Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d013120_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:5101330:5122110:1 gene:Zm00001d013120 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cell differentiation Rcd1-like protein
Sequence

ATGGAGAACCCTCCACCGTCCTCCGCCGGTCCGTACTCGGCGCCCGCGCCGGCAGCGCAG
CATCAGGACGCGGCGAAGGAGGATCAGGACGTGGCGCAGCTCGTGCTCAACCTCTGCATC
CCGGAGCTCCGCGAGAAGGCCATCATCATCCTTTCCAAGAAGCGAGAAAAATGTGAAGAT
CTTGCTCTACTACTATGGCACTCTTTTGGTACAATGGCTGCACTACTCCAGGAAATTGTG
TCAATTTATCGATTACTTTCACCCCCACAATTATCTTTTGACCAATCAACTCGAGTCTGC
AATGTGCTTGTACTCCTTAAGTGTGTGGCATCACACCCTGATACTAGGATGCCATTTTTA
AATGCACAGTTTCCACTGTACCTGTACCCTTTCTTGAACACTACCTACAAAACAAGAGAA
TATGAGTTCTTGAGGATTAGTAGCCTGAGCGTGATCGGTGCTCTTGTGAAGTCCGATGAT
CATGAAGTCATTGTGAATTTGCTGTGTTCTGAAATAGTTCCTTTGTGTCTGCGTGCTATT
GAGATGGGCAGTGAACTTTCAAAAAAGGTGGCCACTTTTATTCTCCAAAAGATTATGCTT
GACGACACAGGGCTTGCGTACGTATGCGCTTCTTCTGAACGTTTCTGCGCTGTTGCCAAT
GTGCTAGCTCAGATGGTCGAAGCACTTGCTGAACAGCCTTCCCCGAGGACGCTTAAGAAC
ACAATCCGCTGCTACCTCAGGCTGACAGATGATCGAAGGGCCTGCCAAGCGTTACGTGAC
TACCTCCCCATCGCGTTGAGGGACGGGACATTCAACGGCTTAATCGAGGTCGATCTCACA
GCAAGGCTATGGCTCCACCAGCTGCTGCATAACGTCATGATGTCAGACAGTGGAGGCGGC
CCTCGCCCTGCCCCGGGTCCTGTGATGGGGATGTGA

Peptide Sequence

PEP ID

Zm00001d013120_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:5101330:5122110:1 gene:Zm00001d013120 transcript:Zm00001d013120_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cell differentiation Rcd1-like protein
Sequence

MENPPPSSAGPYSAPAPAAQHQDAAKEDQDVAQLVLNLCIPELREKAIIILSKKREKCED
LALLLWHSFGTMAALLQEIVSIYRLLSPPQLSFDQSTRVCNVLVLLKCVASHPDTRMPFL
NAQFPLYLYPFLNTTYKTREYEFLRISSLSVIGALVKSDDHEVIVNLLCSEIVPLCLRAI
EMGSELSKKVATFILQKIMLDDTGLAYVCASSERFCAVANVLAQMVEALAEQPSPRTLKN
TIRCYLRLTDDRRACQALRDYLPIALRDGTFNGLIEVDLTARLWLHQLLHNVMMSDSGGG
PRPAPGPVMGM

Transcript Sequence

Transcript ID

Zm00001d013120_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:5101330:5122110:1 gene:Zm00001d013120 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cell differentiation Rcd1-like protein
Sequence

AAATAACTCGTCGGAGTCAGTACGGTGCTCTCTCCGTCTCAGCCGTCGCCAACTAATCTA
TCCCCGATCACGCGGCGAACCGCCGCAACACCACTATCACCAATCGCAATGGAGAACCCT
CCACCGTCCTCCGCCGGTCCGTACTCGGCGCCCGCGCCGGCAGCGCAGCATCAGGACGCG
GCGAAGGAGGATCAGGACGTGGCGCAGCTCGTGCTCAACCTCTGCATCCCGGAGCTCCGC
GAGAAGGCCATCATCATCCTTTCCAAGAAGCGAGAAAAATGTGAAGATCTTGCTCTACTA
CTATGGCACTCTTTTGGTACAATGGCTGCACTACTCCAGGAAATTGTGTCAATTTATCGA
TTACTTTCACCCCCACAATTATCTTTTGACCAATCAACTCGAGTCTGCAATGTGCTTGTA
CTCCTTAAGTGTGTGGCATCACACCCTGATACTAGGATGCCATTTTTAAATGCACAGTTT
CCACTGTACCTGTACCCTTTCTTGAACACTACCTACAAAACAAGAGAATATGAGTTCTTG
AGGATTAGTAGCCTGAGCGTGATCGGTGCTCTTGTGAAGTCCGATGATCATGAAGTCATT
GTGAATTTGCTGTGTTCTGAAATAGTTCCTTTGTGTCTGCGTGCTATTGAGATGGGCAGT
GAACTTTCAAAAAAGGTGGCCACTTTTATTCTCCAAAAGATTATGCTTGACGACACAGGG
CTTGCGTACGTATGCGCTTCTTCTGAACGTTTCTGCGCTGTTGCCAATGTGCTAGCTCAG
ATGGTCGAAGCACTTGCTGAACAGCCTTCCCCGAGGACGCTTAAGAACACAATCCGCTGC
TACCTCAGGCTGACAGATGATCGAAGGGCCTGCCAAGCGTTACGTGACTACCTCCCCATC
GCGTTGAGGGACGGGACATTCAACGGCTTAATCGAGGTCGATCTCACAGCAAGGCTATGG
CTCCACCAGCTGCTGCATAACGTCATGATGTCAGACAGTGGAGGCGGCCCTCGCCCTGCC
CCGGGTCCTGTGATGGGGATGTGAATGAAGCCGGTCGCCACGCCTCATCATCTGTGAAGA
TCCAAGAGCGTGCGTTGTAGCTGTAGGTAGCGAAGTAGTAACCCACAGGGAAGGGAAAGC
AATCGTGGTGGTGTTCACACCCTTTTGGAGGGAACAAACACAAACAGCTGAGCTTTGTGC
CGTTTGGATGGCGAAGAAGCAACGATAACACGCGTCTTCTTGATACAAGTCTGGCTGGCC
ATTGGTCGTTGGGATTTTGAAATGATATACAGGTAAAATTTGCACTGTG