Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d013262_T010
CDS Infomation	cds chromosome:B73_RefGen_v4:5:7377042:7382104:-1 gene:Zm00001d013262 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:topoisomerase-like enzyme1 description: topoisomerase-like enzyme1
Sequence	ATGTCGTCGCCGTCGAACAACCGTGGGACGTGCTCCCGGAGCAGCTCTGCGCGGTCCAAG CACAGCGCGCGGGTGGTGGCGCAGACGCCCGTGGACGCGCAGCTGCACGCCGATTTCGAG GGCTCCCAGCGCCACTTCGACTACTCATCCTCGGTGGGCGCCGCCAACCGCCCGTCGGCC AGCACGAGCACCGTCTCCACCTACCTCCAGAACATGCAGCGGGGCCGCTACATCCAGCCC TTCGGCTGCCTGCTCGCCGTCCACCCGGACACCTTCGCGCTGCTCGCCTACAGCGAGAAC GCGCCGGAGATGCTCGACCTCACGCCACACGCGGTCCCAACCATCGACCAGCGGGACGCG CTCACCATCGGCGCCGACGTGCGCACGCTCTTCCGCTCGCAGAGCTCCGTCGCGCTTCAC AAGGCCGCCACCTTCGGGGAGGTCAACCTGCTCAACCCCATCCTCGTGCACGCCAGGACG TCGGGGAAGCCCTTCTACGCCATATTGCACCGGATCGACGTCGGCCTTGTCATCGACCTT GAGCCGTTCAACCCAGCAGACGTGCCAGTCACGGCCGCGGGCGCGCTTAAGTCGTACAAG CTCGCCGCCAAGGCCATCTCCAGGCTGCAGTCGCTGCCCAGCGGGAACCTGTCGTTGCTG TGCGATGTGCTTGTCCGTGAGGTGAGCGAGCTCACGGGCTATGACCGGGTCATGGCGTAC AAGTTCCATGAGGATGAGCACGGTGAGGTCATTTCTGAGTGCAGGAGGTCCGATCTGGAG CCGTATCTTGGCCTGCACTACCCAGCCACCGACATCCCGCAGGCGTCCAGGTTTCTGTTT ATGAAGAACAAAATGCGGATGATATGTGATTTCTCTGCCACTCCAGTGCTGATCATTCAG GATGGCAGCCTTGCACAGCCCGTCAGCCTCTGTGGTTCTACCCTCAGGGCTTCCCATGGT TGCCATGCACAGTACATGGCAAACATGGGTTCTGTTGCATCGCTTGTGATGTCAGTCACT ATAAACGACGATGAGGAGGAAGATGGGGATACCGACAGTGACCAACAACCGAAAGGCAGG AAGCTGTGGGGGCTGGTCGTCTGCCATCATACAAGCCCGAGGTTTGTCCCTTTCCCGCTA AGGTACGCTTGCGAGTTTCTCTTGCAAGTATTTGGCATACAGCTCAGCAAGGAGGTGGAA CTGGCTGCTCAGGCAAAGGAGAGGCACATCCTCAGAACGCAAACCCTTCTTTGTGATATG CTCCTGCGGGATGCTCTTGTTGGGATATTTACCCAGTCACCTAATGTGATGGATCTAGTA AAGTGCGATGGAGCTGCATTGTATTATCAGAACCAGGTTTTGGTGCTCGGATCAACACCG TCCGAGTCAGAGATTAAGAGCATTGCCACATGGCTGCAGGAGAACCATGATGGTTCAACT GGGCTGAGTACTGACAGCTTAGTGGAAGCGGGTTATCCTGGTGCTGCTGCACTCCGTGAA GTCGTGTGTGGCATGGTGGCCATTAAGATCTCTTCCAAAAATTTTATCTTCTGGTTCCGA TCACACACAACAAAGGAGATCAAGTGGAGTGGGGCTAAGCATGAACCGTTTGACGCAGAT GACAATGGCAGGAAGATGCATCCACGATCTTCATTCAAGGCCTTCTTGGAGGTGGTTAAA TGGAGAAGTGTTCCCTGGGAGGATGTTGAAATGGATGCTATCCATTCTTTGCAGTTAATA TTACGTGACTCCCTGCAAGGTGAAGATGCCAACAGAAACAACATCAGGTCCATTGTAAAA GCTCCATCTGATGATATGAAGAAGTTACAGGGGCTACTTGAACTAAGAACAGTTACAAAC GAGATGGTCCGCTTAATTGAGACAGCAACTGCCCCTGTCTTGGCTGTTGACATTGCCGGT AACATAAATGGATGGAACAAAAAAGCTGCAGAACTAACAGGGTTACCTGTAATGGAAGCC ATAGGGAGGCCTCTGATAGATCTTGTTGTTGCTGATTCTGTTGAAGTGGTTAAGCAGATT TTGGACTCAGCTTTACAAGGAATTGAAGAGCAAAATCTGGAAATCAAGCTTAAAACATTC CATGAACAGGAGTGTTGTGGTCCAGTTATCTTGATGATTAACTCCTGCTGTAGTCGGGAT CTTTCAGAGAAAGTCATTGGAGTTTGCTTTGTAGCACAAGATTTGACCAGGCAGAAGATG ATTATGGATAAGTATACTAGGATACAAGGAGACTATGTTGCCATAATAAAGAACCCCAGT GAGCTCATCCCTCCCATATTTATGATCAATGATCTTGGTTCCTGCTTAGAGTGGAATAAA GCTATGCAGAAGATTACTGGTATGAAGAGGGAAGACGCGATAAATAAGTTGTTAATTGGG GAGGTCTTCACGCTCCATGATTATGGCTGTAGGGTGAAAGATCATGCTACTCTAACGAAA CTTAGCATACTGATGAATGCAGTGATTTCTGGTCAGGATCCAGAGAAGCTCCTGTTTGGT TTCTTCGGCACAGGTGGGAAGTATATTGAATCCTTGCTGACAGTGAACAAGAGAACAAAT GCTGAGGGTAAAATCACTGGCGCTCTTTGCTTTCTGCATGTGGCTAGCCCAGAGCTTCAG CATGCTCTTGAGGTCCAGAAAATGTCTGAACAAGCTGCTACAAACAGCTTTAAAGAATTA ACTTACATTCGTCAAGAATTAAGGAACCCACTCAATGGCATGCAATTTACTTATAACTTA TTGAAGCCTTCCGAATTGACAGAGGATCAGCGGCAACTTGTTTCATCTAATGTTCTGTGT CAGGACCAGCTGAAAAAGATTTTACATGACACTGATCTTGAAAGCATTGAACACTATATG GAGACGAACACAGTAGAGTTCAACCTTGAGGAAGCTCTGAATACGGTCCTGATGCAAGGC ATTCCTTTGGGCAAGGAAAAACGTATTTCTATTGAACGTGATTGGCCTGTGGAAGTGTCA CACATGTACATTTACGGGGACAATATAAGGCTTCAGCAGGTCCTAGCAGATTATCTGGCT TGCGCCCTTCAATTCACACAACCAGCTGAAGGACATATCGTGCTCCAGGTCATTCCCAAG AAGGAAAACATTGGGTCTGGCATGCAGATTGCTCATTTGGAATTCAGGATTGTCCATCCA GCTCCAGGCGTTCCAGAGGCCCTGATACAGGAGATGTTCCAGCACAACCCAGGGGTGTCC AGGGAGGGTCTCGGCCTGTACATAAGCCAGAAGCTGGTGAAAACGATGAGCGGCACGTTG CAGTACCTACGAGAAGCCGACACCTCTTCGTTCATCATCCTGATAGAGTTCCCGGTCGCC CAGCTCAGCAGCAAGCGGTCCAAGCCTTCGCCAAGTAAATTCTGA

Peptide Sequence

PEP ID	Zm00001d013262_P010
PEP Infomation	pep chromosome:B73_RefGen_v4:5:7377042:7382104:-1 gene:Zm00001d013262 transcript:Zm00001d013262_T010 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:topoisomerase-like enzyme1 description: topoisomerase-like enzyme1
Sequence	MSSPSNNRGTCSRSSSARSKHSARVVAQTPVDAQLHADFEGSQRHFDYSSSVGAANRPSA STSTVSTYLQNMQRGRYIQPFGCLLAVHPDTFALLAYSENAPEMLDLTPHAVPTIDQRDA LTIGADVRTLFRSQSSVALHKAATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDL EPFNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAY KFHEDEHGEVISECRRSDLEPYLGLHYPATDIPQASRFLFMKNKMRMICDFSATPVLIIQ DGSLAQPVSLCGSTLRASHGCHAQYMANMGSVASLVMSVTINDDEEEDGDTDSDQQPKGR KLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLSKEVELAAQAKERHILRTQTLLCDM LLRDALVGIFTQSPNVMDLVKCDGAALYYQNQVLVLGSTPSESEIKSIATWLQENHDGST GLSTDSLVEAGYPGAAALREVVCGMVAIKISSKNFIFWFRSHTTKEIKWSGAKHEPFDAD DNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRDSLQGEDANRNNIRSIVK APSDDMKKLQGLLELRTVTNEMVRLIETATAPVLAVDIAGNINGWNKKAAELTGLPVMEA IGRPLIDLVVADSVEVVKQILDSALQGIEEQNLEIKLKTFHEQECCGPVILMINSCCSRD LSEKVIGVCFVAQDLTRQKMIMDKYTRIQGDYVAIIKNPSELIPPIFMINDLGSCLEWNK AMQKITGMKREDAINKLLIGEVFTLHDYGCRVKDHATLTKLSILMNAVISGQDPEKLLFG FFGTGGKYIESLLTVNKRTNAEGKITGALCFLHVASPELQHALEVQKMSEQAATNSFKEL TYIRQELRNPLNGMQFTYNLLKPSELTEDQRQLVSSNVLCQDQLKKILHDTDLESIEHYM ETNTVEFNLEEALNTVLMQGIPLGKEKRISIERDWPVEVSHMYIYGDNIRLQQVLADYLA CALQFTQPAEGHIVLQVIPKKENIGSGMQIAHLEFRIVHPAPGVPEALIQEMFQHNPGVS REGLGLYISQKLVKTMSGTLQYLREADTSSFIILIEFPVAQLSSKRSKPSPSKF

Transcript Sequence

Transcript ID	Zm00001d013262_T010
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:7377042:7382104:-1 gene:Zm00001d013262 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:topoisomerase-like enzyme1 description: topoisomerase-like enzyme1
Sequence	CGCGCCCCTTGACTACATGCGCCGGCGTCTTCTTCCCAGGCCCAGGGACGGTAGTCATTC GCGCACGCCGCATTGCAGTTGCTCCCTTCGGTTTCTTTCGTGTTCCCCCTCCTCAAGAGC AGGGCAACGCCCAAGAGTATCGTCGCTGCCGCTGCCGCTGCCTCGCCCGCGCGCAGGCCG CTCGCTGAAATTCCCTCTTCTTCCTCAGTGCTTATCCGCGGCGGAATCCAATCACCTCCC TCATCACGTCCTTCTCCCGAGCAAAGCCTCCCCTCGCTTTTGGCGTATGCCCCCGCTGGC GCGCCCATGATTCCCGCCGATTCCTCCGCCCGTTCGGTCCAGCAAACCTTGCTGCTGCTG CTGCGCTGCGGCTAGTTCGGTGGCGGGGAAAGAGGAGGAGGGATCTTGGAGTAGGGCGAA GCGGAAATGTCGTCGCCGTCGAACAACCGTGGGACGTGCTCCCGGAGCAGCTCTGCGCGG TCCAAGCACAGCGCGCGGGTGGTGGCGCAGACGCCCGTGGACGCGCAGCTGCACGCCGAT TTCGAGGGCTCCCAGCGCCACTTCGACTACTCATCCTCGGTGGGCGCCGCCAACCGCCCG TCGGCCAGCACGAGCACCGTCTCCACCTACCTCCAGAACATGCAGCGGGGCCGCTACATC CAGCCCTTCGGCTGCCTGCTCGCCGTCCACCCGGACACCTTCGCGCTGCTCGCCTACAGC GAGAACGCGCCGGAGATGCTCGACCTCACGCCACACGCGGTCCCAACCATCGACCAGCGG GACGCGCTCACCATCGGCGCCGACGTGCGCACGCTCTTCCGCTCGCAGAGCTCCGTCGCG CTTCACAAGGCCGCCACCTTCGGGGAGGTCAACCTGCTCAACCCCATCCTCGTGCACGCC AGGACGTCGGGGAAGCCCTTCTACGCCATATTGCACCGGATCGACGTCGGCCTTGTCATC GACCTTGAGCCGTTCAACCCAGCAGACGTGCCAGTCACGGCCGCGGGCGCGCTTAAGTCG TACAAGCTCGCCGCCAAGGCCATCTCCAGGCTGCAGTCGCTGCCCAGCGGGAACCTGTCG TTGCTGTGCGATGTGCTTGTCCGTGAGGTGAGCGAGCTCACGGGCTATGACCGGGTCATG GCGTACAAGTTCCATGAGGATGAGCACGGTGAGGTCATTTCTGAGTGCAGGAGGTCCGAT CTGGAGCCGTATCTTGGCCTGCACTACCCAGCCACCGACATCCCGCAGGCGTCCAGGTTT CTGTTTATGAAGAACAAAATGCGGATGATATGTGATTTCTCTGCCACTCCAGTGCTGATC ATTCAGGATGGCAGCCTTGCACAGCCCGTCAGCCTCTGTGGTTCTACCCTCAGGGCTTCC CATGGTTGCCATGCACAGTACATGGCAAACATGGGTTCTGTTGCATCGCTTGTGATGTCA GTCACTATAAACGACGATGAGGAGGAAGATGGGGATACCGACAGTGACCAACAACCGAAA GGCAGGAAGCTGTGGGGGCTGGTCGTCTGCCATCATACAAGCCCGAGGTTTGTCCCTTTC CCGCTAAGGTACGCTTGCGAGTTTCTCTTGCAAGTATTTGGCATACAGCTCAGCAAGGAG GTGGAACTGGCTGCTCAGGCAAAGGAGAGGCACATCCTCAGAACGCAAACCCTTCTTTGT GATATGCTCCTGCGGGATGCTCTTGTTGGGATATTTACCCAGTCACCTAATGTGATGGAT CTAGTAAAGTGCGATGGAGCTGCATTGTATTATCAGAACCAGGTTTTGGTGCTCGGATCA ACACCGTCCGAGTCAGAGATTAAGAGCATTGCCACATGGCTGCAGGAGAACCATGATGGT TCAACTGGGCTGAGTACTGACAGCTTAGTGGAAGCGGGTTATCCTGGTGCTGCTGCACTC CGTGAAGTCGTGTGTGGCATGGTGGCCATTAAGATCTCTTCCAAAAATTTTATCTTCTGG TTCCGATCACACACAACAAAGGAGATCAAGTGGAGTGGGGCTAAGCATGAACCGTTTGAC GCAGATGACAATGGCAGGAAGATGCATCCACGATCTTCATTCAAGGCCTTCTTGGAGGTG GTTAAATGGAGAAGTGTTCCCTGGGAGGATGTTGAAATGGATGCTATCCATTCTTTGCAG TTAATATTACGTGACTCCCTGCAAGGTGAAGATGCCAACAGAAACAACATCAGGTCCATT GTAAAAGCTCCATCTGATGATATGAAGAAGTTACAGGGGCTACTTGAACTAAGAACAGTT ACAAACGAGATGGTCCGCTTAATTGAGACAGCAACTGCCCCTGTCTTGGCTGTTGACATT GCCGGTAACATAAATGGATGGAACAAAAAAGCTGCAGAACTAACAGGGTTACCTGTAATG GAAGCCATAGGGAGGCCTCTGATAGATCTTGTTGTTGCTGATTCTGTTGAAGTGGTTAAG CAGATTTTGGACTCAGCTTTACAAGGAATTGAAGAGCAAAATCTGGAAATCAAGCTTAAA ACATTCCATGAACAGGAGTGTTGTGGTCCAGTTATCTTGATGATTAACTCCTGCTGTAGT CGGGATCTTTCAGAGAAAGTCATTGGAGTTTGCTTTGTAGCACAAGATTTGACCAGGCAG AAGATGATTATGGATAAGTATACTAGGATACAAGGAGACTATGTTGCCATAATAAAGAAC CCCAGTGAGCTCATCCCTCCCATATTTATGATCAATGATCTTGGTTCCTGCTTAGAGTGG AATAAAGCTATGCAGAAGATTACTGGTATGAAGAGGGAAGACGCGATAAATAAGTTGTTA ATTGGGGAGGTCTTCACGCTCCATGATTATGGCTGTAGGGTGAAAGATCATGCTACTCTA ACGAAACTTAGCATACTGATGAATGCAGTGATTTCTGGTCAGGATCCAGAGAAGCTCCTG TTTGGTTTCTTCGGCACAGGTGGGAAGTATATTGAATCCTTGCTGACAGTGAACAAGAGA ACAAATGCTGAGGGTAAAATCACTGGCGCTCTTTGCTTTCTGCATGTGGCTAGCCCAGAG CTTCAGCATGCTCTTGAGGTCCAGAAAATGTCTGAACAAGCTGCTACAAACAGCTTTAAA GAATTAACTTACATTCGTCAAGAATTAAGGAACCCACTCAATGGCATGCAATTTACTTAT AACTTATTGAAGCCTTCCGAATTGACAGAGGATCAGCGGCAACTTGTTTCATCTAATGTT CTGTGTCAGGACCAGCTGAAAAAGATTTTACATGACACTGATCTTGAAAGCATTGAACAC TATATGGAGACGAACACAGTAGAGTTCAACCTTGAGGAAGCTCTGAATACGGTCCTGATG CAAGGCATTCCTTTGGGCAAGGAAAAACGTATTTCTATTGAACGTGATTGGCCTGTGGAA GTGTCACACATGTACATTTACGGGGACAATATAAGGCTTCAGCAGGTCCTAGCAGATTAT CTGGCTTGCGCCCTTCAATTCACACAACCAGCTGAAGGACATATCGTGCTCCAGGTCATT CCCAAGAAGGAAAACATTGGGTCTGGCATGCAGATTGCTCATTTGGAATTCAGGATTGTC CATCCAGCTCCAGGCGTTCCAGAGGCCCTGATACAGGAGATGTTCCAGCACAACCCAGGG GTGTCCAGGGAGGGTCTCGGCCTGTACATAAGCCAGAAGCTGGTGAAAACGATGAGCGGC ACGTTGCAGTACCTACGAGAAGCCGACACCTCTTCGTTCATCATCCTGATAGAGTTCCCG GTCGCCCAGCTCAGCAGCAAGCGGTCCAAGCCTTCGCCAAGTAAATTCTGACACTGATGC TCCTGGAACTGCAGTGACGGTTCGGCCGTGTCAAATTCTCGGGTGTAGGGTGTACCTCTG GCCAAGTGACTGATATTCTGAAAAACATACGGACTTCTAGTATAGGAGAAGAGGAATCCT AATCCTAGTAATTATATCTTAGTAGATATGTGCTTAGTCTCTTGTTAATTTTTTGTCTTG AGAGGACTATATATACTGATAAAGTGATAATTTATTCAGAGAATAAAG