Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d013314_T013
CDS Infomation	cds chromosome:B73_RefGen_v4:5:8364358:8378035:-1 gene:Zm00001d013314 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:vesicular transport protein1 description:Vps51/Vps67 family (components of vesicular transport) protein
Sequence	ATGGCGACAGCCGGTGGCGCCGCACCGGCGGCAATGGACGAGAAGGCGCGGCGCACGCGC GACCTCCTTGCTAGCTTCTACAACACCGACCCGTCCGCGGCCGCCGGGGGTGCCGCGGCC CCCGCGTTCCTGGCGCGCCCGTCCCCTACCGCCGCGCCCGCATCGCCCCTCGACTCAATC AACTCCACCTCCTTCGATCCCGACATCTACATGAATGTCCTGGTGCAACAATCCAATCTG GAAGGTCTTCTACAAAGGCATGTGAAGATGGCTACTGAGATCAAGAACCTAGACACAGAT TTACAGATGCTAGTGTATGAGAATTATAACAAGTTTATTAGTGCAACTGACACTATAAAA AGGATGAAGACTAACATTGTTGGAATGGAGGCAAATATGGAGCAGCTCCTTACAAAGATA ACATCAGTGCAATCAAGAAGCGACACAGTGAATACATCTCTTTTTGACAAAAGGGAAAAC ATTGAGAAATTACATCGCACACGCAATCTGCTCCGGAAAGTTCAATTCATATATGACCTT CCAACTCGTCTTAACAAATGCATCAAGACAGAAGCATATGCAGATGCTGTCAGGTTTTTT ACTGGAGCAAAACCTATTTTTGAGGCCTATGGAGATACATCCTTTCGAGACTGTAAAAAG GCTTCTGAGGAGGCAATGGATGTAGTTATACAACACCTTCAGACAAAGTTATACTCAGAT TCTGAACCTATTGAAGCAAGAGCAGAAGCTGTAGTTCTCCTTAAACAATTGAAGTTTCCA GTGGACAACTTAAAATCGAATCTACTTGAGAAGCTGGAAGAATGTCTCTTGAATTTCCAG AATGAGACTACACATGCTTCAATTGGTGACATCTCAAAGACATTTCGTGCTTATTTAATA ATATTTCCTGATTCAGAAAGGCGTCTCATTGAACTTGCACAAGCTTTGTTCTTAAACCGA TATGAGACAGTCAGAGAGAATCTGAAGAAAAGAATTCCATCAACAGATCTACTGGCAATG CTACGATCCTTATGGGAGGATGCAACCATCATCGATGAGGTTATTTCAGAGGCTGCGCTA CCAGCTTTTTCTTTGGAGACTACTCGAGACATTGTTAAGCAACACATAGCAACTGCATTT CTCCATCTTCAAAGTGAAATATCAGAGGCACTGGTTAGGACACATTCAACATCAAATGAG AAGTTGGAAGAGTCACAGCTGCAAACTGCTATGGAGACAAGCAAAATCAAAGTATCCCAA GGATGCATAGATCTCCTGCAGGAATTTCATCATCTGGTAGATGGCAATATAGAGTTGCTT GTTAAGCTGAGGGATTTGATTATTGATTGGGTACAAGAAGGTTTTCAAGAGTTTTTCCAG AAACTTGATGGACATTTTCATGTGCTTTCTGGGAGAAGCAAAACAAATTTACAAGAGCCA ACTATGGATTCTATGCAAACTGATAAGACCCCAACAGTCTTGGTACTTATGCTTGCACAA CTCTGTGTTTACATTGAACAAACAACAGTCCCTAAAGTTACAGAGGAGTTAGCTTCTTTT TTTGGAGGTGGTGCACATAGCTACGAATATGGACCACCTTTTGTGCCTGGAGAAATATGT CGGCTATATCGATCATCTGGAGAGAAATTCTTGCACCATTACATAAATATGAAGACCCAG AAGATCTCCAAACTTCTTAACAAGCGATTTACAACACCAGTTTGGATTAAGCACAAGGAA CCTAGGGAAGTGAACATGTTTGTTGATCTACTTCTCCTAGAGATCAATGGTCTGGTATCT GAAGTCAAGCAGATCTTACCTGGTATGGTTCGGCGACATCGGCATTCAGATAGCACTGGT AGCACGACTTCCTCCAGAAGCAATCCAATGCGAGAAGACATGTTGAACCGATCAAACACA CATCGTGCTAGAAGTCAGTTTTTAGAAAATCACCTGGCAAAGTTATTTGAGCAAAAAATG GAAATATTCACCAAAGTTGAATACACACAGGAATCTGTTATTTCTACTGTCCTCAAGCTC TGCCTGAAAAGCTTGCAAGAATTTGTCCGTCTTCAGACTTTCAACAGAAGTGGATTTCAG CAGATTCAGCTGGATATGGAATTTCTCAAGACCTCTCTTAAGGAATTTGTGGATGATGAA GCAGCCATTAGCTTTTTACTCAAAGAGGTGAACAATGCTGCCCATGAGAGATGTCTTGAC CCAATCCCTCTTGAGCCCCCCATATTAGATAAGCTCATAAATGCAAAACTAGCAAAAATT AAAGAGAGAAACCCAAATATGCGGTAG

Peptide Sequence

PEP ID	Zm00001d013314_P013
PEP Infomation	pep chromosome:B73_RefGen_v4:5:8364358:8378035:-1 gene:Zm00001d013314 transcript:Zm00001d013314_T013 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:vesicular transport protein1 description:Vps51/Vps67 family (components of vesicular transport) protein
Sequence	MATAGGAAPAAMDEKARRTRDLLASFYNTDPSAAAGGAAAPAFLARPSPTAAPASPLDSI NSTSFDPDIYMNVLVQQSNLEGLLQRHVKMATEIKNLDTDLQMLVYENYNKFISATDTIK RMKTNIVGMEANMEQLLTKITSVQSRSDTVNTSLFDKRENIEKLHRTRNLLRKVQFIYDL PTRLNKCIKTEAYADAVRFFTGAKPIFEAYGDTSFRDCKKASEEAMDVVIQHLQTKLYSD SEPIEARAEAVVLLKQLKFPVDNLKSNLLEKLEECLLNFQNETTHASIGDISKTFRAYLI IFPDSERRLIELAQALFLNRYETVRENLKKRIPSTDLLAMLRSLWEDATIIDEVISEAAL PAFSLETTRDIVKQHIATAFLHLQSEISEALVRTHSTSNEKLEESQLQTAMETSKIKVSQ GCIDLLQEFHHLVDGNIELLVKLRDLIIDWVQEGFQEFFQKLDGHFHVLSGRSKTNLQEP TMDSMQTDKTPTVLVLMLAQLCVYIEQTTVPKVTEELASFFGGGAHSYEYGPPFVPGEIC RLYRSSGEKFLHHYINMKTQKISKLLNKRFTTPVWIKHKEPREVNMFVDLLLLEINGLVS EVKQILPGMVRRHRHSDSTGSTTSSRSNPMREDMLNRSNTHRARSQFLENHLAKLFEQKM EIFTKVEYTQESVISTVLKLCLKSLQEFVRLQTFNRSGFQQIQLDMEFLKTSLKEFVDDE AAISFLLKEVNNAAHERCLDPIPLEPPILDKLINAKLAKIKERNPNMR

Transcript Sequence

Transcript ID	Zm00001d013314_T013
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:8364358:8378035:-1 gene:Zm00001d013314 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:vesicular transport protein1 description:Vps51/Vps67 family (components of vesicular transport) protein
Sequence	GCTCTTAACCTCTCTTTACGCTTGGAAAGGAAACTTTCCAAAACACCCCTTGGCATTCTC CATCTCCACTCCCACAGCCTCTCTGGTCTCTCCGGCGCCTCGACTGCGAGACCCACCGCG ACGCCCCACCGATATGGCGACAGCCGGTGGCGCCGCACCGGCGGCAATGGACGAGAAGGC GCGGCGCACGCGCGACCTCCTTGCTAGCTTCTACAACACCGACCCGTCCGCGGCCGCCGG GGGTGCCGCGGCCCCCGCGTTCCTGGCGCGCCCGTCCCCTACCGCCGCGCCCGCATCGCC CCTCGACTCAATCAACTCCACCTCCTTCGATCCCGACATCTACATGAATGTCCTGGTGCA ACAATCCAATCTGGAAGGTCTTCTACAAAGGCATGTGAAGATGGCTACTGAGATCAAGAA CCTAGACACAGATTTACAGATGCTAGTGTATGAGAATTATAACAAGTTTATTAGTGCAAC TGACACTATAAAAAGGATGAAGACTAACATTGTTGGAATGGAGGCAAATATGGAGCAGCT CCTTACAAAGATAACATCAGTGCAATCAAGAAGCGACACAGTGAATACATCTCTTTTTGA CAAAAGGGAAAACATTGAGAAATTACATCGCACACGCAATCTGCTCCGGAAAGTTCAATT CATATATGACCTTCCAACTCGTCTTAACAAATGCATCAAGACAGAAGCATATGCAGATGC TGTCAGGTTTTTTACTGGAGCAAAACCTATTTTTGAGGCCTATGGAGATACATCCTTTCG AGACTGTAAAAAGGCTTCTGAGGAGGCAATGGATGTAGTTATACAACACCTTCAGACAAA GTTATACTCAGATTCTGAACCTATTGAAGCAAGAGCAGAAGCTGTAGTTCTCCTTAAACA ATTGAAGTTTCCAGTGGACAACTTAAAATCGAATCTACTTGAGAAGCTGGAAGAATGTCT CTTGAATTTCCAGAATGAGACTACACATGCTTCAATTGGTGACATCTCAAAGACATTTCG TGCTTATTTAATAATATTTCCTGATTCAGAAAGGCGTCTCATTGAACTTGCACAAGCTTT GTTCTTAAACCGATATGAGACAGTCAGAGAGAATCTGAAGAAAAGAATTCCATCAACAGA TCTACTGGCAATGCTACGATCCTTATGGGAGGATGCAACCATCATCGATGAGGTTATTTC AGAGGCTGCGCTACCAGCTTTTTCTTTGGAGACTACTCGAGACATTGTTAAGCAACACAT AGCAACTGCATTTCTCCATCTTCAAAGTGAAATATCAGAGGCACTGGTTAGGACACATTC AACATCAAATGAGAAGTTGGAAGAGTCACAGCTGCAAACTGCTATGGAGACAAGCAAAAT CAAAGTATCCCAAGGATGCATAGATCTCCTGCAGGAATTTCATCATCTGGTAGATGGCAA TATAGAGTTGCTTGTTAAGCTGAGGGATTTGATTATTGATTGGGTACAAGAAGGTTTTCA AGAGTTTTTCCAGAAACTTGATGGACATTTTCATGTGCTTTCTGGGAGAAGCAAAACAAA TTTACAAGAGCCAACTATGGATTCTATGCAAACTGATAAGACCCCAACAGTCTTGGTACT TATGCTTGCACAACTCTGTGTTTACATTGAACAAACAACAGTCCCTAAAGTTACAGAGGA GTTAGCTTCTTTTTTTGGAGGTGGTGCACATAGCTACGAATATGGACCACCTTTTGTGCC TGGAGAAATATGTCGGCTATATCGATCATCTGGAGAGAAATTCTTGCACCATTACATAAA TATGAAGACCCAGAAGATCTCCAAACTTCTTAACAAGCGATTTACAACACCAGTTTGGAT TAAGCACAAGGAACCTAGGGAAGTGAACATGTTTGTTGATCTACTTCTCCTAGAGATCAA TGGTCTGGTATCTGAAGTCAAGCAGATCTTACCTGGTATGGTTCGGCGACATCGGCATTC AGATAGCACTGGTAGCACGACTTCCTCCAGAAGCAATCCAATGCGAGAAGACATGTTGAA CCGATCAAACACACATCGTGCTAGAAGTCAGTTTTTAGAAAATCACCTGGCAAAGTTATT TGAGCAAAAAATGGAAATATTCACCAAAGTTGAATACACACAGGAATCTGTTATTTCTAC TGTCCTCAAGCTCTGCCTGAAAAGCTTGCAAGAATTTGTCCGTCTTCAGACTTTCAACAG AAGTGGATTTCAGCAGATTCAGCTGGATATGGAATTTCTCAAGACCTCTCTTAAGGAATT TGTGGATGATGAAGCAGCCATTAGCTTTTTACTCAAAGAGGTGAACAATGCTGCCCATGA GAGATGTCTTGACCCAATCCCTCTTGAGCCCCCCATATTAGATAAGCTCATAAATGCAAA ACTAGCAAAAATTAAAGAGAGAAACCCAAATATGCGGTAGCTATGCACAGATTGGTGTCG TTTACTAGAATTCAGTTCTGTCCATTTGAATGCACTATTCAGAGTTGTGTGTGCAACTTC ATAGAGTTTAGGGCACATAGCATGGATGAAAATCTGGAGTCAGACTCAGATTTGAATAAC ACTCCCCAAATTGTATACTGGTATACTTAATTTGGGGTGGTCGAGCTGTT