Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d013098_T025
CDS Infomation	cds chromosome:B73_RefGen_v4:5:4695555:4700511:1 gene:Zm00001d013098 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:aldehyde oxidase2 description: aldehyde oxidase2
Sequence	ATGTGCATGTCCATCTTCTCTGCGCTTGTCAAAGCCGACAAGGCGGCCAACCGGCCAGCC CCACCGGCCGGCTTCTCCAAGCTCACTTCCTCGGAGGCTGAGAAGGCTGTCTCTGGCAAC CTGTGCCGCTGCACAGGGTACAGGCCCATCGTCGACGCCTGTAAGAGCTTCGCAGCCGAT GTTGATCTTGAGGACCTGGGCCTCAACTGCTTCTGGAAGAAGGGTGATGAGCCTGCAGAT GTCAGCAAGCTGCCAGGCTACAACAGTGGTGACGTCTGCACTTTCCCTGACTTTCTCAAA TCTGAGATCAAGTCCTCAATTCAGCAGGCTAACAGCGCTCCAGTTCCTGTTTCTGACGAT GGCTGGTACCGTCCTAGGAGCATTGACGAGCTTCACAGGTTGTTTCAATCTAGCTCCTTC GATGAAAATTCCGTGAAGATAGTGGCTTCAAACACTGGGTCTGGAGTGTACAAGGATCAG GACCTTTATGACAAGTACATTGACATCAAAGGAATCCCAGAGCTTTCAGTCATCAACAGA AGCAGCAAAGGAATTGAGCTTGGATCAGTTGTGTCCATCTCTAAAGCTATTGAGGTGCTG TCAGATGGAAATCTCGTCTTCAGAAAGATTGCTGGTCACCTGAACAAAGTGGCTTCACCG TTTGTTCGGAACACTGCAACCATAGGTGGAAACATAGTCATGGCACAAAGATTGCCATTC GCATCGGACATTGCAACCATACTACTAGCTGCAGGTTCAACAGTCACAATCCAGGTGGCT TCCAAAAGGCTGTGCTTCACTCTGGAGGAGTTCTTGCAGCAGCCTCCATGCGATTCTAGG ACCCTGCTGCTGAGCATATTTATCCCGGAATGGGGCTCAAATGATGTCACCTTTGAGACT TTCCGAGCAGCACCTCGTCCACTTGGCAATGCTGTCTCATATGTCAATTCAGCTTTCTTG GCAAGGACTTCATTGGATGCAGCATCAAAGGACCATCTCATCGAGGATATATGTCTGGCG TTCGGTGCTTATGGAGCTGATCATGCTATTAGAACTAGAAAGGTTGAGGATTACCTGAAG GGCAAAACAGTGAGCTCGTCTGTCATACTTGAAGCTGTTCGGTTGCTTAAAGGGTCTATT AAACCATCAGAAGGCTCAACACATCCTGAGTATAGAATTAGCTTGGCTGTCAGTTTCTTG TTTACCTTCCTATCCTCCCTTGCCAATAGCTTGAATGAATCTGCAAAGGTTAATGGTACC AACGAGCACTCACCAGAGAAGCAACTCAAGTTGGACATCAATGATTTGCCAATACGATCA AGACAAGAAATATTTTTCACTGATGCATATAAGCCAGTTGGCAAAGCAATTAAGAAAGCT GGGGTAGAGATCCAAGCTTCAGGTAGACAATCTTATCCCAATACACAGATAAACATGTTC ATAAGTTCACCATACCCTTTTTCTTCAGCATACTCCACAACGAAATCATTTAGTGATCCA CCCTTCTGTCATTTGCATCTTAACATTTTTAGCGCAGAAAACTCCAACAAGCTCCATCCC TTAACATTTTTAGCGCCTGCAGTTTCTCTACAAGATAACGCCTTTAATAATATTCCTTTT ACTGACACAGGGGAAGCTGTGTACGTTGATGATATCCCTGCTCCCAAAGATTGCCTCTAT GGGGCATTTATTTATAGCACACACCCTCATGCACATGTAAAGTCAATCAACTTTAAACCA TCTTTGGCTTCACAGAAGATCATCACAGTTATCACTGCAAAGGATATTCCCAGCGGTGGA CAAAATGTTGGTTATAGCTTCCCGATGATTGGAGAAGAAGCACTTTTTGCAGATCCAGTT GCTGAATTTGCTGGTCAAAATATTGGTGTTGTGATTGCTCAAACACAGAAGTATGCCTAC ATGGCGGCAAAGCAAGCCGTCATTGAGTATAGCACAGAAAATCTGCAGCCACCAATTCTG ACAATAGAAGATGCAATCGAACGAAGCAGCTTCTTCCAAACCCTCCCATTTGTAGCTCCT AAGCCAGTTGGTGATTACGACAAAGGGATGTCTGAAGCTGATCACAAGATTTTATCGGCA GAGGTAAAAATTGAATCCCAATACTTTTTCTACATGGAGCCACAAGTGGCGCTAGCTATT CCTGATGAAGATAACTGCATAACCATCTATTCTTCAACACAATTACCTGAGTCCACACAA AATGTGGTTGCAAAGTGCGTTGGCATTCCATTTCACAATGTCCGCGTAATCACCAGAAGG GTCGGAGGAGGCTTTGGTGGAAAAGCATTGAAATCAATGCATGTTGCATGTGCATGTGCA GTTGCTGCATTGAAGCTACAACGTCCAGTTCGGATGTACCTCGATCGCAAGACAGACATG ATAATGGCAGGCGGGCGGCATCCTATGAAGGTGAAGTACTCTGTTGGGTTCAAGTCAAAC GGCAAGATCACAGCCTTACATCTTGATCTTGGGATCAATGGTGGAATATCTCCAGATATG AGTCCAATGATTGCAGCACCTGTCATAGGTTCTCTCAAAAAGTACAACTGGGGCAATCTT GCATTTGACACCAAGGTCTGCAAAACAAATGTCTCATCAAAATCGTCAATGAGAGCTCCT GGAGATGCGCAGGGCTCTTTCATTGCTGAAGCCATCATCGAGCATGTTGCCTCGGCACTT TCAGCCGACACTAATACCATAAGGAGAAAGAACCTTCATGACTTTGAGAGCCTTGCAGTG TTCTTTGGAGATAGTGCATGTGAAGCTTCTACATACAGCCTTGTCACCATGTTCGATAAA TTGGCCTCCTCTCCAGAATACCAGCACCGAGCTGCAATGGTGGAACAATTCAACAGAAGC AACAAGTGGAAGAAGCGTGGCATTTCTTGTGTGCCTGTAACATATGAGGTGCAGCTTCGG CCAACTCCAGGAAAGGTGTCTATCATGAATGATGGTTCCATTGCTGTTGAGGCTGGAGGG GTTGAGCTAGGCCAAGGGTTGTGGACAAAAGTGAAGCAGATGACGGCATTCGGACTGGGA CAGCTGTGTCCTGACGGCGGTGAAAGCCTTCTAGACAAGGTGCGGGTCATCCAGGCCGAC ACATTGAGCATGATCCAAGGAGGGGTCACTGGTGGGAGCACCACTTCTGAAACTAGCTGT GAAGCAGTTCGTAAGTCGTGTGTTGCACTCGTCGAGAGGCTGAAGCCAATCAAGGAGAAT CTGGAGGCTAAAACTGGCACAGTTGAATGGAGTGCCTTGATTGCACAGGCAAGTATGGCG AGCGTTAACTTATCGGCACATGCATACTGGACCCCTGATCCAACTTTCACAAGCTATTTG AACTACGGAGCCGGCACTAGCGAGGTACCCCTTATCCAAATTGCACGATAA

Peptide Sequence

PEP ID	Zm00001d013098_P025
PEP Infomation	pep chromosome:B73_RefGen_v4:5:4695555:4700511:1 gene:Zm00001d013098 transcript:Zm00001d013098_T025 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:aldehyde oxidase2 description: aldehyde oxidase2
Sequence	MCMSIFSALVKADKAANRPAPPAGFSKLTSSEAEKAVSGNLCRCTGYRPIVDACKSFAAD VDLEDLGLNCFWKKGDEPADVSKLPGYNSGDVCTFPDFLKSEIKSSIQQANSAPVPVSDD GWYRPRSIDELHRLFQSSSFDENSVKIVASNTGSGVYKDQDLYDKYIDIKGIPELSVINR SSKGIELGSVVSISKAIEVLSDGNLVFRKIAGHLNKVASPFVRNTATIGGNIVMAQRLPF ASDIATILLAAGSTVTIQVASKRLCFTLEEFLQQPPCDSRTLLLSIFIPEWGSNDVTFET FRAAPRPLGNAVSYVNSAFLARTSLDAASKDHLIEDICLAFGAYGADHAIRTRKVEDYLK GKTVSSSVILEAVRLLKGSIKPSEGSTHPEYRISLAVSFLFTFLSSLANSLNESAKVNGT NEHSPEKQLKLDINDLPIRSRQEIFFTDAYKPVGKAIKKAGVEIQASGRQSYPNTQINMF ISSPYPFSSAYSTTKSFSDPPFCHLHLNIFSAENSNKLHPLTFLAPAVSLQDNAFNNIPF TDTGEAVYVDDIPAPKDCLYGAFIYSTHPHAHVKSINFKPSLASQKIITVITAKDIPSGG QNVGYSFPMIGEEALFADPVAEFAGQNIGVVIAQTQKYAYMAAKQAVIEYSTENLQPPIL TIEDAIERSSFFQTLPFVAPKPVGDYDKGMSEADHKILSAEVKIESQYFFYMEPQVALAI PDEDNCITIYSSTQLPESTQNVVAKCVGIPFHNVRVITRRVGGGFGGKALKSMHVACACA VAALKLQRPVRMYLDRKTDMIMAGGRHPMKVKYSVGFKSNGKITALHLDLGINGGISPDM SPMIAAPVIGSLKKYNWGNLAFDTKVCKTNVSSKSSMRAPGDAQGSFIAEAIIEHVASAL SADTNTIRRKNLHDFESLAVFFGDSACEASTYSLVTMFDKLASSPEYQHRAAMVEQFNRS NKWKKRGISCVPVTYEVQLRPTPGKVSIMNDGSIAVEAGGVELGQGLWTKVKQMTAFGLG QLCPDGGESLLDKVRVIQADTLSMIQGGVTGGSTTSETSCEAVRKSCVALVERLKPIKEN LEAKTGTVEWSALIAQASMASVNLSAHAYWTPDPTFTSYLNYGAGTSEVPLIQIAR

Transcript Sequence

Transcript ID	Zm00001d013098_T025
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:4695555:4700511:1 gene:Zm00001d013098 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:aldehyde oxidase2 description: aldehyde oxidase2
Sequence	AGGTGGCTGCGGAGCATGCGTTGTGCTTGTCTCGAAGTACGACCCAGCCACCGACGAGGT GACCGAGTTCTCAGCGAGCTCCTGCCTGACGCTGCTCCATAGCGTGGACCGGTGCTCGGT GACCACCAGCGAGGGCATTGGCAACACCAAGGATGGCTACCACCCTGTGCAGCAGCGCCT CTCCGGCTTCCACGCCTCCCAGTGCGGTTTCTGCACGCCCGGCATGTGCATGTCCATCTT CTCTGCGCTTGTCAAAGCCGACAAGGCGGCCAACCGGCCAGCCCCACCGGCCGGCTTCTC CAAGCTCACTTCCTCGGAGGCTGAGAAGGCTGTCTCTGGCAACCTGTGCCGCTGCACAGG GTACAGGCCCATCGTCGACGCCTGTAAGAGCTTCGCAGCCGATGTTGATCTTGAGGACCT GGGCCTCAACTGCTTCTGGAAGAAGGGTGATGAGCCTGCAGATGTCAGCAAGCTGCCAGG CTACAACAGTGGTGACGTCTGCACTTTCCCTGACTTTCTCAAATCTGAGATCAAGTCCTC AATTCAGCAGGCTAACAGCGCTCCAGTTCCTGTTTCTGACGATGGCTGGTACCGTCCTAG GAGCATTGACGAGCTTCACAGGTTGTTTCAATCTAGCTCCTTCGATGAAAATTCCGTGAA GATAGTGGCTTCAAACACTGGGTCTGGAGTGTACAAGGATCAGGACCTTTATGACAAGTA CATTGACATCAAAGGAATCCCAGAGCTTTCAGTCATCAACAGAAGCAGCAAAGGAATTGA GCTTGGATCAGTTGTGTCCATCTCTAAAGCTATTGAGGTGCTGTCAGATGGAAATCTCGT CTTCAGAAAGATTGCTGGTCACCTGAACAAAGTGGCTTCACCGTTTGTTCGGAACACTGC AACCATAGGTGGAAACATAGTCATGGCACAAAGATTGCCATTCGCATCGGACATTGCAAC CATACTACTAGCTGCAGGTTCAACAGTCACAATCCAGGTGGCTTCCAAAAGGCTGTGCTT CACTCTGGAGGAGTTCTTGCAGCAGCCTCCATGCGATTCTAGGACCCTGCTGCTGAGCAT ATTTATCCCGGAATGGGGCTCAAATGATGTCACCTTTGAGACTTTCCGAGCAGCACCTCG TCCACTTGGCAATGCTGTCTCATATGTCAATTCAGCTTTCTTGGCAAGGACTTCATTGGA TGCAGCATCAAAGGACCATCTCATCGAGGATATATGTCTGGCGTTCGGTGCTTATGGAGC TGATCATGCTATTAGAACTAGAAAGGTTGAGGATTACCTGAAGGGCAAAACAGTGAGCTC GTCTGTCATACTTGAAGCTGTTCGGTTGCTTAAAGGGTCTATTAAACCATCAGAAGGCTC AACACATCCTGAGTATAGAATTAGCTTGGCTGTCAGTTTCTTGTTTACCTTCCTATCCTC CCTTGCCAATAGCTTGAATGAATCTGCAAAGGTTAATGGTACCAACGAGCACTCACCAGA GAAGCAACTCAAGTTGGACATCAATGATTTGCCAATACGATCAAGACAAGAAATATTTTT CACTGATGCATATAAGCCAGTTGGCAAAGCAATTAAGAAAGCTGGGGTAGAGATCCAAGC TTCAGGTAGACAATCTTATCCCAATACACAGATAAACATGTTCATAAGTTCACCATACCC TTTTTCTTCAGCATACTCCACAACGAAATCATTTAGTGATCCACCCTTCTGTCATTTGCA TCTTAACATTTTTAGCGCAGAAAACTCCAACAAGCTCCATCCCTTAACATTTTTAGCGCC TGCAGTTTCTCTACAAGATAACGCCTTTAATAATATTCCTTTTACTGACACAGGGGAAGC TGTGTACGTTGATGATATCCCTGCTCCCAAAGATTGCCTCTATGGGGCATTTATTTATAG CACACACCCTCATGCACATGTAAAGTCAATCAACTTTAAACCATCTTTGGCTTCACAGAA GATCATCACAGTTATCACTGCAAAGGATATTCCCAGCGGTGGACAAAATGTTGGTTATAG CTTCCCGATGATTGGAGAAGAAGCACTTTTTGCAGATCCAGTTGCTGAATTTGCTGGTCA AAATATTGGTGTTGTGATTGCTCAAACACAGAAGTATGCCTACATGGCGGCAAAGCAAGC CGTCATTGAGTATAGCACAGAAAATCTGCAGCCACCAATTCTGACAATAGAAGATGCAAT CGAACGAAGCAGCTTCTTCCAAACCCTCCCATTTGTAGCTCCTAAGCCAGTTGGTGATTA CGACAAAGGGATGTCTGAAGCTGATCACAAGATTTTATCGGCAGAGGTAAAAATTGAATC CCAATACTTTTTCTACATGGAGCCACAAGTGGCGCTAGCTATTCCTGATGAAGATAACTG CATAACCATCTATTCTTCAACACAATTACCTGAGTCCACACAAAATGTGGTTGCAAAGTG CGTTGGCATTCCATTTCACAATGTCCGCGTAATCACCAGAAGGGTCGGAGGAGGCTTTGG TGGAAAAGCATTGAAATCAATGCATGTTGCATGTGCATGTGCAGTTGCTGCATTGAAGCT ACAACGTCCAGTTCGGATGTACCTCGATCGCAAGACAGACATGATAATGGCAGGCGGGCG GCATCCTATGAAGGTGAAGTACTCTGTTGGGTTCAAGTCAAACGGCAAGATCACAGCCTT ACATCTTGATCTTGGGATCAATGGTGGAATATCTCCAGATATGAGTCCAATGATTGCAGC ACCTGTCATAGGTTCTCTCAAAAAGTACAACTGGGGCAATCTTGCATTTGACACCAAGGT CTGCAAAACAAATGTCTCATCAAAATCGTCAATGAGAGCTCCTGGAGATGCGCAGGGCTC TTTCATTGCTGAAGCCATCATCGAGCATGTTGCCTCGGCACTTTCAGCCGACACTAATAC CATAAGGAGAAAGAACCTTCATGACTTTGAGAGCCTTGCAGTGTTCTTTGGAGATAGTGC ATGTGAAGCTTCTACATACAGCCTTGTCACCATGTTCGATAAATTGGCCTCCTCTCCAGA ATACCAGCACCGAGCTGCAATGGTGGAACAATTCAACAGAAGCAACAAGTGGAAGAAGCG TGGCATTTCTTGTGTGCCTGTAACATATGAGGTGCAGCTTCGGCCAACTCCAGGAAAGGT GTCTATCATGAATGATGGTTCCATTGCTGTTGAGGCTGGAGGGGTTGAGCTAGGCCAAGG GTTGTGGACAAAAGTGAAGCAGATGACGGCATTCGGACTGGGACAGCTGTGTCCTGACGG CGGTGAAAGCCTTCTAGACAAGGTGCGGGTCATCCAGGCCGACACATTGAGCATGATCCA AGGAGGGGTCACTGGTGGGAGCACCACTTCTGAAACTAGCTGTGAAGCAGTTCGTAAGTC GTGTGTTGCACTCGTCGAGAGGCTGAAGCCAATCAAGGAGAATCTGGAGGCTAAAACTGG CACAGTTGAATGGAGTGCCTTGATTGCACAGGCAAGTATGGCGAGCGTTAACTTATCGGC ACATGCATACTGGACCCCTGATCCAACTTTCACAAGCTATTTGAACTACGGAGCCGGCAC TAGCGAGGTACCCCTTATCCAAATTGCACGATAAAGCACAGCAAGCGCAGTTAGCAAGCC AAATTGGTGGAGGCTGCAGCTCAAATTCTACCCAATGCTGACACGTGATTGAGGTGGAAG GTGCATTCGTCCAAGGAGTAGGCTTCTTCACAAACGAGGAGTACGCAACCAACTCTGACG GGTTGGTCATCCACGATGGCACATGGACGTACAAGATCCCCACGGTCGACACCATCCCAA AGCAGTTCAACGTTGAGCTGATCAACAGCGCCCGTGACCAGAAGCGCGTCCTCTCTTCCA AAGCATCGGGCGAGCCTCCGCTTCTCCTAGCTTCCTCTGTGCACTGCGCAATGAGGGAGG CCATCAGGGCCGCCAGGAAGGAATTCTCGGTCTGCACTGGTCCAGCGAACTCCGCCATCA CGTTCCAGATGGACGTGCCCGCAACGATGCCTGTCGTCAAGGAGCTCTGCGGCCTGGATG TCGTGGAGAGGTACCTGGAGAGCGTGTCGGCTGCCAG