Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d013295_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:7990163:7991833:-1 gene:Zm00001d013295 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:photosystemI3 description:Nuclear pore complex protein Nup214
Sequence

ATGGGGGCGCTACCCGTCGCCCACAGTCTCGCTCTCACCGCCGCGTTCCTCCCGTGCCGC
CGCCCCGCGGCCCACGGCCGGTGCCGGCGCCGGCGGTACAGAGCGGTGGTGGCGTACATG
GAGCCGAACCCCAACTCGCCGGCGGCCATCGCGGGGCGCCTCGTCGGCGCCCTTCCCATC
GTGGGCCTCGTGGCGCGCATCCTCAACGACGAGGGCGGCGTCGGCGGCGACATCATCGAC
TTCGCCGAGTTCCGCCGCCGCGTCAGCAAGAAGTGCACGGTCATGGACTCCAAGGCCTTC
TACGACTTCAACCAACGACGCGGGAAGCCAGGCGATCCCTTCTACGTTCTACTGTGCTGC
TGGCTGGCCGCCATCGGCGCCGGGCTGCTCAAAACGGAGGAGATCTTGGAAGGCGTGGCG
CGCCTCCGCATCTCCAACGACATCGAGTTCGAGGAGGAGACGTTCATCGACATGATGAGG
GCGGCAAAGGAGAAAAGGGCGAAGCTGAAGGCTCCTGCTCCGCAGATACCGATGGAGACG
CGGGCGGAGAAGGCCCTCGAAGCCATCTACGTGTGCTGCTTCGGTCAGGACATGGTGGAG
GACGAGGACGAGAAGCTTCTCCGGGCGATACTGAACGCCGTGTTCCCCTCCGTCGGGCGG
GCCGCGGTCGAGAGGATGGTGGCGTCCATGGCCAAGCAGGTGGCCTCCGGCGAGAGGAAG
CGGGACGGGAGGACCGTGTCCAAGGAAGTGCAGCAGCGGCAGCTCAAGGACCTGGAGTTT
CTGAAGCAGAACAAGCTGGAGTCGTCGTGA

Peptide Sequence

PEP ID

Zm00001d013295_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:7990163:7991833:-1 gene:Zm00001d013295 transcript:Zm00001d013295_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:photosystemI3 description:Nuclear pore complex protein Nup214
Sequence

MGALPVAHSLALTAAFLPCRRPAAHGRCRRRRYRAVVAYMEPNPNSPAAIAGRLVGALPI
VGLVARILNDEGGVGGDIIDFAEFRRRVSKKCTVMDSKAFYDFNQRRGKPGDPFYVLLCC
WLAAIGAGLLKTEEILEGVARLRISNDIEFEEETFIDMMRAAKEKRAKLKAPAPQIPMET
RAEKALEAIYVCCFGQDMVEDEDEKLLRAILNAVFPSVGRAAVERMVASMAKQVASGERK
RDGRTVSKEVQQRQLKDLEFLKQNKLESS

Transcript Sequence

Transcript ID

Zm00001d013295_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:7990163:7991833:-1 gene:Zm00001d013295 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:photosystemI3 description:Nuclear pore complex protein Nup214
Sequence

CAGGAACGCTACCCTTGTTCTATCCTATCCGGCTATCCCCATTCGGCCACTCTCCAGTCC
GCGGAAGGGTGGCGGACGGCGAGGAAAGGGTGCGAGGTGAGCGGGAAGACGGCAGCCCGG
TCGATTCGAGGCGCGGAAGTGCCACTCGGCGAGGCACGACCGCTGGCAGGGCTGACGCGG
TTTCCACAGCCGCCCGCCCGCCTTCATCAGAGTCCATAATCCAAGCTCTAAACAGGTTCG
TCCATGAGCAGATAAGGCGCGCGCCACGCCGCGGCCACCACACGTACGTAAGGCGCCAAC
CCCATCTCCGGGAAAGTATGGGGGCGCTACCCGTCGCCCACAGTCTCGCTCTCACCGCCG
CGTTCCTCCCGTGCCGCCGCCCCGCGGCCCACGGCCGGTGCCGGCGCCGGCGGTACAGAG
CGGTGGTGGCGTACATGGAGCCGAACCCCAACTCGCCGGCGGCCATCGCGGGGCGCCTCG
TCGGCGCCCTTCCCATCGTGGGCCTCGTGGCGCGCATCCTCAACGACGAGGGCGGCGTCG
GCGGCGACATCATCGACTTCGCCGAGTTCCGCCGCCGCGTCAGCAAGAAGTGCACGGTCA
TGGACTCCAAGGCCTTCTACGACTTCAACCAACGACGCGGGAAGCCAGGCGATCCCTTCT
ACGTTCTACTGTGCTGCTGGCTGGCCGCCATCGGCGCCGGGCTGCTCAAAACGGAGGAGA
TCTTGGAAGGCGTGGCGCGCCTCCGCATCTCCAACGACATCGAGTTCGAGGAGGAGACGT
TCATCGACATGATGAGGGCGGCAAAGGAGAAAAGGGCGAAGCTGAAGGCTCCTGCTCCGC
AGATACCGATGGAGACGCGGGCGGAGAAGGCCCTCGAAGCCATCTACGTGTGCTGCTTCG
GTCAGGACATGGTGGAGGACGAGGACGAGAAGCTTCTCCGGGCGATACTGAACGCCGTGT
TCCCCTCCGTCGGGCGGGCCGCGGTCGAGAGGATGGTGGCGTCCATGGCCAAGCAGGTGG
CCTCCGGCGAGAGGAAGCGGGACGGGAGGACCGTGTCCAAGGAAGTGCAGCAGCGGCAGC
TCAAGGACCTGGAGTTTCTGAAGCAGAACAAGCTGGAGTCGTCGTGAAGCAGCAGCGGCG
GCGAGCAGAAACTTGGCAGCAAATCACGCGGCGTGGTTCGCCGGCGGCTGCAGCAGCCTT
GCTTTCGGTTCGTTTTGGAACAACGGATTCATGGTGGAATTTTGTAGGATTATTAGAACA
GAACTCTATGTGAATTTGTAACCCTTTGGAAGTTGGAACAAGGAAGTGGCCATACTGAAA
TCCTACATGCCCTTTTTGGAACCGTGGTATGCTGAACACTGGGCTTCATAAAAATATTAT
CTCCAACATTGTAATTAGATTTGTAGTATTATAATCATAATTCATAACCACCGCTTCTTT
GT