Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d013179_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:5987437:5990898:-1 gene:Zm00001d013179 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cold-regulated 413 plasma membrane protein 2
Sequence

ATGGGGAAGGGGTTCCCGTCGTACTTGGCGATGAAGACGGGGCCGGAGGGCGGCGACGGC
GCGGCGGCGGCGGCGCAGCAGGCGCTCATCGACGCGGACCTGCGGAACCTCGGCGTCGCC
GCGCGAAAGCTCGCCAACCACGCCTTCGTCCTCGGCGGCGGGTTGGGGTTCGGCACTTCC
TTCCTCAAGTGGCTGGCCTTCCTCGCCGCAGTGTATCTCTTGATATTGGACCGCACGAAC
TGGAAGACCAACATGCTGACAGCTCTCTTGGTTCCTTACATTTTCTTCACTCTGCCTAAT
GTGCTGTTTTCTCTGATCAGAGGAGAGGTGGGGAAATGGATTGCGATTATTGCTCTTATT
CTGCGCCTATTTTTTCCGCGCCACTTCCCAGATTGGTTAGAGCTTCCCGGTTCCATCATC
CTGCTCACAGCAGTCGCCCCCAGTCTGTTCGCACACACCTTCAGGGATGACCTCGTCGGT
GTCTTCATATGCCTTGCGATCGGATGCTACCTGCTCCAAGAGCACATCAGGGCGTCAGAT
GGACTCAGGAACGCCTTCAGGAAGGGCAATGGCGTGTCCAACTCCATTGGCATCCTCCTG
CTCTTCATCTACCCTGTCTGGACCGGGGTGCTGCAGATCCTGTAG

Peptide Sequence

PEP ID

Zm00001d013179_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:5987437:5990898:-1 gene:Zm00001d013179 transcript:Zm00001d013179_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cold-regulated 413 plasma membrane protein 2
Sequence

MGKGFPSYLAMKTGPEGGDGAAAAAQQALIDADLRNLGVAARKLANHAFVLGGGLGFGTS
FLKWLAFLAAVYLLILDRTNWKTNMLTALLVPYIFFTLPNVLFSLIRGEVGKWIAIIALI
LRLFFPRHFPDWLELPGSIILLTAVAPSLFAHTFRDDLVGVFICLAIGCYLLQEHIRASD
GLRNAFRKGNGVSNSIGILLLFIYPVWTGVLQIL

Transcript Sequence

Transcript ID

Zm00001d013179_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:5987437:5990898:-1 gene:Zm00001d013179 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cold-regulated 413 plasma membrane protein 2
Sequence

TTAGACATGATTAGAAACGGCTAAGCAATAACGCAAAGATTCGGCTGACAATGGGGAAGG
GGTTCCCGTCGTACTTGGCGATGAAGACGGGGCCGGAGGGCGGCGACGGCGCGGCGGCGG
CGGCGCAGCAGGCGCTCATCGACGCGGACCTGCGGAACCTCGGCGTCGCCGCGCGAAAGC
TCGCCAACCACGCCTTCGTCCTCGGCGGCGGGTTGGGGTTCGGCACTTCCTTCCTCAAGT
GGCTGGCCTTCCTCGCCGCAGTGTATCTCTTGATATTGGACCGCACGAACTGGAAGACCA
ACATGCTGACAGCTCTCTTGGTTCCTTACATTTTCTTCACTCTGCCTAATGTGCTGTTTT
CTCTGATCAGAGGAGAGGTGGGGAAATGGATTGCGATTATTGCTCTTATTCTGCGCCTAT
TTTTTCCGCGCCACTTCCCAGATTGGTTAGAGCTTCCCGGTTCCATCATCCTGCTCACAG
CAGTCGCCCCCAGTCTGTTCGCACACACCTTCAGGGATGACCTCGTCGGTGTCTTCATAT
GCCTTGCGATCGGATGCTACCTGCTCCAAGAGCACATCAGGGCGTCAGATGGACTCAGGA
ACGCCTTCAGGAAGGGCAATGGCGTGTCCAACTCCATTGGCATCCTCCTGCTCTTCATCT
ACCCTGTCTGGACCGGGGTGCTGCAGATCCTGTAGGCGCTGTTGCCTCCGTGTTCCCGTC
TGCTGTCCAGGCGTCCAGCTCCGTTGCCGTTCGTCTCTTGTGCAAATGTTTCTTCTATGG
TGATCGTGGTTCTGTGCTATCGGGATGGGATGTAGATCGAGATGTTGGCCATATTATCAG
GCGTGTAAACCCTTGCCGCTTCTGTTAAGTTGTCGCAAGTTTGAGGATGGGTGTTTATAG
CAACTACTGTATATCATTTGATGTTATTTCTGAATATGATGTCAAGCGGTGACAAATATT
GAAACATGAACCGCGCACGCTTGCTGTTGTCCTC