Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d013243_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:5:6938133:6943851:-1 gene:Zm00001d013243 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cyclic nucleotide-gated ion channel 2
Sequence	ATGCCTCCGCTCGCATTCCTCCGCCGCTACCTCCCCGCGAGGCTTCTCGCGCGAGCGTGC GATGGTGGAGTCCGGGGGAGCCCGGGCGTGGCGCGGGACGAGGAGGCCGGAGGCAGCGGC GGACTGAGCGGCCGGTCGGCGGGGGCGCCGTCCGGGGAGTGCTACGCGTGCACGCAGCCC GGGGTGCCGGCGTTCCACTCCACGGCCTGCGACCAGGTGCACTCGCCGGACTGGGACGCC GACGCGGGGTCCTCGCTGGTGCCGGTCCAGGCGCAGCAGCAGGCCCAGCCGGCGGCGGCG GCGGCGCAGCACGCGGCGCGGTGGCTGTTCGGGCCCGTGCTGGACCCGCGCAGCAAGCGC GTGCAGCGCTGGAACCGCTGGATCCTGCTCGGCCGCGCCGCCGCGCTGGCGCTGGACCCG CTCTTCTTCTACGCGCTCTCCATCGGCCGCGCCGGCCGGCCCTGCCTCTACTTGGACGCC GGCCTCGCCGCCGCGGTCACCGCGCTCCGGACCTGCGCCGACGTCGCGCACCTCGCGCAC GTGCTCCTGCAGTTCCGCCTCGCCTACGTCTCCCGCGAGTCCCTCGTCGTCGGGTGCGGC AAGCTCGTCTGGGACGCCCGCGCCATCGCCGCGCACTACGCCCGCTCCGTCAAGGGCCTC TGCTTCGACCTCTTCGTCATCCTCCCCATCCCGCAGGTCATCTTCTGGTTGGTTATACCA AAGTTAATTAGGGAAGAACGTGTTAGGCTTATCATGACGATACTGCTACTCATGTTCATA TTTCAATTTCTCCCCAAGGTCTACCATAGTATACACATCATGAGGAAAATGCAGAAGGTG ACGGGTTACATCTTTGGATCGATATGGTGGGGATTTGGTTTAAATCTATTTGCCTATTTC ATTGCTTCTCATATTGCAGGTGGGTGCTGGTATGTTCTTGCAATCCAGCGCATTGCTTCC TGCCTCCAGGAAGAATGCAAGAAAAACAATAGTTGTGATCTAATATCACTAGCTTGTTCG AAGGAGATATGCTTTCACCCTCCTTGGTCTTCGAATGTTAATGGGTTCGCATGTGATACG AACATGACCTCCTTTAGTCAACGAAATGTGTCTACTTGTTTAAGTGGTAAAGGGTCGTTT GCTTATGGAATCTATTTGGGGGCTCTTCCTGTTATATCGAGCAATTCGCTTGCTGTCAAA ATTCTCTATCCTATATTTTGGGGACTCATGACACTCAGTACTTTTGGTAACGATCTTGCC CCAACAAGCAATGGTATTGAGGTGATATTCAGCATAATCAATGTCCTCAGTGGCCTGATG CTCTTCACATTGCTGATCGGAAACATACAGGTATTTCTGCACGCGGTCCTGGCAAGGAAG CGGAAGATGCAGCTGCGGTTCCGAGACATGGAATGGTGGATGAGACGGAGGCAGCTGCCG TCTCGGCTGAGGCAGAGGGTGCGCAAATATGAGCGCGAACGCTGGGCCGCCGTCACGGGA GACGAGGAGATGGAGATGATCAAGGATCTGCCTGAAGGACTGAGGCGGGACATCAAGCGC TACCTCTGCCTCGAGCTGGTTAAGCAGGTTCCGCTGTTCCATGGCATGGACGATCTGATC CTGGATAACATCTGCGACCGGCTGCGGCCACTGGTGTTCTCCAGCGGGGAGAAGGTGATC CGAGAGGGCGACCCCGTGCAGCGCATGGTGTTCATCCTGCAGGGCAAGCTCCGGAGCACG CAGCCGCTGACCAAGGGCGTGGTGGCAACGTGCATGCTAGGGGCGGGCAACTTCCTAGGC GACGAGCTGCTGTCGTGGTGCCTGCGCCGCCCCTTCGTGGACCGGCTCCCCGCGTCGTCG GCCACGTTCGAGTGCGTGGAGGCGGCGCAGGCGTTCTGCCTCGACGCGCCGGACCTGCGG TTCATCACCGAGCACTTCCGCTACAAGTTCGCCAACGAGAAGCTCAGGCGCACGGCGCGG TACTACTCGTCCAACTGGCGGACGTGGGCCGCCGTCAACATCCAGCTCGCGTGGCGCAGG TATAGGGCCCGGGCATCGACGGACCTGGCGGCGATGGCCGCGCCGCCGTTGGCGGGCGGA CCCGACGACGGGGACCGGCGGCTCAGACACTACGCGGCCATGTTCATGTCGCTCCGGCCG CATGACCACCTAGAGTGA

Peptide Sequence

PEP ID	Zm00001d013243_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:5:6938133:6943851:-1 gene:Zm00001d013243 transcript:Zm00001d013243_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cyclic nucleotide-gated ion channel 2
Sequence	MPPLAFLRRYLPARLLARACDGGVRGSPGVARDEEAGGSGGLSGRSAGAPSGECYACTQP GVPAFHSTACDQVHSPDWDADAGSSLVPVQAQQQAQPAAAAAQHAARWLFGPVLDPRSKR VQRWNRWILLGRAAALALDPLFFYALSIGRAGRPCLYLDAGLAAAVTALRTCADVAHLAH VLLQFRLAYVSRESLVVGCGKLVWDARAIAAHYARSVKGLCFDLFVILPIPQVIFWLVIP KLIREERVRLIMTILLLMFIFQFLPKVYHSIHIMRKMQKVTGYIFGSIWWGFGLNLFAYF IASHIAGGCWYVLAIQRIASCLQEECKKNNSCDLISLACSKEICFHPPWSSNVNGFACDT NMTSFSQRNVSTCLSGKGSFAYGIYLGALPVISSNSLAVKILYPIFWGLMTLSTFGNDLA PTSNGIEVIFSIINVLSGLMLFTLLIGNIQVFLHAVLARKRKMQLRFRDMEWWMRRRQLP SRLRQRVRKYERERWAAVTGDEEMEMIKDLPEGLRRDIKRYLCLELVKQVPLFHGMDDLI LDNICDRLRPLVFSSGEKVIREGDPVQRMVFILQGKLRSTQPLTKGVVATCMLGAGNFLG DELLSWCLRRPFVDRLPASSATFECVEAAQAFCLDAPDLRFITEHFRYKFANEKLRRTAR YYSSNWRTWAAVNIQLAWRRYRARASTDLAAMAAPPLAGGPDDGDRRLRHYAAMFMSLRP HDHLE

Transcript Sequence

Transcript ID	Zm00001d013243_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:6938133:6943851:-1 gene:Zm00001d013243 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cyclic nucleotide-gated ion channel 2
Sequence	CGATCGCCAGGCGCCAGCAGCAGGCTAGCTCTGCTCCGCCGCTCACTGCTCGCTAGCTAC TGGACCGCGCTTCCCTCTCTCCATCGCGCCGGCGCGCACGGCTAGCTCTAGCTCCCGGAG CCGCCCTTTCATGGTCCCCGCCGTGGTCGGGACGAGATGCCTCCGCTCGCATTCCTCCGC CGCTACCTCCCCGCGAGGCTTCTCGCGCGAGCGTGCGATGGTGGAGTCCGGGGGAGCCCG GGCGTGGCGCGGGACGAGGAGGCCGGAGGCAGCGGCGGACTGAGCGGCCGGTCGGCGGGG GCGCCGTCCGGGGAGTGCTACGCGTGCACGCAGCCCGGGGTGCCGGCGTTCCACTCCACG GCCTGCGACCAGGTGCACTCGCCGGACTGGGACGCCGACGCGGGGTCCTCGCTGGTGCCG GTCCAGGCGCAGCAGCAGGCCCAGCCGGCGGCGGCGGCGGCGCAGCACGCGGCGCGGTGG CTGTTCGGGCCCGTGCTGGACCCGCGCAGCAAGCGCGTGCAGCGCTGGAACCGCTGGATC CTGCTCGGCCGCGCCGCCGCGCTGGCGCTGGACCCGCTCTTCTTCTACGCGCTCTCCATC GGCCGCGCCGGCCGGCCCTGCCTCTACTTGGACGCCGGCCTCGCCGCCGCGGTCACCGCG CTCCGGACCTGCGCCGACGTCGCGCACCTCGCGCACGTGCTCCTGCAGTTCCGCCTCGCC TACGTCTCCCGCGAGTCCCTCGTCGTCGGGTGCGGCAAGCTCGTCTGGGACGCCCGCGCC ATCGCCGCGCACTACGCCCGCTCCGTCAAGGGCCTCTGCTTCGACCTCTTCGTCATCCTC CCCATCCCGCAGGTCATCTTCTGGTTGGTTATACCAAAGTTAATTAGGGAAGAACGTGTT AGGCTTATCATGACGATACTGCTACTCATGTTCATATTTCAATTTCTCCCCAAGGTCTAC CATAGTATACACATCATGAGGAAAATGCAGAAGGTGACGGGTTACATCTTTGGATCGATA TGGTGGGGATTTGGTTTAAATCTATTTGCCTATTTCATTGCTTCTCATATTGCAGGTGGG TGCTGGTATGTTCTTGCAATCCAGCGCATTGCTTCCTGCCTCCAGGAAGAATGCAAGAAA AACAATAGTTGTGATCTAATATCACTAGCTTGTTCGAAGGAGATATGCTTTCACCCTCCT TGGTCTTCGAATGTTAATGGGTTCGCATGTGATACGAACATGACCTCCTTTAGTCAACGA AATGTGTCTACTTGTTTAAGTGGTAAAGGGTCGTTTGCTTATGGAATCTATTTGGGGGCT CTTCCTGTTATATCGAGCAATTCGCTTGCTGTCAAAATTCTCTATCCTATATTTTGGGGA CTCATGACACTCAGTACTTTTGGTAACGATCTTGCCCCAACAAGCAATGGTATTGAGGTG ATATTCAGCATAATCAATGTCCTCAGTGGCCTGATGCTCTTCACATTGCTGATCGGAAAC ATACAGGTATTTCTGCACGCGGTCCTGGCAAGGAAGCGGAAGATGCAGCTGCGGTTCCGA GACATGGAATGGTGGATGAGACGGAGGCAGCTGCCGTCTCGGCTGAGGCAGAGGGTGCGC AAATATGAGCGCGAACGCTGGGCCGCCGTCACGGGAGACGAGGAGATGGAGATGATCAAG GATCTGCCTGAAGGACTGAGGCGGGACATCAAGCGCTACCTCTGCCTCGAGCTGGTTAAG CAGGTTCCGCTGTTCCATGGCATGGACGATCTGATCCTGGATAACATCTGCGACCGGCTG CGGCCACTGGTGTTCTCCAGCGGGGAGAAGGTGATCCGAGAGGGCGACCCCGTGCAGCGC ATGGTGTTCATCCTGCAGGGCAAGCTCCGGAGCACGCAGCCGCTGACCAAGGGCGTGGTG GCAACGTGCATGCTAGGGGCGGGCAACTTCCTAGGCGACGAGCTGCTGTCGTGGTGCCTG CGCCGCCCCTTCGTGGACCGGCTCCCCGCGTCGTCGGCCACGTTCGAGTGCGTGGAGGCG GCGCAGGCGTTCTGCCTCGACGCGCCGGACCTGCGGTTCATCACCGAGCACTTCCGCTAC AAGTTCGCCAACGAGAAGCTCAGGCGCACGGCGCGGTACTACTCGTCCAACTGGCGGACG TGGGCCGCCGTCAACATCCAGCTCGCGTGGCGCAGGTATAGGGCCCGGGCATCGACGGAC CTGGCGGCGATGGCCGCGCCGCCGTTGGCGGGCGGACCCGACGACGGGGACCGGCGGCTC AGACACTACGCGGCCATGTTCATGTCGCTCCGGCCGCATGACCACCTAGAGTGATCAGGA GGGGGGACGGGACCATCCTAGCTGTGCCGGCCGGGTCATGGTGTCTGTACAGTGTACACT AGTGGTATGTTGTTGTCATCTTCTGCGTGAGTGAACTGGTGGTTCGGGATTTGTCATTTA AAGAAGGTCAATAATGGAGAAATAGTTTCTTAGCCCGATTCAATTGTCTTCCTTTCACCA AGAATAAAAATTACTTCTGC