Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d013109_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:5:4781557:4784574:-1 gene:Zm00001d013109 gene_biotype:protein_coding transcript_biotype:protein_coding description: calcium-dependent protein kinase 10
Sequence	ATGAACGGCTTCTTCCAGTCCGTGTCCACGGCGCTGTGGAAGACGCCGCAGGACAGCGAC GCGCTGCCCGCCGCCGCCGCCAATGGCCCCGGCGGCGCCAGCCCGGGCCGGTCGCAGTCG GCGCTGCCGAAGCCGGCGTCCGACGTGCACCACCACATCGCCGTGCTGAGCGAGGCCCCT GAGCCCGTCAAGATCGGCGCCTACCACTCGGAGCCGGCGCCCGCCGTGCAGAGCGAGGCC CCTGAGCCCGTCAAGATCGCCGCCTCTCACTCGGAGCCGGCGCCCATGGCCGCCAAGCCT GGCGCCGCCGCCGCCAACGCCAGCCCCAGCCCCAGCCCCAGGCCGCGTCCGCAGGTGAAG CGCGTGTCGAGCGCCGGGCTGCTGGTGGGCTCGGTGCTGAGGCGGAAGACGGAGAACCTC AAGGACAAGTACAGCCTGGGGCGGCGGCTCGGGCAGGGGCAGTTCGGCACGACGCACCTG TGCGTGGAGCGCGGCACGGGGAAGGAGCTGGCGTGCAAGTCCATCCTGAAGCGCAAGCTG GCCACCGACGACGACGTGGAGGACGTGCGGCGGGAGATCCAGATAATGCACCACCTGGCG GGCCACCCCAGCGTGGTCGCCATCCGCGGCGCGTACGAGGACGCCGTGGCCGTGCACCTC GTCATGGAGCTCTGCGGCGGCGGCGAGCTGTTCGACCGGATCGTGCGGAGGGGCCACTAC ACCGAGAGGAAGGCCGCCGAGCTCGCCCGCGTCATCGTCGGCGTCGTGGAGGCCTGCCAC TCCATGGGCGTCATGCACCGGGACCTCAAGCCCGAGAACTTCCTCTTCGCTGACCACTCG GAGGAGGCCGCTCTCAAGACCATTGACTTCGGACTCTCCATCTTCTTTCGCCCTGGCCAA ATCTTCACCGACGTCGTGGGCAGCCCTTACTACGTGGCGCCGGAGGTACTGAAGAAGAGA TACGGGCCAGAGGCGGACGTCTGGAGCGCTGGCGTAATCATCTACATCCTGCTGTGCGGA GTGCCGCCATTCTGGGCAGAGAACGAGCAGGGCATATTCGAGGAGGTTCTGCACGGGAGG CTGGACTTCGAGTCGGAGCCGTGGCCCAGCATCTCCGACGGCGCCAAGGATCTCGTGAGG AGGATGCTTGTCAGGGACCCGAGGAAGAGACTGACCGCTCACGAAGTTCTACGGCATCCG TGGGTTCAGGTCGGTGGAGTGGCTCCTGACAGGCCGCTGGACTCGGCCGTTCTGTCTCGC ATGAAGCAGTTCTCGGCTATGAATAAGCTGAAGAAGATGGCTCTTAGGGTGATCGCCGAG AACCTGTCGGAGGACGAGATCGCCGGGCTGAGGGAGATGTTCAAGATGATCGACGCGGAC AACAGCGGGCAGATCACGTTCGAGGAGCTCAAGGTTGGGCTGGAGAAGGTGGGCGCCAAC CTGCAGGAGTCGGAGATCTACGCGCTCATGCAAGCCGCGGACGTGGACAACAACGGCACG ATCGACTACGGCGAGTTCATCGCGGCCACGCTGCACCTGAACAAGGTGGAGCGGGAGGAC CACCTGTTCGCGGCGTTCCAGTACTTCGACAAGGACGGCAGCGGCTACATCACCGCCGAC GAGCTGCAGGTGGCGTGCGAGGAGTTCGGCCTGGGCGACGTCCAGCTGGAGGACTTGATC GGGGAAGTGGACCAGGACAACGACGGGCGCATAGACTACAACGAGTTCGTGGCGATGATG CAGAAGCCGACGGTGGGGGTGCTCCCGAAGAAGGCCGACCTGCAGAACAGCTTCAGTATC GGGTTCAGGGAGGCGCTCAGGATGGCCTAG

Peptide Sequence

PEP ID	Zm00001d013109_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:5:4781557:4784574:-1 gene:Zm00001d013109 transcript:Zm00001d013109_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description: calcium-dependent protein kinase 10
Sequence	MNGFFQSVSTALWKTPQDSDALPAAAANGPGGASPGRSQSALPKPASDVHHHIAVLSEAP EPVKIGAYHSEPAPAVQSEAPEPVKIAASHSEPAPMAAKPGAAAANASPSPSPRPRPQVK RVSSAGLLVGSVLRRKTENLKDKYSLGRRLGQGQFGTTHLCVERGTGKELACKSILKRKL ATDDDVEDVRREIQIMHHLAGHPSVVAIRGAYEDAVAVHLVMELCGGGELFDRIVRRGHY TERKAAELARVIVGVVEACHSMGVMHRDLKPENFLFADHSEEAALKTIDFGLSIFFRPGQ IFTDVVGSPYYVAPEVLKKRYGPEADVWSAGVIIYILLCGVPPFWAENEQGIFEEVLHGR LDFESEPWPSISDGAKDLVRRMLVRDPRKRLTAHEVLRHPWVQVGGVAPDRPLDSAVLSR MKQFSAMNKLKKMALRVIAENLSEDEIAGLREMFKMIDADNSGQITFEELKVGLEKVGAN LQESEIYALMQAADVDNNGTIDYGEFIAATLHLNKVEREDHLFAAFQYFDKDGSGYITAD ELQVACEEFGLGDVQLEDLIGEVDQDNDGRIDYNEFVAMMQKPTVGVLPKKADLQNSFSI GFREALRMA

Transcript Sequence

Transcript ID	Zm00001d013109_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:4781557:4784574:-1 gene:Zm00001d013109 gene_biotype:protein_coding transcript_biotype:protein_coding description: calcium-dependent protein kinase 10
Sequence	AGTCCTCTGTAGAGCTGGTCCTCCTACCCCTCACTTTGCCTTGAGCAATTTGGTTTCTAG CATCTGTGGGGTGGCTTGTGGGTGGTCGCCTTGGACTGCTCCTTCCTCCACCTGCCGCGC CGGCAGGGCGACGAGGTCCAAAAGCCTGGTGGGGCTCATCATCAAGAACACCGAAGCGGC CCCCAGCATCACCATGAACGGCTTCTTCCAGTCCGTGTCCACGGCGCTGTGGAAGACGCC GCAGGACAGCGACGCGCTGCCCGCCGCCGCCGCCAATGGCCCCGGCGGCGCCAGCCCGGG CCGGTCGCAGTCGGCGCTGCCGAAGCCGGCGTCCGACGTGCACCACCACATCGCCGTGCT GAGCGAGGCCCCTGAGCCCGTCAAGATCGGCGCCTACCACTCGGAGCCGGCGCCCGCCGT GCAGAGCGAGGCCCCTGAGCCCGTCAAGATCGCCGCCTCTCACTCGGAGCCGGCGCCCAT GGCCGCCAAGCCTGGCGCCGCCGCCGCCAACGCCAGCCCCAGCCCCAGCCCCAGGCCGCG TCCGCAGGTGAAGCGCGTGTCGAGCGCCGGGCTGCTGGTGGGCTCGGTGCTGAGGCGGAA GACGGAGAACCTCAAGGACAAGTACAGCCTGGGGCGGCGGCTCGGGCAGGGGCAGTTCGG CACGACGCACCTGTGCGTGGAGCGCGGCACGGGGAAGGAGCTGGCGTGCAAGTCCATCCT GAAGCGCAAGCTGGCCACCGACGACGACGTGGAGGACGTGCGGCGGGAGATCCAGATAAT GCACCACCTGGCGGGCCACCCCAGCGTGGTCGCCATCCGCGGCGCGTACGAGGACGCCGT GGCCGTGCACCTCGTCATGGAGCTCTGCGGCGGCGGCGAGCTGTTCGACCGGATCGTGCG GAGGGGCCACTACACCGAGAGGAAGGCCGCCGAGCTCGCCCGCGTCATCGTCGGCGTCGT GGAGGCCTGCCACTCCATGGGCGTCATGCACCGGGACCTCAAGCCCGAGAACTTCCTCTT CGCTGACCACTCGGAGGAGGCCGCTCTCAAGACCATTGACTTCGGACTCTCCATCTTCTT TCGCCCTGGCCAAATCTTCACCGACGTCGTGGGCAGCCCTTACTACGTGGCGCCGGAGGT ACTGAAGAAGAGATACGGGCCAGAGGCGGACGTCTGGAGCGCTGGCGTAATCATCTACAT CCTGCTGTGCGGAGTGCCGCCATTCTGGGCAGAGAACGAGCAGGGCATATTCGAGGAGGT TCTGCACGGGAGGCTGGACTTCGAGTCGGAGCCGTGGCCCAGCATCTCCGACGGCGCCAA GGATCTCGTGAGGAGGATGCTTGTCAGGGACCCGAGGAAGAGACTGACCGCTCACGAAGT TCTACGGCATCCGTGGGTTCAGGTCGGTGGAGTGGCTCCTGACAGGCCGCTGGACTCGGC CGTTCTGTCTCGCATGAAGCAGTTCTCGGCTATGAATAAGCTGAAGAAGATGGCTCTTAG GGTGATCGCCGAGAACCTGTCGGAGGACGAGATCGCCGGGCTGAGGGAGATGTTCAAGAT GATCGACGCGGACAACAGCGGGCAGATCACGTTCGAGGAGCTCAAGGTTGGGCTGGAGAA GGTGGGCGCCAACCTGCAGGAGTCGGAGATCTACGCGCTCATGCAAGCCGCGGACGTGGA CAACAACGGCACGATCGACTACGGCGAGTTCATCGCGGCCACGCTGCACCTGAACAAGGT GGAGCGGGAGGACCACCTGTTCGCGGCGTTCCAGTACTTCGACAAGGACGGCAGCGGCTA CATCACCGCCGACGAGCTGCAGGTGGCGTGCGAGGAGTTCGGCCTGGGCGACGTCCAGCT GGAGGACTTGATCGGGGAAGTGGACCAGGACAACGACGGGCGCATAGACTACAACGAGTT CGTGGCGATGATGCAGAAGCCGACGGTGGGGGTGCTCCCGAAGAAGGCCGACCTGCAGAA CAGCTTCAGTATCGGGTTCAGGGAGGCGCTCAGGATGGCCTAGACCTCTCTGTCTCTGCT CCCCTGCTGCCTGCGTGTAGGTGTAGATGATTGAATTGAGTGCATGTCAGTGCAGTTGCT GTAGAGACCACCGTAGCATAGAGAGCTGATGAGATGCGAGTTGAGGCGGGCCAGGAGACG TGTACATGTGCCATAGTCCATAGCCATACAGGCGGCCCTGCAGCGGTTTGGCTGCTTGGT T