Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d013193_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:5:6175373:6176670:1 gene:Zm00001d013193 gene_biotype:protein_coding transcript_biotype:protein_coding description:CCG-binding protein 1
Sequence

ATGCTATCTTCAACCACACTCCGACCGCCGGCGCCGGCGCCGGCGCCGGCACACCTCACC
ATCTGCTCCTCGCCCGCAGCGTGGCGGCGTGCGCCGGCGGTGCGCGCGGTGCGGAACTAC
GACTCCATCCCGAAGCGGGAGCCCTTCAGCTCCAGCCGCAGCATCCTCCACGAGTTCCTC
AGGCAGGACAAGCCCCTCATCCAGCGCACCAAGGACCAGATCACAGATTATTGCACGGCC
ATCGAAGGCGATGAGTGCTGCAGCTGTTGGGACGCTTACTTTGAACTGAATAAACTTGAG
CAAGAGCTGCCCAAAGACGAAATCGCAAGGATGGTGAAGGACTCGGAGGGTGACGTGAGG
TACCTGATAGAGAGCATCCACCATCGCTCGGATCTGCGGAAGAAGGTGGCAGAGAAGTCT
CGCAATTCAGTACCGTCAAGCTCCCAGGGTAGTAGAGCCGCAAAGCCAAGGCCGTTCCCC
GTGCCTGATGGGATACCGAAAACGCAAGAAGAGCTCGCTGAAGAAGAAGAGGCGTTGATG
CCGGAGTCTCCATACACGAGGCTGCTGAGAAGGATGGGAAGGTACCCTGATTGGTACACC
CCACGCCCTGATCATGAGACCGACTGA

Peptide Sequence

PEP ID

Zm00001d013193_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:5:6175373:6176670:1 gene:Zm00001d013193 transcript:Zm00001d013193_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:CCG-binding protein 1
Sequence

MLSSTTLRPPAPAPAPAHLTICSSPAAWRRAPAVRAVRNYDSIPKREPFSSSRSILHEFL
RQDKPLIQRTKDQITDYCTAIEGDECCSCWDAYFELNKLEQELPKDEIARMVKDSEGDVR
YLIESIHHRSDLRKKVAEKSRNSVPSSSQGSRAAKPRPFPVPDGIPKTQEELAEEEEALM
PESPYTRLLRRMGRYPDWYTPRPDHETD

Transcript Sequence

Transcript ID

Zm00001d013193_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:6175373:6176670:1 gene:Zm00001d013193 gene_biotype:protein_coding transcript_biotype:protein_coding description:CCG-binding protein 1
Sequence

GTACCCTCACCCTCTGCTTTATATACTGCCGAAGGTAATCCCGTTCGCAGTCGCAGTTCA
CCTACGCGGAAAATCACTAGTGATTCACTGAACAAAAAAAAATTACAAGAAGGAATCGAG
AGCAAATGCTATCTTCAACCACACTCCGACCGCCGGCGCCGGCGCCGGCGCCGGCACACC
TCACCATCTGCTCCTCGCCCGCAGCGTGGCGGCGTGCGCCGGCGGTGCGCGCGGTGCGGA
ACTACGACTCCATCCCGAAGCGGGAGCCCTTCAGCTCCAGCCGCAGCATCCTCCACGAGT
TCCTCAGGCAGGACAAGCCCCTCATCCAGCGCACCAAGGACCAGATCACAGATTATTGCA
CGGCCATCGAAGGCGATGAGTGCTGCAGCTGTTGGGACGCTTACTTTGAACTGAATAAAC
TTGAGCAAGAGCTGCCCAAAGACGAAATCGCAAGGATGGTGAAGGACTCGGAGGGTGACG
TGAGGTACCTGATAGAGAGCATCCACCATCGCTCGGATCTGCGGAAGAAGGTGGCAGAGA
AGTCTCGCAATTCAGTACCGTCAAGCTCCCAGGGTAGTAGAGCCGCAAAGCCAAGGCCGT
TCCCCGTGCCTGATGGGATACCGAAAACGCAAGAAGAGCTCGCTGAAGAAGAAGAGGCGT
TGATGCCGGAGTCTCCATACACGAGGCTGCTGAGAAGGATGGGAAGGTACCCTGATTGGT
ACACCCCACGCCCTGATCATGAGACCGACTGAATCGAGTTGCCCACCATCCTAGTGTCCC
TTGTGGGAGTTTTTGGAGCATGGTAATCTGAGGCTCCTTTTATGGCCTGTGGTATGTGGT
AAGATTAGATTTGTATCTATGCAGAATTGCAGATTAGGGTGTTCTTACTCTTTTCCAATT
GTACTAATGAAAACCGGTGTGTGCTTTATGCTGTAAATATGTGGTAAATAGCTGAACGTT
TTATTCGAGGTTCTGTGTACTGTTGCATCTCCGTATACCTTATTATATTATACGGAGTAT
ATAACTT