Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d013278_T101
CDS Infomation	cds chromosome:B73_RefGen_v4:5:7711428:7714779:-1 gene:Zm00001d013278 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 25 description:Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein
Sequence	ATGCCCGACAACACTGGGCTTGAAATTGGCCTTAAAGGCTCCAAGGGAGCCCCAATGCCA GGAACGGAAGGAAGAGTGGCAAAGGATTTGAAGAAAGCTCCTGCCTCCTTGGAGGAAAGC AATGCTTCTCGTGATGAGGATCCTGGCGGAGGGCCTGCCTTGACTGGGAAGAAAAGGAAG GACCGGAGGGGTTCCGCGGATGACAACAGGAATGTGACAAGAAGGGTGTTGAGGTCCGAC GCCATGAAGCTGCGTGCTGAGGCTGAGGCACCATGTGGAGCGGGTGTGGAGGTTAGCAAA ACTGATAGTTTGGAGAGGAAACACTGTGACACTACTGTGGAGGCTGAGGCTTGCAAAAGT AGTGTGCTGATGGAAGTTGCCTGCAATGGTGGGGAAGCCAACGGATTAGTTAACTTGGAT GCGAGCGATGTTTCGGAAGAATCAACTAGGTGTTCTGATAATAATATGGGAATGCCTGGT GTTCCTGCAACAGATTTTTCTCAAGATGGTGGCTTAGCTCAAGGTAGCATTGCAGAATCA GATGATAAGACAGTCAAGTCAGATGAGGTGTCCGCTGTAACTCATTCAGAGCAGAATGAC TCCCAAGCTGGAATAAACAGTTATAATGCTGATGAGGCCCAAGATAACAAAGTGAGACAT GGGCCTTGTCAGGATGAGGTCATAGACTCAGCAATTACTAATGGTGCCAACACAAGTACA GATTTAACCAAAACCAGCCCTACCAGTGGATCAGAATCTGTTAAGCAGGATGATAGTAAG CAGGAGAATAATTTGGTTCATACTGAAGGAGTGATACTCCACAGTGGTGATCCGAAAGTT GAGAATCATTCTCAAATTGAGGACACTTGTACAGAAACTGAGATTTCTTTGACTGGGAAT GGAAGATGTGCAGCTGATAACCACACTGATCGAACTGGGTACACTAAGCAGGAGGAGAGG GGCAGCCCTGTGAACGAAACCAATGATATTTCGGCACATGACATTGTTTTTACAAGGAGA GGTAGAAAATCATGTGAGGCAAAGCAGGGGACATGTGAAGAGGAGTCACGGTTTGAGAAG CGAGTTACGAGATCAGCTACAGTTAGACAGAGAGAAGTTTCTGGAAGCTTATGCAAAACT ACCACGAATGAGACTGCACTAGGAAGCAGAGGGAGGAAGGGAGATATTATTGCTCACTAT ACAAGGAAAGTGAGCAGTGCAGTATCTCCAAAAGGTCACCATGCTGAGCTGGGAGAATGT AATACCAGTATGGAGAATCAAACAGTGAAACAAAAGGTGGTTGATCGAAGAGATTCAGGT GCCACTAAGAATGATAATGATGCGAATGACACAAAGAATAAGGAATCAGAAAAGACAGAG ATCAATCTGAAGACGCAACCACCTGTTGGAAGTGTTAGCATTGTAAATAAAACAACTGTA GGAGCTGTTTCTGTGGTGGGTCAGAGTATCTCTGGTTCAGCCATCACTGAGAGAAATGAT ACAGATCATACTGATTCTGATGGAGTTAAATATGAAAATATGACTCTTGTGCAGAAACTA CTACTGTCTGTTGGCGCGAAGATTGTTGCCAGCAAGAAGAGGGTATTGGAAGCAGGTCCT GATAAAACCACTGGAAGGTCACCAATTGCTTTGCCATCCATGAAAAAGACAAGAAATACG TCTTCTGATCCTGAGATAGATCAACCTGATAAGTCTTCTGGAGAGAAGCTTATTGGAAAT AACTGTGATTTGGGCAATAAACGTGTTTTGAGGGAACGGCAGCATCAGAATCAAACATAT TTGTCAAGCAGGTCTTCTAACCAGTCTAATCAAAATGCTATCAAGCAGACACAGGATCAA TCTGACGATGATGACATCAGCAGCGATACTTCCTACAGGAGAACTCGTAGCGGACGTCGT CGTGGTGCTGCCCGTCTTGCCGTGCCAAAACAAGAGGACTCCAGTGATTCTGAAGAAGTT GTTGTTGTGAAAAAGAATCGACGGAAACGTAAGAAATCTGTGCATAAACACAGGGCTGGA TCTAAGTTGAAGCATACTTCTGGTAGTCCTCCCAAAACAGGTCGTTTGGGTAGACCTCCA CTTGTCAAATCTGAATGTGGCTGCTTACCTCTGCAGCCAGGAAAAGGGAAAATGAATGTG CCTGAAGGTACAGGAGCTCTACGCGAAGAAAAACAAAAAATAAGTGATCAGATAAAGGCC ATGCTTCTAGATGCTGGTTGGACAATTGATTTAAGACCCAGGAATGGTAGAAACTACATG GATTCCGTGTATATACATCCTAGTGGCAAAGGGTCTTACTGGTCAGTTACAAAAGCATAT TACGTGTTCCGTGCAGATATGGAATCTGAGCAGAAGGAAAGTTCTAAAGACCATATTCTG TCAAAAAAATCTGTTGGTAGCCCCGGCAAAAGGCAGGTCTCTAGTTCTTCAGGCTGTACT TTAACAGATGATATCCTTAGCAAATTAAAAAGAGTTGTTGTAAACAAACGAACAACCAAA GTAGAGATTCAAAGGTTG

Peptide Sequence

PEP ID	Zm00001d013278_P101
PEP Infomation	pep chromosome:B73_RefGen_v4:5:7711428:7714779:-1 gene:Zm00001d013278 transcript:Zm00001d013278_T101 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 25 description:Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein
Sequence	MPDNTGLEIGLKGSKGAPMPGTEGRVAKDLKKAPASLEESNASRDEDPGGGPALTGKKRK DRRGSADDNRNVTRRVLRSDAMKLRAEAEAPCGAGVEVSKTDSLERKHCDTTVEAEACKS SVLMEVACNGGEANGLVNLDASDVSEESTRCSDNNMGMPGVPATDFSQDGGLAQGSIAES DDKTVKSDEVSAVTHSEQNDSQAGINSYNADEAQDNKVRHGPCQDEVIDSAITNGANTST DLTKTSPTSGSESVKQDDSKQENNLVHTEGVILHSGDPKVENHSQIEDTCTETEISLTGN GRCAADNHTDRTGYTKQEERGSPVNETNDISAHDIVFTRRGRKSCEAKQGTCEEESRFEK RVTRSATVRQREVSGSLCKTTTNETALGSRGRKGDIIAHYTRKVSSAVSPKGHHAELGEC NTSMENQTVKQKVVDRRDSGATKNDNDANDTKNKESEKTEINLKTQPPVGSVSIVNKTTV GAVSVVGQSISGSAITERNDTDHTDSDGVKYENMTLVQKLLLSVGAKIVASKKRVLEAGP DKTTGRSPIALPSMKKTRNTSSDPEIDQPDKSSGEKLIGNNCDLGNKRVLRERQHQNQTY LSSRSSNQSNQNAIKQTQDQSDDDDISSDTSYRRTRSGRRRGAARLAVPKQEDSSDSEEV VVVKKNRRKRKKSVHKHRAGSKLKHTSGSPPKTGRLGRPPLVKSECGCLPLQPGKGKMNV PEGTGALREEKQKISDQIKAMLLDAGWTIDLRPRNGRNYMDSVYIHPSGKGSYWSVTKAY YVFRADMESEQKESSKDHILSKKSVGSPGKRQVSSSSGCTLTDDILSKLKRVVVNKRTTK VEIQRL

Transcript Sequence

Transcript ID	Zm00001d013278_T101
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:7711428:7714779:-1 gene:Zm00001d013278 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 25 description:Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein
Sequence	ACGCGAGAGCACTCTAGTCTCGAGCACAGCACAAGGCCGCCGGTCCCTTCTCTCCCACTC CCACTACTCGCGCTCGCCGCTGGATCCTCCACCCGCCGCGGCGCCAGGCCGGAGATCCAG CAGCTGGGACCACGGAGGTCGGCCGGTTGCTCCGTTCCCGCTGGTGGTTGCTCTTCGGCC GCTGGAGATCGGCAGACGGAAGCAGTTGACGCCACAGGGCTTCGTGCTGCCGAATTCCCC AGATATTCTGGGGGTTCAACCGAACCCCCATGCCCGACAACACTGGGCTTGAAATTGGCC TTAAAGGCTCCAAGGGAGCCCCAATGCCAGGAACGGAAGGAAGAGTGGCAAAGGATTTGA AGAAAGCTCCTGCCTCCTTGGAGGAAAGCAATGCTTCTCGTGATGAGGATCCTGGCGGAG GGCCTGCCTTGACTGGGAAGAAAAGGAAGGACCGGAGGGGTTCCGCGGATGACAACAGGA ATGTGACAAGAAGGGTGTTGAGGTCCGACGCCATGAAGCTGCGTGCTGAGGCTGAGGCAC CATGTGGAGCGGGTGTGGAGGTTAGCAAAACTGATAGTTTGGAGAGGAAACACTGTGACA CTACTGTGGAGGCTGAGGCTTGCAAAAGTAGTGTGCTGATGGAAGTTGCCTGCAATGGTG GGGAAGCCAACGGATTAGTTAACTTGGATGCGAGCGATGTTTCGGAAGAATCAACTAGGT GTTCTGATAATAATATGGGAATGCCTGGTGTTCCTGCAACAGATTTTTCTCAAGATGGTG GCTTAGCTCAAGGTAGCATTGCAGAATCAGATGATAAGACAGTCAAGTCAGATGAGGTGT CCGCTGTAACTCATTCAGAGCAGAATGACTCCCAAGCTGGAATAAACAGTTATAATGCTG ATGAGGCCCAAGATAACAAAGTGAGACATGGGCCTTGTCAGGATGAGGTCATAGACTCAG CAATTACTAATGGTGCCAACACAAGTACAGATTTAACCAAAACCAGCCCTACCAGTGGAT CAGAATCTGTTAAGCAGGATGATAGTAAGCAGGAGAATAATTTGGTTCATACTGAAGGAG TGATACTCCACAGTGGTGATCCGAAAGTTGAGAATCATTCTCAAATTGAGGACACTTGTA CAGAAACTGAGATTTCTTTGACTGGGAATGGAAGATGTGCAGCTGATAACCACACTGATC GAACTGGGTACACTAAGCAGGAGGAGAGGGGCAGCCCTGTGAACGAAACCAATGATATTT CGGCACATGACATTGTTTTTACAAGGAGAGGTAGAAAATCATGTGAGGCAAAGCAGGGGA CATGTGAAGAGGAGTCACGGTTTGAGAAGCGAGTTACGAGATCAGCTACAGTTAGACAGA GAGAAGTTTCTGGAAGCTTATGCAAAACTACCACGAATGAGACTGCACTAGGAAGCAGAG GGAGGAAGGGAGATATTATTGCTCACTATACAAGGAAAGTGAGCAGTGCAGTATCTCCAA AAGGTCACCATGCTGAGCTGGGAGAATGTAATACCAGTATGGAGAATCAAACAGTGAAAC AAAAGGTGGTTGATCGAAGAGATTCAGGTGCCACTAAGAATGATAATGATGCGAATGACA CAAAGAATAAGGAATCAGAAAAGACAGAGATCAATCTGAAGACGCAACCACCTGTTGGAA GTGTTAGCATTGTAAATAAAACAACTGTAGGAGCTGTTTCTGTGGTGGGTCAGAGTATCT CTGGTTCAGCCATCACTGAGAGAAATGATACAGATCATACTGATTCTGATGGAGTTAAAT ATGAAAATATGACTCTTGTGCAGAAACTACTACTGTCTGTTGGCGCGAAGATTGTTGCCA GCAAGAAGAGGGTATTGGAAGCAGGTCCTGATAAAACCACTGGAAGGTCACCAATTGCTT TGCCATCCATGAAAAAGACAAGAAATACGTCTTCTGATCCTGAGATAGATCAACCTGATA AGTCTTCTGGAGAGAAGCTTATTGGAAATAACTGTGATTTGGGCAATAAACGTGTTTTGA GGGAACGGCAGCATCAGAATCAAACATATTTGTCAAGCAGGTCTTCTAACCAGTCTAATC AAAATGCTATCAAGCAGACACAGGATCAATCTGACGATGATGACATCAGCAGCGATACTT CCTACAGGAGAACTCGTAGCGGACGTCGTCGTGGTGCTGCCCGTCTTGCCGTGCCAAAAC AAGAGGACTCCAGTGATTCTGAAGAAGTTGTTGTTGTGAAAAAGAATCGACGGAAACGTA AGAAATCTGTGCATAAACACAGGGCTGGATCTAAGTTGAAGCATACTTCTGGTAGTCCTC CCAAAACAGGTCGTTTGGGTAGACCTCCACTTGTCAAATCTGAATGTGGCTGCTTACCTC TGCAGCCAGGAAAAGGGAAAATGAATGTGCCTGAAGGTACAGGAGCTCTACGCGAAGAAA AACAAAAAATAAGTGATCAGATAAAGGCCATGCTTCTAGATGCTGGTTGGACAATTGATT TAAGACCCAGGAATGGTAGAAACTACATGGATTCCGTGTATATACATCCTAGTGGCAAAG GGTCTTACTGGTCAGTTACAAAAGCATATTACGTGTTCCGTGCAGATATGGAATCTGAGC AGAAGGAAAGTTCTAAAGACCATATTCTGTCAAAAAAATCTGTTGGTAGCCCCGGCAAAA GGCAGGTCTCTAGTTCTTCAGGCTGTACTTTAACAGATGATATCCTTAGCAAATTAAAAA GAGTTGTTGTAAACAAACGAACAACCAAAGTAGAGATTCAAAGGTTGAG