zm00001d013364_P008
PEP Infomation	pep chromosome:B73_RefGen_v4:5:9735754:9740477:1 gene:Zm00001d013364 transcript:Zm00001d013364_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:CSC1-like protein RXW8
Sequence	MEFSALLTSAGINIAVCVLFLSLYSILRKQPHNFSVYFGRRLAEERFQRQDDYFSFERLL PTAGWIVKAYWCTEEEIRQVAGLDSVVFLRLFIFSIRIFSITSLVCVFVVLPVNYHGKEM NHNHIPEESLNVFTIANIVEESRKLWVHCSALYVITISACILLFHEYKYISRKRLAHVTG YPPNPGLFTVLVRSIPRFDNELLDDTIRNFFVNYHGSSYLSHQMIFRKGHFQKFVDRAER AYRRFVRVRLSVSERNGRSSMSRCGVCGVRASSFQLYRNKFIEAKKSDLTNPEVVEAQKN CPGALVFFKTRYAAVVASRVFQSSNPMLWVTDLAPEPRDVYWSNLWIPYRQIWLRKLATL AASIVFMFVFIVPVAFVQSMMQLEQLKRMFPSLTGLLNKSFFARVITGYLPSVTLLLSLY TVPPLMMLFSSIEGSISRSGRKRSGCLKILFFNIWNVFFVNVLSGSVLNQLNVFSRPKDM PTMLAELVPKQATFFITYVLTSGWASLCSEILQVFNLVYNFFSRFVCCCHRQNKEYVYSF PYHTEVPKVLLFNLLGFTFSIMAPLILPFLLVYFCLGYLVYRNQILNVYYPKYEMGGKLW PVMHNAIVFSLVLTQVIALGVFTIKRSPVTAGFTILLLVGTVLFNEYCRHRFSRIFEAYS AQDVIELDRDDEQSGRMQEIHQHLLDAYSQTPPGEGSSRGGSQVPIELIMEDPAQEASES SQELCDTVQEVSGAIHDHDHVVEDKAHSV

Transcript Sequence

Transcript ID	Zm00001d013364_T008
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:9735754:9740477:1 gene:Zm00001d013364 gene_biotype:protein_coding transcript_biotype:protein_coding description:CSC1-like protein RXW8
Sequence	GCAGAACCGGCTGGGTTTTGACGCGGAGGTGGTATCAGCACAGACTGCAGCATCAGACTT ATTTGGCTGGAGAAATCAGGGATCATCAGAGTCAAAGGCAACAAGATTCTGCTACCATAT CAGTGCAAGCGAATGGCTGACTGTTTAAAGACATGCCTGGATCTTCTATTGTGAATTCGC AGTTCTTTCATGGGTGGATTGTCAGGATCCCAAACTGGTAGAGGTGGGGGATGGAATTCT CTGCTCTTCTGACTTCAGCGGGGATAAACATCGCTGTCTGCGTGCTCTTCTTGTCCCTCT ATTCGATCCTCAGGAAGCAGCCTCACAACTTCAGCGTCTACTTTGGGAGGCGGCTTGCTG AAGAGAGGTTCCAGAGGCAGGACGATTACTTCTCGTTTGAGAGGCTACTGCCTACTGCTG GTTGGATTGTAAAGGCGTACTGGTGCACCGAAGAAGAGATTCGACAAGTTGCTGGCTTGG ACTCTGTTGTGTTCCTTCGCCTCTTCATTTTCAGCATCCGTATCTTCTCAATTACTTCTC TTGTTTGTGTATTTGTTGTGCTTCCTGTTAATTATCATGGGAAAGAGATGAATCACAATC ATATTCCGGAAGAGTCACTGAATGTTTTTACTATAGCCAATATCGTCGAAGAATCTCGAA AGCTTTGGGTGCACTGCTCTGCTTTATATGTCATAACAATCTCAGCCTGCATTCTTCTTT TCCACGAATACAAGTATATTTCGAGGAAGAGACTAGCACATGTTACTGGATATCCTCCAA ATCCTGGGCTTTTTACCGTGCTTGTCCGTTCGATTCCGAGGTTTGACAATGAGCTGCTTG ATGACACAATCAGAAATTTCTTTGTTAACTATCACGGATCAAGTTATCTGTCGCATCAAA TGATCTTTCGCAAGGGACATTTTCAGAAGTTTGTGGATAGAGCAGAGAGGGCTTACAGGA GATTTGTAAGGGTAAGACTCTCCGTATCTGAGCGGAATGGGAGATCTAGCATGTCCAGGT GTGGTGTCTGTGGTGTAAGAGCTTCCTCATTTCAGCTTTACCGCAACAAGTTCATCGAGG CCAAGAAGTCAGACCTCACTAATCCGGAAGTAGTGGAAGCTCAAAAGAACTGTCCCGGTG CCTTAGTGTTCTTCAAGACTCGCTACGCAGCCGTCGTCGCCTCACGGGTATTCCAGTCAT CAAACCCTATGCTATGGGTGACAGATCTGGCTCCTGAGCCACGCGATGTGTATTGGTCAA ACCTCTGGATCCCCTACAGACAGATCTGGCTCCGGAAGCTAGCGACACTCGCAGCTAGTA TCGTTTTCATGTTCGTGTTCATCGTCCCCGTCGCGTTTGTCCAGAGCATGATGCAGCTGG AGCAGCTCAAAAGGATGTTCCCGAGCTTGACAGGTCTCCTAAATAAGTCCTTCTTCGCCA GAGTGATAACGGGATACCTTCCTAGCGTCACCTTGCTGCTGTCCCTGTACACCGTTCCCC CGCTGATGATGCTCTTCTCCTCTATAGAAGGGTCCATCTCTCGCAGCGGGAGGAAGAGGA GCGGGTGCTTGAAAATCCTCTTCTTCAACATCTGGAACGTCTTCTTTGTGAACGTCCTGT CGGGATCCGTGCTCAACCAGCTCAACGTCTTCTCCAGACCCAAGGACATGCCGACGATGC TAGCTGAACTAGTGCCGAAGCAGGCAACCTTTTTCATCACGTACGTGCTCACCTCAGGCT GGGCGAGTCTGTGCTCGGAGATACTGCAGGTTTTCAACTTGGTCTACAACTTCTTCAGCA GGTTCGTCTGCTGCTGCCATCGCCAGAATAAGGAATACGTTTACTCTTTCCCGTACCACA CCGAAGTGCCCAAAGTCCTCCTGTTCAACCTGCTCGGCTTCACGTTCTCGATCATGGCGC CCCTCATACTCCCCTTTCTGCTCGTGTACTTCTGCCTCGGCTACTTGGTGTATCGGAACC AGATTCTGAACGTGTACTACCCAAAGTACGAAATGGGGGGCAAGCTGTGGCCGGTCATGC ACAACGCCATCGTGTTCTCGCTGGTCCTGACGCAGGTGATCGCGCTCGGCGTCTTCACCA TCAAGCGCTCCCCCGTGACGGCGGGCTTCACCATCCTGCTGCTCGTCGGCACGGTCCTCT TCAACGAGTACTGCCGGCACCGCTTCTCCCGCATCTTCGAGGCCTACTCCGCCCAGGACG TGATCGAGCTGGACAGGGACGACGAGCAGTCCGGGAGGATGCAGGAGATCCACCAGCATC TGCTGGACGCCTACAGCCAGACCCCGCCGGGGGAGGGATCCTCCAGGGGCGGCAGCCAGG TGCCCATCGAGCTCATCATGGAGGACCCCGCGCAGGAGGCGTCGGAGTCCAGCCAGGAGC TCTGCGACACCGTGCAGGAGGTGTCCGGGGCCATCCACGACCACGACCACGTCGTCGAGG ACAAGGCGCATTCCGTGTAGACTAGATGGTCTGGACTCTCTGCGGGTGCGTACGCATGTA GATGCTGTACAGCGCGCATAGCAGACTCGAAACCCGGAAGCAAATACTTACATTTATAAA TCTACGTGTATAGAAACAACAGTCTAATCTATTGGCAATCGGGTACTTTGGCCCGGC