Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d013241_T011
CDS Infomation	cds chromosome:B73_RefGen_v4:5:6896999:6901809:-1 gene:Zm00001d013241 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence	ATGGGTACATTTACTGCCCCCGTCTCTATTCCTCAAATAGACAATCCTTCAATTGTCTCC CCGATGGGTTCTTGCACAGCAGACCCAAGGAGCAGCGTTATCAATAATCCTGCTTTAATT CCAAGATTCAATGGGTTCTCAACTGTGAATTCGTACACCAGTCTTAGTGCTGTGACGCAG AGCATTGGAACTTCAATCCCAAAGCTGATAAATGTGGATAATGTAGATAAACGCTATCGT GGTTTTCCACTTGATTCGTTTTCCGTGTCTCACTCACGACATCAGGTAGCAGTTTCAAGT AACCTGGAGCAAAAGAATTCCCAGAAGTTGGAAGATTCAGATCAACAGTCCCATGGCAAG GGTATGAAGAACTTCAATTTGAATGAGACACTGTCAGATTGTCAGGAAGATGGTCTTGTA GAACAAGATGGGAGATGTGCTTCCAGTTTTCAGCATGATAAAGATGGGGGGTCAGTACTT GGGATCTCTTGGCTCAAAAAAAAACTTATGTCTGCTGACCCAACAGCTGTGGAGAAGCCA GGGAAGATTTTTGGACATTCATTGGGAACTGCAATAGAGCTGAAAAATACTAAAGACCAG AATGAACCAGCTGTGACTATTCGGAATTTGTCAGATTCTGCTTCTACATCTGTTGGCTGT GCAATTAAGAAGGATAGGCCTTCGGATAACATTGTTACCGGAACTCTGCCTGTCTGTAAT AAAGCCCAAGAGGGTGCTACATGTTTACCTCTTTCGTGCCAGAAGCATGTGCCTAAAGAT GGACAAGCCGCTGAAGGAGCCACCAAGAAAAGTGGCGCCCCCATCAGGAACTTCATCGAT CTCAATGATGATGTACCAAATGATGACAATTCTGAGGAATCAGTAGTGTCACACGAATGC CACGTGGAACCTTCACGGAACAACCATCCTAAACGAGCATTTGTGATTGATTTAGAGGTG CCGGCCTGTGAAGAGGACGCTTCGTGGGATATTGATCAAGAATGCGCGCAGCCGAAACCT GATGCGTACCAGGAAGTTGACGACGGATCTGATACATCCGCTCTAGCTGCAGCCGAGAAC ATCGTAGCGTTGTCAAGGAATACGCCAACAGCCGCAGAGGCATCGGACGATACGTTGCAG TGGTTTGCAGATCTCGCTGTATTAAACATCAACGACCTTGCTGAGCAAGCTGAACTCCAA GCTTGTACGAATGATTCCAGTAACTACGAGTCGGATTCATTCGAGTCCTTGACACTGAAG CTGGAAGAGACCAAGATCGACGATCTCTGGAGCAGGCCACTGGAACCTGAAACCGCAACC GATGAACAGACAGTTTCAGCTGCTCACCTTCTCACCAAGCCCAGAAGGGGCCAGCAAAGG AGACGGCGGCAGAAGCGAGATTTCCAGAGAGATGTCTTGCCTGGCCTTTCGTCGCTTTCC CGGCCTGAGATCACAGAGGACGTCCAGTTGCTCGAGGGGTTAGTCCAGGCTTCCGGGGGA TCCTGGGAGTCGAGCTTGACTAGGCGAGGACGTTGTGGTGGGCGTGCTAGAGGCAGGAAA CCTCGGAAAACTGTAGTAACCGTAATTGTAGAGGAGGAGGAAGAGGAGGAGGTAGAGGTT AGCCCACCGCCAAAACCTGCTGGCACTGGGGAATTGGAAGCCGATGGCAGGGGTATGATC GGGTGGGGCAGAACAACAAGGCGGTGTCGCAGAGCGAGATGTCCGTCAGGTAACAGCATG GCTACTGCGTCTTGA

Peptide Sequence

PEP ID	Zm00001d013241_P011
PEP Infomation	pep chromosome:B73_RefGen_v4:5:6896999:6901809:-1 gene:Zm00001d013241 transcript:Zm00001d013241_T011 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence	MGTFTAPVSIPQIDNPSIVSPMGSCTADPRSSVINNPALIPRFNGFSTVNSYTSLSAVTQ SIGTSIPKLINVDNVDKRYRGFPLDSFSVSHSRHQVAVSSNLEQKNSQKLEDSDQQSHGK GMKNFNLNETLSDCQEDGLVEQDGRCASSFQHDKDGGSVLGISWLKKKLMSADPTAVEKP GKIFGHSLGTAIELKNTKDQNEPAVTIRNLSDSASTSVGCAIKKDRPSDNIVTGTLPVCN KAQEGATCLPLSCQKHVPKDGQAAEGATKKSGAPIRNFIDLNDDVPNDDNSEESVVSHEC HVEPSRNNHPKRAFVIDLEVPACEEDASWDIDQECAQPKPDAYQEVDDGSDTSALAAAEN IVALSRNTPTAAEASDDTLQWFADLAVLNINDLAEQAELQACTNDSSNYESDSFESLTLK LEETKIDDLWSRPLEPETATDEQTVSAAHLLTKPRRGQQRRRRQKRDFQRDVLPGLSSLS RPEITEDVQLLEGLVQASGGSWESSLTRRGRCGGRARGRKPRKTVVTVIVEEEEEEEVEV SPPPKPAGTGELEADGRGMIGWGRTTRRCRRARCPSGNSMATAS

Transcript Sequence

Transcript ID	Zm00001d013241_T011
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:6896999:6901809:-1 gene:Zm00001d013241 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence	GAATTAACACTTAACAAGTAGTATCTGTTCATTACTGAGTTCATGTTTTAGTGCCCTTTG TAATTGGCAATTGAATTGCAATTGGAGTTAGGCATGTGTAACTGAAATGTGCAAACTGCC ACAATAAAGTTGTGACATCCAGCTGACGGAAAGTTTGTCTTTTCGTGCATATACTCTCAG TAATCATCACTAAATTTATCAGGACTTAGGAGTTGGTGTTCTCTTGTAAGCTGCCAATTT ATTTGTTTCTTATGTCAACCTATGAATAATGCACACTTGTCTTCTTCCACAATTAGGCCA TTATTGCAGAATCTTTTCTGTGATCTATTGTATTTATTATTCCATTGAGGGTTTGATTCA CTGGTCTCTTGCACAGTTTTGCAACAAGAATGGGGGCAAAAGTAGAACGGGAAAGTTATA TGCCTGGATATTATGCCACGGGGGATCTCAATTTGGAACCAAATGGTAGATGGTCTCCAT ACTATGAGGAGATGACATCAAATGATCAGTTATGCAATGGCTTCACAACAAAACCAACAA ATGACTATTCAGAATTTGACAAAGAAATACTCAAGCATCAAATACTTGAACATGAAGCTG TGTTTAGACAACAGGTGTATGAACTGCACCGAGTTTACAAAATACAGAAGGATATGATGA AACAACATCAAAGCAAAGAGGTATATTCATACCCAACTTTGGCAGTTGCATCACATACAA ATTCACCATCACAAGTGCCACAAAACGGTGCAAAGATGATGTGGCAGATGCCAGTTCCTC CAATGTCCACAACATACAGGAAAGCTATTGGAGAGCATAATGATACAAACCAGTCCTCCA TGAAGTTCCTTAGAGAAGGCAGTGTGCAGTCCTCACCAAATGGATTTATATCAAGTGATG TTGGTCCAAGAAGCAGACAAGGCACTTTTGACCTTCAACTTCCAGCTGATCATTATATAG ATGACGATGGCACATCAGATAACAAGCCCATAGATTTCCTTGGTTTGGCATCAGATACAA AACCCCGGAATGATGCTGAGCTTACATTAGTTAGTGCAGAAGGCTTGGGCAAGTTCAGTG ATAATAGTTCATCCTCGGGTTTGCAGACTACAAATAATCTTGGACCCCGGCAGGTTACCG ACCTGAATGAATCAAATACTGGCTTCCATATGGGTAGAGCAAATGGATCAGTTTCCAGAG GCCTTCCGCGTACCCTTGAGAACTCATGGAACCAACCAATATTGAGAGCAAACACAACTA ATTTCAGTTTCAGTAAAAAACACTCCAAAGAAAAGCACACAGATGAAGGTACAAGCTCAA ATTTCTTTGACACAAGTGTGAAAACAATACATGACGACAAACCATCAATCAATAAAGTTA CCATATTTGTCAGCTATGAGAACCTCCGTTCACAAATATATAACACCGTTGACTTTTTTC TAAAACTTTGACTACTTGTGTTATTAAAAAAATCTTGAGTTATCATTTATTTTGTTGTGA TTTGTTTTAACACTTAAGGTTGTTTGAGCGTGACTTGAAATTTTACATTTTTGAATAAAT ATTTTGAATAATACGATCGGTCAAAGTTTTAGAAAAAAGTCAACGACGGCATATATTTGT GAATGGAGGGAGTAGTTTGCGGTAAAAGCATATTTGTTCGGATTTCGGGAGGAAAATGAG TTTATCTATACTGTGACTCATACAGTCCTGGTAACACGGTTAACAAACGGACATAACGTG CAAACTGTATCTTTTTACTATTTACCTTAACCATGTGAGTTCTTTTATTTGGTTCTGGAC ATCTTTTTATTCTAGCTTGCTGTAATCTACTGGATTGCAGCATGAACACCTTCATGGGTC TTAGCTTATCTTTTCACTGGTAAACAAGTCAGCAGTGTAACTTTTTTAGCACCCAGATAT AATGATGCTGACCCCCCAAAATACTTCAAAGCTGTTGATGGGAGGCCTGCCACTGCCAGT TATAACCACTTTGTTTACCAAGGTCAGAATAGTTCAGTTGGATGGATTGCACAAAGTCCT CTGGAACCTTCTGTTATCAATAATTTTGCTAGAGTTGACCGTCCACATCATTTGAATATG GGTACATTTACTGCCCCCGTCTCTATTCCTCAAATAGACAATCCTTCAATTGTCTCCCCG ATGGGTTCTTGCACAGCAGACCCAAGGAGCAGCGTTATCAATAATCCTGCTTTAATTCCA AGATTCAATGGGTTCTCAACTGTGAATTCGTACACCAGTCTTAGTGCTGTGACGCAGAGC ATTGGAACTTCAATCCCAAAGCTGATAAATGTGGATAATGTAGATAAACGCTATCGTGGT TTTCCACTTGATTCGTTTTCCGTGTCTCACTCACGACATCAGGTAGCAGTTTCAAGTAAC CTGGAGCAAAAGAATTCCCAGAAGTTGGAAGATTCAGATCAACAGTCCCATGGCAAGGGT ATGAAGAACTTCAATTTGAATGAGACACTGTCAGATTGTCAGGAAGATGGTCTTGTAGAA CAAGATGGGAGATGTGCTTCCAGTTTTCAGCATGATAAAGATGGGGGGTCAGTACTTGGG ATCTCTTGGCTCAAAAAAAAACTTATGTCTGCTGACCCAACAGCTGTGGAGAAGCCAGGG AAGATTTTTGGACATTCATTGGGAACTGCAATAGAGCTGAAAAATACTAAAGACCAGAAT GAACCAGCTGTGACTATTCGGAATTTGTCAGATTCTGCTTCTACATCTGTTGGCTGTGCA ATTAAGAAGGATAGGCCTTCGGATAACATTGTTACCGGAACTCTGCCTGTCTGTAATAAA GCCCAAGAGGGTGCTACATGTTTACCTCTTTCGTGCCAGAAGCATGTGCCTAAAGATGGA CAAGCCGCTGAAGGAGCCACCAAGAAAAGTGGCGCCCCCATCAGGAACTTCATCGATCTC AATGATGATGTACCAAATGATGACAATTCTGAGGAATCAGTAGTGTCACACGAATGCCAC GTGGAACCTTCACGGAACAACCATCCTAAACGAGCATTTGTGATTGATTTAGAGGTGCCG GCCTGTGAAGAGGACGCTTCGTGGGATATTGATCAAGAATGCGCGCAGCCGAAACCTGAT GCGTACCAGGAAGTTGACGACGGATCTGATACATCCGCTCTAGCTGCAGCCGAGAACATC GTAGCGTTGTCAAGGAATACGCCAACAGCCGCAGAGGCATCGGACGATACGTTGCAGTGG TTTGCAGATCTCGCTGTATTAAACATCAACGACCTTGCTGAGCAAGCTGAACTCCAAGCT TGTACGAATGATTCCAGTAACTACGAGTCGGATTCATTCGAGTCCTTGACACTGAAGCTG GAAGAGACCAAGATCGACGATCTCTGGAGCAGGCCACTGGAACCTGAAACCGCAACCGAT GAACAGACAGTTTCAGCTGCTCACCTTCTCACCAAGCCCAGAAGGGGCCAGCAAAGGAGA CGGCGGCAGAAGCGAGATTTCCAGAGAGATGTCTTGCCTGGCCTTTCGTCGCTTTCCCGG CCTGAGATCACAGAGGACGTCCAGTTGCTCGAGGGGTTAGTCCAGGCTTCCGGGGGATCC TGGGAGTCGAGCTTGACTAGGCGAGGACGTTGTGGTGGGCGTGCTAGAGGCAGGAAACCT CGGAAAACTGTAGTAACCGTAATTGTAGAGGAGGAGGAAGAGGAGGAGGTAGAGGTTAGC CCACCGCCAAAACCTGCTGGCACTGGGGAATTGGAAGCCGATGGCAGGGGTATGATCGGG TGGGGCAGAACAACAAGGCGGTGTCGCAGAGCGAGATGTCCGTCAGGTAACAGCATGGCT ACTGCGTCTTGAGTGGGAGGGTATTTCTTGGCAGCAAGCATTGGACCTGATTAGGTACTG GGTGGTTCACAATTGTTGTATTGACTCCGATGGATGGGCTGGTGGTATAAGGTGATCACA CTCATATGAGTGTCGGCCTACTGGTCTCAGCACAACTTTCGTGCTTTTGGGTCGAAACAT GGTTTACGTTCTTATAATAAGTTCGGTAAATTAGCTGGCGAGACATTTCTGCGACAGCAT TGTACTAAGCTGTTCCAGGTTATGAGGCCCGGTGCCCCGGTATATATTCATTGTGAGAAA AACTGCAATGCATGTAAACCACCTTGATCTCTGAAGAATAGCTCATCACATGTGT