Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d013217_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:6646735:6652139:1 gene:Zm00001d013217 gene_biotype:protein_coding transcript_biotype:protein_coding description:Casein kinase II subunit alpha-2
Sequence	ATGATCGGTTTCCCCCCTTGGAACTGCCTGCCTACCGGCATCGCCAAGATCGCCGCCGCG GCTGCCGTCGTCGTAGCGGCGCTCGCGTCCTCCGGGATCGCCCTCCCGCGTCCACGCGCC GCGCCGCCCCCATCGGGATTCGGCCTCCTCATGTCGAAGGCGAAGGTCTACACCGACGTC AACGTCCTGCGTCCCAAGGAGTACTGGGACTACGAGGCGCTCACCGTCCAATGGGGTGAG CAGGATGACTATGAAGTTGTCAGGAAAGTTGGAAGAGGTAAATATAGTGAGGTCTTTGAA GGCATCAATGTTAACAACAATGAGAAATGCATCATTAAGATCCTTAAGCCTGTCAAGAAA AAGAAGATCAAAAGGGAGATCAAAATACTTCAGAATCTCTGTGGAGGTCCAAACATTGTG AAATTGCTTGATATTGTCAGGGATCAGCATTCAAAGACTCCCAGTTTGATATTTGAATTC GTCAACAACACAGACTTCAAAGTTTTGTACCCCACATTGACGGATTATGACATCCGCTAC TACATATATGAGCTACTCAAGGCCCTTGATTACTGTCATTCTCAAGGCATCATGCATCGA GATGTCAAGCCCCATAATGTAATGATAGATCATGAGCTTCGAAAACTTCGGTTGATAGAC TGGGGCTTAGCTGAGTTCTACCATCCAGGCAAGGAATACAATGTCCGTGTTGCATCGAGG TATTTCAAGGGACCTGAACTCCTTGTTGATTTACAAGACTATGATTATTCTTTAGACATG TGGAGTCTTGGTTGCATGTTTGCTGGAATGATATTTCGCAAGGAACCATTCTTTTATGGC CATGACAACCATGACCAACTTGTGAAGATTGCAAAGGTCCTTGGAACAGATGGGCTGAAT TCTTATTTGAACAAGTACCACATTGAGCTGGACCCTCAACTTGAAGCTCTTGTTGGAAGG CATAGTAGAAAACCCTGGTTGAAGTTCATGAATGGTGATAACCAACATCTAGTATCACCT GAGGCCATAGATTTTCTCGATAAGCTCCTGCGCTATGATCACCAAGACAGGCTTACTGCA CGGGAAGCTATGGCACATCCCTACTTCCTTCAAGTCAGAGCTGTGGAGAACAGTAGGACG AGAGCACAATAA

Peptide Sequence

PEP ID	Zm00001d013217_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:6646735:6652139:1 gene:Zm00001d013217 transcript:Zm00001d013217_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Casein kinase II subunit alpha-2
Sequence	MIGFPPWNCLPTGIAKIAAAAAVVVAALASSGIALPRPRAAPPPSGFGLLMSKAKVYTDV NVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKK KKIKREIKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEFVNNTDFKVLYPTLTDYDIRY YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN SYLNKYHIELDPQLEALVGRHSRKPWLKFMNGDNQHLVSPEAIDFLDKLLRYDHQDRLTA REAMAHPYFLQVRAVENSRTRAQ

Transcript Sequence

Transcript ID	Zm00001d013217_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:6646735:6652139:1 gene:Zm00001d013217 gene_biotype:protein_coding transcript_biotype:protein_coding description:Casein kinase II subunit alpha-2
Sequence	CACGCAGCCACGCTAAACAAAGCCCGACGAGAGATTCGTCTCCATCTCCCCTCGTCTTCC TCCCTCCTTCAGCCCGAGGAAACCCTAGCACGTCCCGTCTCGCCTCGCCGCCGGCGATGG CCGCTGCATGATCGGTTTCCCCCCTTGGAACTGCCTGCCTACCGGCATCGCCAAGATCGC CGCCGCGGCTGCCGTCGTCGTAGCGGCGCTCGCGTCCTCCGGGATCGCCCTCCCGCGTCC ACGCGCCGCGCCGCCCCCATCGGGATTCGGCCTCCTCATGTCGAAGGCGAAGGTCTACAC CGACGTCAACGTCCTGCGTCCCAAGGAGTACTGGGACTACGAGGCGCTCACCGTCCAATG GGGTGAGCAGGATGACTATGAAGTTGTCAGGAAAGTTGGAAGAGGTAAATATAGTGAGGT CTTTGAAGGCATCAATGTTAACAACAATGAGAAATGCATCATTAAGATCCTTAAGCCTGT CAAGAAAAAGAAGATCAAAAGGGAGATCAAAATACTTCAGAATCTCTGTGGAGGTCCAAA CATTGTGAAATTGCTTGATATTGTCAGGGATCAGCATTCAAAGACTCCCAGTTTGATATT TGAATTCGTCAACAACACAGACTTCAAAGTTTTGTACCCCACATTGACGGATTATGACAT CCGCTACTACATATATGAGCTACTCAAGGCCCTTGATTACTGTCATTCTCAAGGCATCAT GCATCGAGATGTCAAGCCCCATAATGTAATGATAGATCATGAGCTTCGAAAACTTCGGTT GATAGACTGGGGCTTAGCTGAGTTCTACCATCCAGGCAAGGAATACAATGTCCGTGTTGC ATCGAGGTATTTCAAGGGACCTGAACTCCTTGTTGATTTACAAGACTATGATTATTCTTT AGACATGTGGAGTCTTGGTTGCATGTTTGCTGGAATGATATTTCGCAAGGAACCATTCTT TTATGGCCATGACAACCATGACCAACTTGTGAAGATTGCAAAGGTCCTTGGAACAGATGG GCTGAATTCTTATTTGAACAAGTACCACATTGAGCTGGACCCTCAACTTGAAGCTCTTGT TGGAAGGCATAGTAGAAAACCCTGGTTGAAGTTCATGAATGGTGATAACCAACATCTAGT ATCACCTGAGGCCATAGATTTTCTCGATAAGCTCCTGCGCTATGATCACCAAGACAGGCT TACTGCACGGGAAGCTATGGCACATCCCTACTTCCTTCAAGTCAGAGCTGTGGAGAACAG TAGGACGAGAGCACAATAATCATGGTCTGCACTCTTGAAATGGAGTTGTTGCTAGTTCGT GAAAATCATAGGCTTAAATCCATGTTCAGTATTCACATCGCTCCAGGAATCTGGGCCATG ACTCCATGGCAATGAATCAAAATAGTACGAGCCGCATCATGTGGACAACCTTGGCAGATC TTTTTATTCTTGTCTTTATTGCTGGGAGCACTGTAGCTTTAAACCTACAAGTAGTGCTTG AATGAGATGAGATTCATATCATCTCCTGTGGTGGAATGTGAAATTGTATGTGACCTTTAG ACTAATTAAAAAGTACAATACAGCGCTAAGCATACTGCTTGTATTATGTTGTGCTATTAT GTATCTACGATTCTTATTTATTTTGGGCGAT